Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------ANAC58                          <---------ANAC58             ----------->HVH21                                               <---------AHL20(2)            <-----------HVH21                                                --------->AHL20(2)            <-------MYC3  <---------AtLEC2                                   <---------AHL20(1)           <---------At4g35610                                           <---------YAB1           --------->At4g35610                                       <------------------------ANAC81   ---------->DOF2 <---------MYB52(1)                               <---------ZAT6  ---------->ID1 --------ID1------->MYC3  <---------ANAC46                      <---------YAB1<---------AHL20(2)   <-   gagacaaaagggcatgtgaccggtttttgcttgaaaactacttgctaacttcttctctactcatttatcagtgttataatttttttgttttttttataca  25362400                                                        <---------AHL20(2)                                                        <---------ICU4                                                        --------->ATHB51                 <-----------GT1                        --------->AHL20(2)                 --------->YAB1                         <--------ATHB1              --------->YAB1                           <---------YAB1                 <---------ARR11(1)            --------->AHL20(2)                         --------->ICU4                 <---------ARR14(2)       --------->ZAT18                               --------->YAB1                   <---------ARR11(3)       <-------TEIL             <---------YAB1      <---------YAB1                    --------->ARR14(2)      --------->DOF5.7(2)       ------->TEIL        --------->ICU4                   <---------CCA1(2)   <---------TOE1(2)    <---------AHL20(2)        --------->YAB1                <---------ARR11(3) --------------AtSPL3  --------->AHL20(2)<---------AHL20(2)           --------->AHL20(2)   catagtacgttcactaaaataacaatttaaaatgaatattgatataatttagtcataataatttgaaaaatataaaatacaatatccatatctgttttaa  25362500                                                                      --------->ATHB12                   --------->ARR11(3)                                <---------ATHB12                   <---------ARR11(3)                                --------->MYB46(3)          --------->RAP2.6(3) <---------YAB1                       --------->WOX13(1)         --------->ATHB12 <---------AHL20(2)                     --------->WRKY18(1)        <---------YAB1    --------->YAB1                   <---------TOE2(3)                   <-----      <---------ICU4      --------->AHL20(2)               <---------TOE1(3)                   ------      --------->YAB1 ------>ZmHOX2a(2)             <----------DOF2<---------WRKY38(1)         -------   --------->YAB1--------->ICU4            --------->YAB1 <-----------GT1   --------->ARR11(3)-------   aactataaacatgatggccatgatctaataatatgattccatgaagcataaaacttttattaacgtagtcaaccattggatattgtccagcccaaaatat  25362600                    --------->MYB46(3)                   --------->ANAC58                   --------->ANAC58                   --------->ANAC46                  ------>MYB46(1)                  ------>MYB83                  -------->P                --------->AtMYB61                <---------MYB46(2)                <---------MYB59                <---------MYB111(1)               <---------HSFB2a(1)               <---------HSFC1(2)               --------->HSFB2a(1)                        <---------AHL20(2)               --------->DEAR3(2)                         --------->AHL20(2)               --------->HSFC1(2)                         --------->AHL20(1)          --------------->AtSPL3                         --------->AHL20(2)        <----------ID1                                   <---------AHL20(2)              <---------KAN4(2) ----ARR11(3) <-----------ARR10                 --------->ARR11(3)             ---------->DOF2 --->ARR11(3) ------->TEIL                      <---------ARR11(3)        <---------AHL20(2) -->RVE1(1)  <---------ARR14(2)              <---------AHL20(2)           --------->AHL20(2) -->CCA1(1) <------NtERF2---------->DOF2     --------->AHL20(2)    ----------->GT1   ----------->GT1   ctaattcaatgggccgaacctacccaatacagcccattgttttggattaaaatctttaaaaaaattggaggctaaattaaaaaaagaaggaaatattcta  25362700                        --------->ALFIN1                      --------->O2                      <---------ANAC55(1)                      <---------ANAC58                      <---------bZIP60(2)                      <---------ANAC58                                                        <------ZmHOX2a(2)                      <---------TGA1a                                                         =======                      <---------O2                                                   --------->ATHB12                     ----------->STF1                           <------------CBF    <---------YAB1                     ----------->bZIP911(2)                   --------->AHL20(1)  <----------DOF2----                   ----------->TGA1                           <---------AHL20(2)  <---------------AGL15                   ----------->HVH21                         --------->YAB1 <---------------AtSPL8             <---------ANAC46                                --------->AHL20(2)   --------------->AGL15      --------->ANAC58=============================================bZIP_DOF --------------->AtSPL8      --------->ANAC58<---------ANAC55(2)         --------->ANAC46  *TSS --------->DAG2      <-------      --------->ANAC55(2)           ----------->TBP         <---------YAB1  <---------------AtSPL3      --------->ANAC46<---------ANAC46         --------->ZAT18<---------AHL20(1) <-----------------AGL3    <---------ALFIN1<---------TGA2(2) <---------AHL20(2)<----------DOF2 ---------->DOF2      --------   agccctccacgtattacgttgatgacgtgtaccatcgtatataaacaaatgcacaaaactttattatattgttgtaaagtagtacttttattggcgatcc  25362800         ------>ZmHOX2a(1)                                                     <---------MYB52(1)     <---------ARR14(2)                     ------->TEIL                      <-------GAMYB     --------->ARR14(2)                    <---------CCA1(2)                 ------>ZmHOX2a(2) ===============HOX2a_HOX2a  <---------ARR14(2)                      --------->AHL20(2) -->ZmHOX2a(1)               --------->GLK1(2)<---------ICU4         <---------AHL20(2)     <-------- --ARR14(2)        <---------MYB52(1) <----------DOF2            <---------ZAT6--------->DOF5.7(2)<-- ->ARR14(2)       <-------GAMYB   ----------->HVH21              ----------->GT1       <----------DOF2   tcatccatttcctctctcgtcgttgtctgggaatcggtgacttttgaatctttgcgactctcttgtagtgataaattgatcgttatctactttgatactc  25362900                                   <---------CCA1(2)                          ===============HOX2a_HOX2a                          ------>ZmHOX2a(2)                         ================HOX2a_HOX2a                         <------ZmHOX2a(2)                         --------->CCA1(2)                         --------->ARR14(1)                            ----------->GT1                        <---------ARR14(2)                          --------->ANAC58                        <---------ARR11(3)                  ------>ZmHOX2a(2)                        --------->ARR11(3)                 --------->CCA1(2)                        --------->ARR14(2)                 <------ZmHOX2a(2)                       <---------GLK1(1)       <---------ANAC58     --------->ANAC58                 --------->ZAT2   ================================HOX2a_HOX2a                 <---------ZAT2   =================================HOX2a_HOX2a                --------->ALFIN1  ------>ZmHOX2a(1)       <---------ARR14(2)               <---------MYB52(1)<---------ANAC58         --------->AGP1   <---------MYB46(3)  --------->GLK1(1)       <---------ANAC58--------->ANAC46              <------- <---------MYB52(1)   ----------->ARR10<----------DOF2    <---------ARR11(3)                 <------- ---GT1     <---------LBD16      --------->TOE2(3)        --------->ARR14(2)          <----------DOF2 -------LBD16 --------->LBD16    <---------ANAC58        <---------GLK1(1)---------->DOF2    <-------   tccggtcgtttttctccggtgctggagatccgattccttatcttttctgtcttggctcgagatccgagccaagcagtaaagaagacgactttgtttcacg  25363000                            ----------->HVH21                       <---------TOE2(2)                       <---------TOE1(2)                   ----------->HVH21                   <------ZmHOX2a(2)              ------>ZmHOX2a(1)        --------->ARR11(3) ----GT1     --------->TOE1(2)         <---------GLK1(2) ----------AG--------->TOE2(2)   ----------->GT1<---------ANAC46 ----------AGL1   <-----------HVH21  ----------->ARR10                <----------DOF2   --------->ANAC55(2)   atttggaatttgattcctgcgatcacaggtatgacaggttagattttgttttgtatagttgtatacatacttctttgtgatgttttgtttacttaatcga  25363100                <---------ARR11(3)                --------->ARR11(3)              <---------TOE1(3)              <---------TOE2(3)          <----------DOF2     <---------ANAC58                       <---------YAB1     <---------ANAC58                     --------->RVE1(1)     <---------YAB1     <---------ANAC46             <---------LBD16 <---------ANAC46    <---------At5g28300     <------   atttttggagtgttttaaggtctctcgtttagaaatcgtggaaaatatcactgtgtgtgtgttcttatgattcacagtgtttatgggtttcatgttcttt  25363200                          <---------MYB52(1)                                                        <                         <-------GAMYB                                                              <                        <---------ANAC58                              --------->ALFIN1              -                        <---------ANAC58                    <---------YAB1                          <                    <---------HSFB2a(1)                     <---------MYB52(1)                      <                    <---------HSFC1(2)                     <-------GAMYB        --------->DAG2     --                --------->ANAC58                          ================HOX2a_HOX2a              <-    --------->ATHB12--------->HSFC1(2)                    ------>ZmHOX2a(2)    ---------->DOF2    <--   <---------YAB1   --------->HSFB2a(1)     <---------TOE1(2)      <------ZmHOX2a(1)             <--- ----DOF2       --------->ANAC58--------->CCA1(2)         ----------->GT1<---------LBD16        <----   gttttatcattgaatgggaagaaatttcgttgggatacaaatttctcatgttcttactgatcgttattaggagtttggggaaaaaggaagagtttttttg  25363300  Previous    Next  AGI:  At5g63190.1    Description:  MA3 domain-containing protein. similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24800.2); similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24800.1); similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48390.1); similar to H0525D09.11 [Oryza sativa (indica cultivar-group)] (GB:CAH66971.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64189.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76898.1); contains InterPro domain Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891) Range:  from: 25362768    to: 25366022    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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