Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->ATHB12     --------->ANAC58            <---------ARR14(2)                ----------->RAV1(1)            --------->ANAC58            --------->ARR14(2)      ---------->ID1 <---------ATHB12       --------->LBD16           <---------MYB52(1)      <-----------HVH21--------->YAB1       --------->ANAC58        <------------MYB.PH3(1) <---------ANAC58 --------->WOX13(1)      --------->ANAC58      --------->MYB52(1)        <---------ANAC58 --------->YAB1         <---------LBD16            <-   --------->At4g35610        <---------ATHB12------>NtERF2        --------->ZAT6                  <-   <---------At4g35610       --------->ARR14(2) --------->MYB46(3) <---------ALFIN1        --------->ZAT2   cagtctgctaaccgttttcggtttttctcccaatccttgtcgcatcgccaacaatcatcgattggattaccactcccgcacgagaagaaccctagcttcc  25359900                                                                                    <---------ANAC58                                                                          --------->ANAC58                                                                          --------->ANAC46                                                                          <---------ANAC55(2)                                                                          --------->ANAC55(2)                                                                          --------->ANAC55(1)                                                                          --------->ANAC58                                                                         --------->SPL7                                               --------->AHL20(1)        <---------TOE2(2)                                               --------->ARR11(3)        ------->TEIL                                               <---------AHL20(2)     <---------ANAC58                                               <---------AHL20(1)     <---------ANAC58                                               --------->AHL20(2)     <---------ANAC46    --------->YAB1                                               <---------ARR11(3)    --------------->AtSPL3                                        ------->GAMYB            --------->YAB1     <---------ANAC58                                       --------->MYB46(3)        <---------ICU4    <---------------AtSPL8                                      ------>MYB83           <---------AHL20(2)    --------------->AtSPL8                                      ------>MYB46(1)        --------->AHL20(2)    --------------->AtSPL3                                     --------->MYB52(1)  --------->ICU4<---------SPL7<---------SPL7                                     ----------->RAV1(1) --------->AHL20(2)    --------->ICU4 ----------------AGL2               ------->GAMYB      --------->TOE2(3) <-------TEIL<---------ZAT18 ----------------AGL1              --------->MYB46(3)<---------YAB1  <---------------AtSPL3   ttcttgatatggactcgtttatttttctaatgcattaaccaacagacaatatattagcattaattaatcttgacgtacgtaattaggcgtactcataagt  25360000                                                                                              <------                                                                                  --------->ARR11(3)>                                                                            --------->ANAC58 ------>MYB83                                                                            --------->ANAC58 ------>MYB46(1)                  ----------->GT1           <------ZmHOX2a(2)       --------->ARR11(3)     <---------MYB46(2)                  --------->YAB1           --------->ARR11(3)       <---------ARR11(3)     <---------MYB59     <---------YAB1                        <---------ARR11(3)   ---------->DOF2   <---------ARR11(3)<   catagctattaatgcagcaatagtaacaagtgagtttgtgatcaagatcaaaattagccttggatagaaagaacttggaagcaatatctaataccaaaca  25360100         <---------ANAC58                                                            --------->ARR14(2)         <---------ANAC46                                      ------>ZmHOX2a(1)     <---------ARR14(2)         <---------ANAC58                                ------->TEIL             --------->ETT(1) ---ATHB12    ------->TEIL  <-----------GT1            <---------ZAT14      <-----------RAV1(2) >>>>>>>>>WRKY63         <----------DOF2               <---------ZAT18      ---------->CDC5 -----------GT1----------->GT1                         --------->ZAT14   --------->ZAT2      --------   tttgactatttgagtgtatgtaaaatgcttttacatttttgttagaacatatacctgtgtacttcctcgacaacaagctcagggtcggaaacgggcaaag  25360200                                                                                           <---------MYB46(3)                         <---------At4g35610                                            <-----------RAV1(1)                         --------->At4g35610                                        <----------DOF2                        ----------->RAV1(1)                                         <---------DAG2                   ---------->DOF2                   --------->CCA1(2)             <---------ANAC58        --------->At4g35610                         --------->ARR11(1)             <---------ANAC58        <---------------------WRI1                ----------->ARR10               ---------->ID1  --- -->DOF2<---------At4g35610    ---------->DOF2 <------ZmHOX2a(1)              <----------DOF2     <--   acgaagcgagagcggagaacaaaatgcagcagaaaaagataagtgcgaaggatagatatgaagaatttagcattgtgtttctttggctttttgttgttga  25360300              ---------->DOF2             --------->ZAT14             <---------AHL20(2)      <---------YAB1          ---------->DOF2        <---------ARR11(3)        --------->TOE2(2)       --------->ANAC58      <---------TOE2(3)           --------->TOE1(2)     ---------->DOF2      <---------TOE1(3)     --------->ANAC58        <----------ID1                                  < ------>AHL20(2)            --------->ANAC58 *TSS ---------->DOF2                            <------- -------AHL20(2)         <----------ID1   <---------ZAT14 --------->ANAC58              --------->ZAT6   taaatttgaaggtattaaaagagaattgggacgaaacatatgagtgaagagagaaagacaaagcaaagcgatagactatatagcatatgaacacttcggg  25360400                                   ------>MYB83                                   ------>MYB46(1)                                  <---------ALFIN1                                 <---------MYB59           --------->ANAC58      --------->MYB46(3)           --------->ANAC46    --------->PCF2                                  --------->ALFIN1       <---------ANAC58        <---------TCP15(1)                            <---------ANAC46       <---------ANAC58   <------------CBF                                   <---------ANAC58       <---------ANAC46  --------->ATHB12              ------>ZmHOX2a(1)     <---------ANAC58      <---------LBD16    --------->MYB52(2)         ---------->ID1     <---------YAB1   <------------CBF    <---------MYB52(1)      --------->TOE2(3)      --------->AHL20(1)            -  --------->ATHB12     --------->DOF5.7(2)  <-----------GT1           <---------AHL20(2)            - <---------AHL20(2)   --------->TOE2(3)  <---------ANAC58            --------->AHL20(2)             - --------->AHL20(2)  ----------->GT1--------->ZAT2  <-----------GT1  <---------AHL20(2)             - ----------DOF2     <---------TOE2(3)    <---------ANAC58           --------->ICU4               ---- --ANAC46  --------->ANAC58    <---------TCP20 <---------DAG2       <---------AHL20(2)         ------   tgatttattgcgcatgcaacttgacgttaattggacccaccttgcttaacctttttcctcttcttgtgaaattattttggtgtgtgagaatggaatcaac  25360500 -------->ANAC58 -------->ANAC58 -------->ANAC46                                       <---------YAB1--------->DAG2 -------->bZIP60(2)   --------->ICU4         <-------TEIL   --------->ANAC55(2)             --------- --->GAMYB            <---------ATHB51      --------->CCA1(2)       ---------->DOF2      --------->DAG2 -->P           >>>>>>>>>TBF1          ------>ZmHOX2a(1)    <---------ANAC55(2)         ---------->DOF2   ccaagtcattttagagaagaagaaataatgcaaaatgtttcctaagattcaaatttcatgatacctgataaaaagtgtttggctgaactaaaaagtgttg  25360600                                                                                   --------->ATHB12                                                                                  <---------AHL20(2)                                                                                  <---------YAB1                                       --------->ATHB12                          --------->AHL20(2)                              --------->ZAT2                                     --------->AHL20(1)                              <---------ZAT2                           <---------ICU4                              --------->At4g35610                      --------->ATHB12                              <---------At4g35610--------->ANAC58      <--------HAHB4                             <---------ARR14(2)  --------->ANAC58     <---------ATHB12                   --------->ANAC58   <---------YAB1    ----------->GT1--------->YAB1                   --------->ANAC58   --------->ICU4   <------ZmHOX2a(1)        --------->YAB1             <---------YAB1  --------->ARR14(2)--------->MYB52(1)     --------->ICU4     ----------->GT1      --------->ANAC46 <---------AHL20(2)         <---------YAB1 <---------WOX13(1) >ALFIN1  --------->ICU4--------->MYB52(1) --------->AHL20(2)    --------->ANAC46<---------AHL20(1) <   ttcagaaatgtaattctgatcaagctaaacggagctggttatgatttaaaaacggaaggagtaatatcagccatcattacaaatataattggctcaacag  25360700                                                                              <---------ANAC46                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                          <-------PIF5                                                                          ------->MYC2                                                                          <-------MYC2           <---------GLK1(2)                                              ------->PIF5         <---------TOE2(3)                                                ------->MYC3         <---------YAB1                                                  --------->ANAC55(2)         <---------TOE1(3)                                               ===================bZIP_DOF    <--------ATHB1                                                       --------->TGA1a    <--------HAHB4                                                       <---------TGA1a    <---------ICU4                                                       <---------ANAC58    -------->HAHB4                                             <------ZmHOX2a(1) ---------->DOF2    --------->ATHB51                                     --------->ZAT6  <---------ANAC46    --------->YAB1                                       --------->ANAC58--------->O2   --------->AHL20(2)                                    --------->ANAC58<---------ANAC55(2)   <---------ATHB12                                    <---------DOF5.7(2)<-------MYC3   <---------YAB1                                      --------->MYB52(1)<---------O2   <---------ATHB51                                 <---------At4g35610  <---------bZIP60(2)   --------->ICU4                                   --------->ANAC46     <---------ANAC58 --------->YAB1                                     --------->ANAC55(2)------------->DYT1        ---- ---------YAB1 <---------YAB1     <-----------GT1  <---------TOE2(3) <-----------HVH21         ------   ttctaataattaagattatcaaaccgatagcacttaatactgtattcaacattcaggtaacgctaggaatgagtcacgtggcttaaagaaaaaaaacaca  25360800  Previous    Next  AGI:  At5g63180.1    Description:  pectate lyase family protein. Identical to Probable pectate lyase 22 precursor [Arabidopsis Thaliana] (GB:Q93Z25;GB:Q9FMK5); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT4G24780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42465.1); similar to Pectate lyase [Prunus mume] (GB:BAE48664.1); similar to unknown [Populus trichocarpa] (GB:ABK94358.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectate lyase/Amb allergen (InterPro:IPR002022); contains InterPro domain Parallel beta-helix repeat (InterPro:IPR006626); contains InterPro domain Pectin lyase fold/vi Range:  from: 25358180    to: 25360345    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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