Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->ZAT2                     <---------ZAT2               <---------ANAC58        ----------->GT1               <---------ANAC58------->TEIL      <---------ANAC58    <---------At4g35610      <---------ANAC58    --------->At4g35610                                 --------->AHL20(2)   -- -------ARR11(3)     --------->At4g35610                                      <---------AHL20(2)   <- ------>ARR11(3)     <---------At4g35610                                   ------->TEIL        ------   gaacttgtgcttgtgaagcttgtagctgagatgagcctaaactgtagaaactccatagaagagataacaagaagatgaatttaaacaaacccatttatca  25415000                               --------->ARR14(2)                               <---------ARR14(2)                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)                        --------->CCA1(2)                       <---------ARR11(3)                       --------->AGP1                       --------->ARR11(3)                       <---------AGP1                                <---------O2                       --------->ARR14(3)                            --------->O2    <---------At4g35610<---------ARR14(3)                 <----------ID1    --------->At4g35610<---------ARR14(2)        --------->YAB1   <----------ID1 ------->GLK1(1)       --------->ARR14(2)        --------->AHL20(2)--------->CCA1(2)        --------- --------GLK1(1)       <-----------ARR10  --------->TOE1(2)   ---------->DOF2 <---------ZAT14 --->YAB1            ----------->ARR10  ------->TEIL    ---------->DOF2       --------->ZAT14   gatttcagcttaatttctcagacaagatctgagtatttgatgaacctgcaataaaaaaaaaagaaaaagagacgagacacttcagtacaaaaaaaaacag  25415100                                                                      --------->AHL20(2)                                                                   --------->TOE1(3)                                                                   --------->TOE2(3)                                                             <---------------AtSPL8                                                             --------------->AtSPL8                                                             <---------------AtSPL3                 <                     --------->ZAT14                        --------->ZAT14              <---------ALFIN1  --------->ICU4     <---------ZAT14 <------ZmHOX2a(2)      <---------ZAT14             --------->MYB46(3) >MYB52(1)   ---------->DOF2       --------->At4g35610 --------->At4g35610    ---------->DOF2 <------   agtaatcttgagaacaaaagcagagtagtacaagagcagatcaatatgcagaacaagagcagagtagtaccttaaattacaaaagtttcaaacaccgttt  25415200                                                                   <---------MYB46(3)                                                      ----------->RAV1(1)                                                     --------->DEAR3(1)                                                     --------->DEAR4(1)                                                     ----------->HVH21                                                     <---------ETT(1)                                                     --------->DREB2C(2)          <------ZmHOX2a(1)                                                     --------->ANAC46 <---------ANAC58                                                     --------->At1g77200      <------ZmHOX2a(1)                      --------->At4g35610           --------->DEAR3(2)<---------ANAC58 ----------DOF2 ---------->DOF2                   <---------WRKY38(1) <---------ANAC46    ----------- ---MYB52(1)----------->GT1 ---------->DOF2     <-----------HVH21 <---------AtMYB61     ---------->DOF2   ttctttaaaacatatcgataaatcagaggcaaaagagaacagatggtttcagtcaccgacacatatcagtggtcgtgtaaggaaggagaagaaagaaaat  25415300                ---------->DOF2              ----------->HVH21            <---------ANAC46            <---------ANAC55(2)  <---------ARR14(2)  <---------ARR11(3)                                                       <--------P  --------->GLK1(2)                                              <---------ZAT6  --------->ARR11(3)                                           --------->MYB52(2)  --------->ARR14(2)  ----------->GT1                      <---------MYB46(3)             --------->ZAT6 <---------GLK1(2)   --------->CCA1(2)                  ------------>MYB.PH3(2)*TSS     --------->MYB52(1) >GT1       >>>>>>>>CAMTA3 ---------->DOF2      <---------MYB46(3)       <---------ANAC55(2)    <----   caagaatcttcaacgcgtgaaagatagaaaaaagaagagttttttttggtttgttcagagtttgttagtgagaataggtaagtgagagagtaacagtagt  25415400                                                                 <---------ICU4               <---------ARR11(3)                               <---------ATHB12               --------->ARR11(3)               <-----------RAV1(1)               --------->GLK1(2)      ----------->GT1 <-------GAMYB                 <----------DOF2 ----------->GT1      <----------DOF2----------->GT1 <---------ANAC46       ---------->DOF2     <---- -----ZAT6    <---------GLK1(2)  <---------AtLEC2    ----------->GT1   ------>ZmHOX2a(1)     <-------   gttatgttatatacaagaatctttctttttgatatgcatgagttaaaaatttgtggggttaaatcactcattcctatagaaagtgactttgttttatgct  25415500                                                 --------->AHL20(2)                                                <---------YAB1                                              --------->ATHB51                                              --------->AHL20(2)                                              <--------HAHB4                                              --------->YAB1                                              -------->ATHB1                                              <---------ICU4    <----------DOF2                          <---------ATHB51  <---------YAB1                             --------->ICU4     --------->YAB1          <---------ANAC46 --------->ARR11(3)      <----------DOF2     <---------YAB1    <---------YAB1          --------->MYB59 <-----------GT1         <---------DAG2   <---------YAB1     --------->YAB1  <----------DOF2 <---------ARR11(3) ---------->DOF2  <---------ICU4         --------------->AGL15 <---------AHL20(2) -----YAB1      <----------ID1      <---------YAB1     --------->ANAC58   <-----------GT1        ---- --YAB1    ---------->DOF2          --------->ICU4     --------->ANAC58   <---------AHL20(2)    <----   tattatctttataaaaagaagacaaagctttttgcataatgtttacaattattaaacaagcacttataatagttattttctttttttattcggtatacat  25415600                                                                                                <----                                                                                                <----                                                                                                -----                                                                      --------->MYB52(1)       <-----                                                                      ---------->DOF2        <-------                                                               --------->ANAC58            <---------ANAC58                                                               --------->ANAC58            <---------ANAC58                                                            --------->LBD16               --------->ALFIN1                                                           <---------HSFB2a(2)   ----------->GT1<---- ----->ATHB51      <----------DOF2    <---------AHL20(2)  <---------LBD16       --------->ARR11(3) -----YAB1 <-------TEIL            ------->TEIL          --------->MYB52(1)     <---------ARR11(3)   tattgtctgggcatacataagcttttctagttgtatgtatataaactgggaccaagtgataccggaagaaaccaaaggagaagatgttaaatgtggtgtc  25415700     -------->HAHB4     --------->YAB1    <---------YAB1  <--------ATHB1  <--------HAHB4  -------->HAHB4  <---------ICU4  --------->YAB1  --------->ATHB51 <---------YAB1 --------->ICU4 <---------ATHB51                                                                          --------->CCA1(2) -----ANAC46                                                                              <---------ARR11(3) -----ANAC58                                                                          ---------->DOF2 ------>GT1                                                                    <---------TOE2(3) -NtERF2                                                                      --------->YAB1 --ANAC46                    <---------ICU4        <-----------GT1            --------->MYB52(1)<---- -----ANAC58              --------->YAB1     <---------YAB1           --------->AHL20(2)  --------->ARR11(3)   gtaataattatagtcatttgtagttgaatagtaatgacagtctcatcgtgatttaactactatggacacaaataaaacaataacgatggaaagatatata  25415800                                     ----------->GT1                                    <---------ZAT6                        --------------->AGL15                                  ------->TEIL                        <---------------AGL15                               <---------ANAC55(2)                       ----------------->AGL2      ------>ZmHOX2a(2)        <---------YAB1  <---------MYB52(2)   ----------------->AGL3    <---------ARR14(2)   <---------AHL20(2) -------GT1            <-----------------AGL3    --------->ARR14(2)   --------->AHL20(2)   acaaactaactagagaaatttgttaactaaaaatagtagtggtgaattttagatcggcttaacatgctctaaaaaattatgtatgtctagttttttgttt  25415900  Previous    Next  AGI:  At5g63410.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G14210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68270.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 25412210    to: 25415379    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version