Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->AHL20(1)                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(1)                                                                                       <---------AHL20(2)                                                                                      --------->YAB1                                                                                  <---------AHL20(1)                                                                                  --------->AHL20(1)                                                                                  <---------AHL20(2)                                                                             <---------AHL20(2)                                                                             <---------YAB1                                                                            <---------AHL20(2)                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                                                       --------->AHL20(1)                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                              <---------ICU4           <---------AHL20(1)                                              --------->YAB1     --------->ANAC58 --------->AHL20(2)  --------->YAB1            --------->At4g35610             <---------YAB1<---------YAB1<---------YAB1 ---------At5g28300       <---------WRKY18(1)<---------ATHB12    --------->ANAC46--------->AHL20(2) ----------GT1           ----------->HVH21 --------->WOX13(1)    --------->ANAC58<---------AHL20(2)   tttaccataagtttgtattgtagtcccatgacctgaaatcgaagacaatcatcgcacaaattttcataggcaatttatttttattaaattataatttagt  25374600                                                                 --------->YAB1                                                                 --------->TOE2(3)                                                                <<<<<<<<<ARR2             ===========                                                     --------->YAB1                       <----------DOF2                            --------->AHL20(2)      <---------ATHB12           ---------->DOF2                            <---------AHL20(2)    --------->WOX13(1)        --------->RAP2.6(2) <----     <-----------GT1--------->ZAT6         --------->CCA1(2)    <<<<<<<<<ARR1  ======================   ttgggtattactgtatacaataacacaaaataaaatccatattagatataaacaatcaatagcacaatcttaatacagtcgcaaagagttttctttattt  25374700                                                                                --------->ANAC58                                                                   --------->ANAC58                                                                   --------->ANAC46                                                                   --------->ANAC58           ============================================MYC_MYB     --------->ANAC55(2)           ===================bZIP_DOF                          ------>MYB46(1) --------->ANAC58           --------->O2                                         <---------REM1(2)           --------->TGA1a                             <-------GAMYB          <---------ALFIN1           <---------TGA1a                           <---------TOE2(3)------->TEIL           <---------O2<---------ANAC58         --------->AtMYB61  --------->ANAC55(1) --------->ZAT14       <---------ANAC58     --------->MYB46(3)  ------>MYB83 <---------REM1(2)  ----- ====================bZIP_DOF <---------ETT(2) --------->MYB46(3)<---------ALFIN1              <----- -----AHL20(2)     <----------DOF2   ----------->RAV1(1)        -------->P ----------->HVH21 -------- ====================bZIP_DOF --------->ETT(2)-------->P    ------->TEIL   --------->ANAC46 <--------   aagtatagtagacacatgagtctttacttgggtcgacaacaacaaaacaaccactacggttgaacctacacgcatcttcgacacggccatggctatgata  25374800                                                                     ------>ZmHOX2a(2)          -----                                                                   --------->ARR14(2)           -----                                                                   <---------ARR14(2)  <-------GAMYB                                                                 <------MYB46(1)     <------NtERF2                                                                 <------MYB83       ------>NtERF2 ---                                            ----------->GT1  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -----     <-------TEIL                         <-------GAMYB     --------->LBD16        --------->DEAR3(1) ---->YAB1             ----------->GT1  <---------TOE1(3) <---------LBD16          --------->ANAC46 ----YAB1          <-------TEIL --------->DAG2          <---------ALFIN1 <---------ZAT14  --------->At4g35610 ->YAB1     --------->TOE1(2)  ---------->DOF2 <-----------GT1 <--------P--------->ZAT14<---------MYB52(1) -YAB1--------->YAB1<---------AtLEC2    <---------TOE2(3)--------->MYB52(1)        <---------DEAR3(1)   ataagcgttcatgacatacgatgcatggtcaaataaagtattagggttgtaacaattcccaccgggttggatcggtgtacaatcgacgccgttgctgcaa  25374900                                                  --------->SPL7         <---------ANAC46                           --------->At4g35610  <---------ZAT18       --------->O2                           <---------At4g35610 <---------ANAC46       <---------TGA1a                    <------------AtMYB77       <---------ANAC58       =========================MYC_MYB       ================================RAV     <---------ANAC58  --------->ANAC58       <-----------RAV1(1) ----------->RAV1(2)--------------->AtSPL8  ----------->HVH21 ---->ANAC58      <-----------GT1             --------------->AtSPL3  --------->TGA1a ---->ANAC46 <---------ANAC46                 <---------------AtSPL8  <---------O2          --------- ------>YAB1 <---------ANAC58         --------->MYB59            --------->ANAC46      <---------At4g35610 ---->ANAC58 <---------ANAC58  <---------TOE2(3)<---------SPL7   --------->ANAC58      <-------GAMYB   gcaaaatcaatgttggcttgtaactgctcatctgaggtattaggcattggcgtacaccattgtctgcaagtcacgacggggatagagacagttgatatga  25375000                                                *TSS                                        ---------                          ------>NtERF2         ------------>CBF                            <--------       ----------->GT1 ------->GAMYB         <------ZmHOX2a(1)                              <--------       <---------ZAT6 --------->DEAR3(1)   <---------TOE1(3)                              <---------- >>>>>>>>>TBF1        --------->MYB46(3)<---------REM1(1)                          <-------TEIL <---- >CCA1(2)   ---------->DOF2          --------->ALFIN1                 <----------DOF2    ------->TEIL   gaagaagaagtgttaaaagttgcaacgacgacattggaagtggtgaaggattcaatagttttgatgtgttatctttttgtgcaagtacatgtatatatat  25375100                                                                             --------->ARR11(3)                                                                             --------->AHL20(1)                                                                             <---------ARR11(3)                                                                             <---------AHL20(1)                                                                          --------->YAB1                                      --------->YAB1                     <---------YAB1                                     --------->AHL20(2)               --------->ICU4                <                                 --------->AHL20(2)                --------->AHL20(1)             <--                                 <---------AHL20(2)                --------->AHL20(2)             <-- --------->STY1(2)            <---------AHL20(2)                   <---------AHL20(2)            ---- <---------STY1(2)            --------->AHL20(2)                  <---------AHL20(2)        <-------- >AHL20(2)                   --------->AHL20(2)                --------->AHL20(2)           <-------- -AHL20(2)                   --------->ICU4          --------->ARR11(3)<---------ICU4      --------->YAB1 ---TBP                 ----------->GT1          ---------->DOF2  --------->AHL20(2)      <---------YAB1 -TBP                 <------ZmHOX2a(1)--------->AHL20(2)     --------->AHL20(2)        --------->YAB1 -------GT1------------>MYB.PH3(2)--------->AHL20(2) <---------ARR11(3)--------->YAB1  <---------YAB1   actagctagggagagatagttagaggaagtaataaataaataaaaatactctaaaggtattccattaaaaaaattatgatatatttcttcttataatatt  25375200                                                            <---------CCA1(1)                                                            <---------GLK1(1)                                                <---------ICU4                                               <---------ATHB51 <----------DOF2                                               <---------AHL20(2)                               <----    <---------RVE1(1)           <---------GLK1(1)           --------->GLK1(1)                   -----   <---------GLK1(2)<--------HAHB4             --------->AHL20(2)                              ------   <---------ARR11(3)           --------->GLK1(1)           --------->RVE1(1)               ---------   --------->ARR11(3)  --------->AHL20(2)    --------->YAB1 --------->CCA1(1)               --------- --------P          <---------ICU4         --------->AHL20(2)--------->ARR11(3)             <-------- ----MYB83          --------->ATHB51 -------->P--------->ICU4<---------ARR11(3)            --------->AHL20(2) ----MYB46(1)      --------->ICU4--------->ARR11(3)         <---------RVE1(1)              <---------AHL20(2) ----->MYB59       <---------YAB1<---------ARR11(3)        --------->ARR11(3)      --------->AHL20(2) -AHL20(2)       --------->YAB1<---------ARR11(3)          <---------ARR11(3)      <---------AHL20(2) -AHL20(1)      <---------YAB1 --------->ARR11(3)  --------->AHL20(2)            <---------AHL20(2)   tggtagattttttgatatatcataattaacttagatatctaccaaaaaaataattaacttagatatctttcatttatggctatatttttttaaaaaaatt  25375300                                            --------->AHL20(2)                                            <---------AHL20(2)                                           <---------------AGL15        <---------ICU4                  --------->AHL20(2)        <-----------GT1                 <---------AHL20(2) ----------->GT1                    <---------YAB1----------->GT1 -----AHL20(2)                   --------->AHL20(2) ---->AHL20(2)                   --------->ICU4  --------->DAG2       --------------->AGL15 --->AHL20(2)                 --------->AHL20(2)---------->DOF2       <----------DOF2     --------->ATHB12 >AHL20(1)           ------->GAMYB<---------AHL20(2)     ----------->GT1              --------->ATHB12 >AHL20(2)          <---------MYB52(2) <---------YAB1---------->DOF2  <---------------AGL15 -AHL20(2)          <------------MYB.PH3(2)===========================================MADS_MADS   aatgagttaataactatatacaactaactcaaatatttattattaattaaaaaagtaaagagttattagctacttttaaaagttttagttattgatttga  25375400                <---------AHL20(2)       <---------AHL20(2)                <---------ICU4          <---------AHL20(1)               --------->ICU4           <---------AHL20(2)         ------->TEIL          ----------->GT1               --------->AHL20(2)      <---------YAB1 ----------->GT1    --------->AHL20(2)               --------->YAB1  ---------->DOF2       <---------ANAC55(2)  -----   acaagattaaaaatgtaataaatgcttatatgaaacctataatttttttggagaaaaaagacacctatgaatgtattaagtgagtaacatttagtgaatg  25375500  Previous    Next  AGI:  At5g63230.1    Description:  glycosyl hydrolase family protein 17. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63225.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83700.1); contains InterPro domain X8 (InterPro:IPR012946) Range:  from: 25374586    to: 25375048    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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