Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ----------->HVH21            <----------DOF2      ------>ZmHOX2a(2)            <---------DAG2     --------->ARR14(2)                                  <---------ICU4       <---------ANAC58        <---------ARR14(2)                                 --------->ICU4       <---------ANAC58        <---------AGP1               ---------->DOF2     --------->YAB1   <-----------RAV1(2)<---------REM1(2)              --------->TOE2(3)       <----------DOF2 --------   caagttcaggcgagctttttcgtcaacacagtagatcggacacttaaaaattcaaccttggtaaaagccttctctcgagctttcataatggtatcagcaa  25393400                                        --------->GLK1(2)                                        --------->ARR14(2)                        <---------DOF5.7(2)                       <---------ARR14(2)                       ----------->HVH21<---------ARR14(2)                       --------->ARR14(2)                      --------->At5g28300   --------->LBD16                      --------->DOF5.7(2)   <---------LBD16                 <---------LBD16       <---------GLK1(1)        --------->ALFIN1                 ------>NtERF2         --------->GLK1(1)      --------->At4g35610           ---------->DOF2       <---------LBD16              <---------ZAT2         --------->ANAC58      <---------ARR14(2)             --------->ZAT2 ------>ZmHOX2a(1)-------         --------->ANAC58     <---------CCA1(2) ----------->ARR10   <---------At4g35610 ---------->DOF2 <---------GLK1(2) --------->LBD16 <---------LBD16          <-----------RAV1(2)   --------->YAB1   -- ->At4g35610    --------->DEAR3(1) --------->LBD16   <-----------GT1--------->At4g35610--------->AtMYB61   aacgattcttcaagaaagccgcgcggtaacgcttatctggggaatctggggaaatttgcctctcaggtggagcagtctcctctataataccaaagcatga  25393500                                                 ------>ZmHOX2a(1)                                                --------->TOE1(3)                                                --------->TOE2(3)                                              ------>MYB46(1)                                           --------->HSFB2a(1)                                           <---------HSFB2a(1)             ------>ZmHOX2a(2)             --------->HSFC1(2)          --------->HSFB2a(2)            --------->At4g35610            <---------HSFC1(2)          <---------HSFB2a(2)          <           <---------ARR11(3)             ------>MYB83          <-----------GT1                    <-       --------->YAB1                     -------->P  <----------DOF2----------->RAV1(2)          --- ---->HVH21--------->ARR11(3)  <-----------GT1------>MYB83    <---------ANAC58                    <-- --------->GT1      --------->AHL20(2)    ------>MYB46(1)     <---------ANAC58                   <---   caggtaaactcatgatctgaaaataaacatctattaccatctccaaccttccttaactttcatttcttaccatctggaacgagaactactgcatccatgg  25393600             --------->MYB52(1)           --------->LBD16          --------->ANAC46                                                   <------NtERF2         --     <----------DOF2                                                        <---------HSFB2a(2)    --     <---------DAG2                                                         --------->HSFB2a(2)  <--- --------->WRKY12                                                          <---------ANAC46     ----- ---------WOX13(1)                                                         --------->ETT(1)     <---- ------GAMYB ----------->RAV1(1)                 --------->GLK1(2)         <---------LBD16      <---- ------>MYB55(2)                 ------>ZmHOX2a(2)                      --------->ALFIN1  <---------ARR14(2) -------MYB46(3)   <---------ZAT18              <---------GLK1(2)     <---------ANAC58    --------->ARR14(2) ------AtMYB61     --------->ZAT14       --------->AtLEC2             <---------ANAC58   <---------CCA1(2)   tggttgacttttccccaacagtatgctcaagttgatccaattcattcaaagaatctacagagaacaaagaatgagtgtcgggaagacttctatatccgag  25393700                                                                                                    <                                 -------->P                                                        <-                       ---------->DOF2                                                             <- ------->ANAC58     --------->AHL20(2)                                                          <---- ------->ANAC58     --------->YAB1                                                           ------>ZmHOX2a(1) ------ALFIN1      <---------ATHB51           <---------ARR11(3)        <----------DOF2    ---------- ---->ZAT14      --------->WOX13(1)           --------->ARR11(3)      ------>ZmHOX2a(1) ------>MYB46(1) -----ZAT18   --------->TOE2(3) <-----------GT1                  --------->YAB1         ------>MYB83< -----ZAT14 <-------TEIL      <---------MYB52(2)        <-----------RAV1(1)             -------->P <-   cactccaacttgcatacatcaattataaagagactaaccatttacaactatcttctcactgttgctatcatcctcttttttgtctataccaactcctggt  25393800              --------->AHL20(2)                              <---------WOX13(1)         ------>ZmHOX2a(1)                                   <------------CBF ---------DAG2<---------AHL20(2)                            <---------ICU4 --------ANAC58                                             --------->ATHB12 --------ANAC46                                          --------->YAB1 ----P  --------->TOE2(3)                             <---------DAG2 ->RAV1(2)   *TSS          <---------ZAT14            <----------DOF2 ----------DOF2      <------ZmHOX2a(1)             <-----------GT1                 <------------CBF --------ANAC58---------->DOF2             ----------->GT1 <---------YAB1   --------->AtLEC2   tgctttttttcctaaattaaagaggagactatacttatttttctgtagtaatttcacttttatgattgcaaatagtccatggaaatattggtgagtaaat  25393900                                                                       <-----------GT1                                                                     --------->CCA1(2)                                                                    --------->ARR11(3)        <---------HSFB2a(2)                                         <---------ARR11(3)        --------->HSFB2a(2)                                     <---------MYB52(1)  --------->GLK1(2)                                            <-----------HVH21  <---------ARR11(3)                                          <---------ZAT6                      <--  --------->ARR11(3) ----------->RAV1(1)                 >>>>>>>>>>>>>>>>>LFY        <---------ANAC46   gaaaaatcttgcagaaattagagcaacatccaaacacagagactccataacataagttattccactgttagatatacctctctacttgtgggttttgaag  25394000                                                    <---------ARR11(3)                                           --------->GLK1(2)                                       --------->YAB1                      --------->LBD16--------->GLK1(2)                     --------->HSFB2a(2)   --------->ARR14(2)       <---------ARR14(2)           --------->YAB1  --------->ARR11(3)       --------->GLK1(2)   <---------ARR14(2)      --------->YAB1       --------->ARR14(2)  --------->ARR14(2)   ---------->DOF2               --------->DAG2      ---      <---------GLK1(2)   <------ZmHOX2a(1)<---------ARR14(2)     --------->ANAC46      ------>ZmHOX2a(1) --------DOF2        <---------HSFB2a(2)  <---------GLK1(2)--------->ANAC46  ---------->DOF2---------   ctttaatagaatctgtttcactcccagaggaactacaagaatcagaatctgaaagataatcacagaacacatcagtataaaaagcacttcctatgagtaa  25394100                                                                                                  ---                                                                                              -------                                                                                              <------                                                                                           --------->YAB1                                                                                          <---------YAB1      ---------->DOF2                                                                --------->MYB52(1)  --------->DAG2                                                                   <---------MYB52(2) ---------->DOF2                              <---------ARR11(3)           ------->GAMYB--------->YAB1 ------>YAB1                                  --------->ARR11(3)           ----------->RAV1(1)<------ -->GT1                            --------->TOE2(3)       --------->YAB1 --------->MYB46(3)  -------   aaataaagcaaaggaatcaattctacagtttgccaaaccacaatgtaagaacttaattcattcgtcataaacgataaccacagaaactaactataatatc  25394200                                                                     <---------SPL7                                                                    <---------ANAC46                                                                 --------->ANAC58                                ----------->GT1     <---------ARR11(3) --->ZmHOX2a(1)    <---------ALFIN1    --------->DAG2            --------->ANAC46 -->ARR14(2)     ------->GAMYB<---------ZAT14       --------->ARR11(3) ---ARR14(2)    --------->MYB46(3)    ---------->DOF2       ----------->HVH21 ---ARR11(3)  <-----------GT1 <---------At4g35610 ----------->GT1--------->ANAC58<-----------GT1  <-- -->ARR11(3)<---------KAN4(2) --------->ZAT14   ---------->DOF2  ----------->HVH21             <-----   ctctatagcaagggaataaccacacttactagagcagagaaaaagcatcgaaaagataatatgggacacgacgtaggctcaaattacaaaacaagactca  25394300  Previous    Next  AGI:  At5g63320.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to hypothetical protein PFE0440w [Plasmodium falciparum 3D7] (GB:XP_001351647.1); contains domain FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS (PTHR22880); contains domain GCN5 GENERAL CONTROL OF AMINO-ACID SYNTHESIS 5-LIKE 2, GCNL2 (PTHR22880:SF2) Range:  from: 25391639    to: 25393813    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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