Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <-------GAMYB                          --------->DEAR3(1)                        ------>NtERF2                                                     <---------HSFB2a(2)                        --------->ABI4(1)                                                 --------->HSFB2a(2)                       --------->DREB2C(2)                                               ------>ZmHOX2a(2)                       ------->GAMYB                                                    <------ZmHOX2a(2)             <-----------ARR10                                                         <---------AGP1             --------->ARR11(3)                                                        --------->AGP1             <---------ARR11(3)                                                        <---------ARR11(3)      ----------->GT1  <---------ALFIN1                                                <---------ARR14(2)      <---------ANAC46 --------->DEAR3(1)                                     --------->ANAC58   --------->ANAC46 --------->DEAR3(1)                                        --------->ANAC58   <---------DEAR3(1) --------->MYB46(3)                                     --------->DAG2  --------->SPL7    <---------ALFIN1                                        ---------->DOF2---------- ---------SPL7      --------->AtMYB61               <---------MYB52(1)   --------->LBD16--------->CCA1(2) ---------------SPL14--------->ABI4(1)         <------ZmHOX2a(1)       <---------LBD16 --------->ARR14(2) -----MYB52(1)     --------->MYB46(3)       --------->DAG2           <---------ALFIN1  --------->ARR11(3) >LBD16   --------->AHL20(2)               ---------->DOF2    <---------At4g35610     <---------CCA1(2)   tttgtacggcgttaaaatctcaccaccgccgttgaaactcagccataaaggaccgtttcgcttctgcttctccaccggaaaagcattcagatctggaaaa  25398000                                           --------->ALFIN1                                          --------->LBD16             ------>ZmHOX2a(2)                                         <---------ANAC46            <<<<<<<<<GATA-4                                         --------->DEAR3(1)          <<<<<<<<<GATA-3                                      ------->GAMYB                  <<<<<<<<<GATA-1              <--                                      --------->DEAR3(1)             <------ZmHOX2a(2)            ---                                      --------->ANAC46               <<<<<<<<<GATA-2          -------              <---------ARR14(2)     <------------AtMYB77            <---------GLK1(1)        <------             <------NtERF2           --------->MYB46(3)             --------->ARR11(3)       <-------           <---------ANAC58         <---------At5g28300             <---------AGP1          <--------           <---------ANAC58        <-----------GT1                  <---------ARR11(3)  ------->TEIL  <---------CCA1(2)   ---------->DOF2--------->DEAR3(2)            <---------CCA1(2)  <---------ZAT18 ->GT1 <-----------RAV1(2)         --------->ARR14(2)        <---------ALFIN1    <---------YAB1------   actcgtttctcaggcgtctctggtaaaagagacaatgtaaccgccgtggtagtagcagtgtctccacttagatctctcttcttcttattgcaccttcggg  25398100                                                                --------->HSFC1(2)           --------                                                                --------->ZAT2              <------NtERF2                                                                <---------HSFC1(2)          ---------           <---------KAN4(1)                                    --------->HSFB2a(1)         ---------     <---------LBD16                               --------->TOE2(2)                       <---------At4g35610    --------->MYB52(1)                             --------->TOE1(2)                      --------->TCP20   <---------ALFIN1                               ----------->RAV1(2)   <---------ALFIN1  --------->TCP16(1)  --------->MYB46(3)                            <<<<<<<<<GT-1   <---------ZAT2            <---------ARR14(2) -------GLK1(1)                              --------->ARR14(2) --------->At4g35610       --------->ARR14(2) ------>GLK1(1)                              <---------ARR14(2) <---------HSFB2a(1)      --------->ATERF1(1) -->HSFB2a(2)   <----------DOF2      =============================HOX2a_HOX2a          --------->ALFIN1 ---HSFB2a(2)--------->GLK1(2)       ------>ZmHOX2a(1)     <------ZmHOX2a(2)         <---------ANAC46 --LBD16   --------->KAN4(1)         ==============================HOX2a_HOX2a      <---------AtMYB61 -LBD16--------->LBD16    <----------DOF2  <---------TOE1(2)------>ZmHOX2a(2)       <-----------RAV1(1) --->LBD16<---------KAN4(2)     <----------DOF2 <-----------GT1 <---------At4g35610 --------->ALFIN1   agttcccaccggaacaatctttttgatactttctctttcctctcccagatttacctgagagatcggagcttccaccacttgtagttgtggtggagccgct  25398200                                ----------------->AGL1                              ------>NtERF2                             ----------->HVH21    <-----------HVH21       --------->ATERF1(1)                           ------>ZmHOX2a(2)   --------->LBD16        <---------DEAR3(1)                            --------->ARR14(2)  --------->LBD16       <-----------HVH21                         --------->ATHB12                --- <---------LBD16       --------->DEAR3(1)           --------->ANAC58    <---------ARR14(2)        <-- ->DEAR3(1)         <---------ALFIN1             <----------ID1  <---------YAB1                  ---- >ATERF1(1)    <---------HSFC1(2)        <------ZmHOX2a(1)     --------->YAB1 <----------DOF2    <--- >RAP2.3(1)    --------->HSFC1(2) <---------DEAR3(2)--------->ANAC58  ----------->ARR10      --------   cttcccggtgagagagacacttccaccgtcgctggccggtttaggagcaatgggacgaaaacgaagcatgattcgatctgctttggagagaccgtagcga  25398300             <---------ARR11(3)             <---------ARR14(2)             --------->ARR11(3)             --------->ARR14(2)             <---------ARR11(1)          <---------------AGL15       -------->P          --------->AtMYB61           ------>MYB46(1)          --------------->AGL15      <---------ALFIN1         ----------------->AGL2  ------>MYB83       ------->GAMYB             ------>MYB46(1)      --------->MYB46(3)       ------->GAMYB      <---------MYB55(2)       --------->AtMYB61    <---------ARR14(2)        --------->MYB46(3)    --------->ARR14(2)      ------->GAMYB--------->ORA47(1)  --------->At5g28300      <---------MYB111(2)                  --------->ARR11(3) ------>AtMYB61            <------------MYB.PH3(2)              <---------ARR11(3) -------ALFIN1             --------->MYB46(3)   <---------ARR11(3) ----->MYB46(3)            <---------MYB55(2)   --------->ARR11(3) ------ABI4(2)        --------->AtLEC2------>MYB83------>ZmHOX2a(2)<----------DOF2              <---- ->DEAR3(2) <---------CCA1(2)-------->P--------->DEAR3(2)      <---------CCA1(2)            <--------   ccaccgtaaccaccatatctggctatgcaacaacctcccctaccgtccatgatctctctctgtatatatctttctctcttaataggttttagtgggagct  25398400                                                                           <---------ANAC58                                                                           <---------ANAC58                                                                         <---------ANAC55(2)                                                                    ----------->ARR10                                                                   <--------P                                                                  <-------GAMYB                              ----------->GT1                    <------MYB83                        ----------->HVH21                        <------MYB46(1)         *TSS       <---------ANAC46                             <---------ANAC46          --------->ARR14(2)      --------->YAB1<---------ANAC58                            <---------MYB46(3)     <---------HSFB2a(2)     --------->ICU4 <---------ANAC58                           <---------ANAC46        --------->HSFB2a(2)   --------->YAB1 --------->ALFIN1                          --------->ALFIN1 <---------CCA1(2) ------DOF2       <---------ANAC46<-----------TBP           <-----------RAV1(1)  <----------DOF2 -PCF2<---------ICU4--------->ALFIN1               <---------At4g35610 --------->CCA1(2)   <---------ARR14(2)   ttgaagaataatgaagagaggtgtgtgtgaaggggtttatatagggactctgaagatgacaagtgttgggttgatacgcgtgtctttgtctagaatacgc  25398500                  ------->MYC3                  <-------MYC3                  <-------MYC2                  <-------PIF5                  ------->MYC2                  ------->PIF5                  <-------MYC4             XXXXXXXXXXXXXXXXXXXX>MIR835-5P            ------->PIF5            <-------PIF5        <---------ZAT18     ---------->ID1     <-------GAMYB------->PIF4               --------->AtLEC2    <---------YAB1        <----------ID1  <---------At5g28300   <----------DOF2      ----------->GT1    <---------TOE2(3) <---------HSFB2a(2) <-----------GT1  <-------PIF4    --------->HSFB2a(2)  ------->TEIL               --------->HSFB2a(2)   ttatcaccgttgcacttgcacatgctctttttccttctgtaatggacatgaaaaatgaatcgaatttatgtttaaaactattttctaaaacgacaaaaaa  25398600                                                                                       <---------TOE2(3)                            --------->AHL20(2)                                       <---------AHL20(2)                            <---------AHL20(2)                                      <---------AHL20(2)                            <---------YAB1                                          <---------AHL20(1)                           --------->AHL20(2)                                       --------->AHL20(2)                           --------->AHL20(1)                                 ----------->GT1               ----------->HVH21     --------------->AtSPL8                   --------->YAB1             <---------ANAC58   --------->AHL20(2)                        --------->ICU4             <---------ANAC58   <---------AHL20(2)              ---------->DOF2     --------->AHL20(1)        <---------ICU4     <---------AHL20(1)            --------->YAB1   <---------YAB1   ----------------->AGL3 --------->YAB1       <---------AHL20(2)   --------------->AtSPL3   aactattcaaaaatggcatgacatagaaatataattaaacttgtactattttttttttatcacaaattaagcagtacttattgtaatttaatgttttaaa  25398700              --------->ATHB12             <---------YAB1    <---------DEAR3(2)    <------MYB46(1)                                                 ----------->GT1    <------MYB83               --------->ARR11(3)                  <---------TOE2(3)   <---------MYB46(3)          <---------ARR11(3)          ----------->HVH21  <---------AHL20(2)    -   <---------DEAR4(1) <---------HSFC1(2)              <---------TOE2(3)   <---------AHL20(2)   <-----   <---------DEAR3(1) --------->HSFB2a(1)           <---------AHL20(2)   <---------ARR11(3)   <------   <---------DREB2C(2)--------->HSFC1(2)            --------->AHL20(2)   <---------AHL20(1)  <-------  <---------ORA47(1)  <---------HSFB2a(1)          --------->AHL20(2)    --------->ARR11(3)  <-------GAMYB   aatggtcggtgttttgttattggaaaattcgaagttctcagtatattggtctaattaatatttgacatgaaggtatatatttgattcttatattcggttg  25398800                                                  <---------ICU4                                                  --------->YAB1                                                 <---------YAB1         <---------LBD16                         <---------AHL20(2)    ---------->DOF2                            --------->YAB1           --------->ANAC58   --------->YAB1                             <---------YAB1            --------->ANAC58  <---------ATHB12                           --------->AHL20(2)       --------->MYB52(1)--------->GLK1(2) -------->WOX13(1)                         <---------RVE1(1)         <------ZmHOX2a(1) ------>MYB83 ----MYB46(3)                             --------->ARR11(3)       --------->ANAC58    ------>MYB46(1) ---MYB52(1)                <---------YAB1<---------GLK1(2)        --------->ANAC58  <---------MYB59 --MYB52(1)        --------->AHL20(2)     <---------ARR11(3)       --------->ANAC46--------->GLK1(2)   ttcaatcaaagcgcggatgaaaaaaatatgatgttagcattcgagatttttataattagacgtatacataaggaacggaattgagaacctaatctggtct  25398900  Previous    Next  AGI:  At5g63350.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G48510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68256.1) Range:  from: 25397226    to: 25398409    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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