Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------ARR14(2)                                                              --------->ARR14(2)                                                             <------ZmHOX2a(1)                          <---------DDF1                    --------->HSFB2a(1)                          ----------->RAV1(1)               --------->HSFC1(2)                         --------->DEAR3(1)                 <---------HSFC1(2)                         --------->DREB2C(2)          <---------LBD16                --------->ANAC58                         --------->At1g77200       <---------ZAT14            ------>NtERF2                         ----------->HVH21         --------->ZAT14            --------->LBD16                         --------->DEAR4(1)     <---------ANAC46             <---------LBD16                        --------->DEAR3(2)      <---------ANAC58            <---------LBD16                     ------>ZmHOX2a(1)          <---------ANAC58------>ZmHOX2a(2)    --------->ANAC58                 <---------ARR14(2)       <---------TOE2(2) <---------HSFB2a(1)    --------->MYB52(1) ---->DAG2       --------->ARR14(2)    <---------DAG2 --------->At4g35610 --------->GLK1(2) ---->DOF2   <------ZmHOX2a(1)         <----------DOF2<---------At4g35610<---------GLK1(2)     <-----   agtccgtcgaagacaggacaatcctcaccgacattgaatcgccttaggtttcgtgcagcggaaggatcgcccatagattccggcgaaacggaagcgagga  25335200                                            <------NtERF2                                          <---------WRKY12                                         --------->TGA2(2)                                         --------->ATERF1(1)                                         <------NtERF2                                        <-----------HVH21                                        <-----------TGA1                                       <---------ANAC58                                      --------->ATERF1(1)                                      <------NtERF2                                      --------->RAP2.3(1)                                     <---------ATERF1(1)                           ----------->HVH21                                    <---------DEAR3(1)                           <---------At4g35610                              --------->GLK1(1)                           <---------DEAR3(1)  <------           ------>NtERF2      <---------GLK1(1)                         --------->MYB52(1)    -------           --------->LBD16   <---------ARR14(2)                      --------->ANAC46         -------          <---------DEAR3(1) --------->ARR14(2)                --------->GLK1(1)<---------AtMYB61         <---------LBD16    <---------RAP2.6(3)          ------>NtERF2 ----------->HVH21    <-------- -ZmHOX2a(1)         --------->ARR14(2)<---------ANAC58 <---------RAP2.6(2)  --------->ALFIN1--------   agtcaacatactccggcgaatggaatcggccgatatcggaggcgtcagcgaggctagggcgactgatttctaagcgacggtggaggtgatagtgaatgat  25335300                      --------->ALFIN1                     <---------MYB52(1)                    --------->LBD16                  <---------LBD16                  ------>ZmHOX2a(2)                                                                 <                 <------ZmHOX2a(2)                                     <------NtERF2                <                --------->ARR14(2)                                    ------>NtERF2               <--                <---------ARR14(2)          <---------WRKY18(1)       <---------DEAR3(2)       ------             --------->ANAC46              --------->WRKY38(1)       <---------RAP2.3(3)       ------             --------->ANAC58              ----------->HVH21         <---------DEAR3(1)        <-----             --------->ANAC58              --------->WRKY12        <-----------HVH21          ------- ---ICU4     <---------ANAC55(2)        <---------ANAC46           ----------------------->TaNAC69(2) -->ATHB12   --------->ANAC55(1)       <------NtERF2              ------>ZmHOX2a(2)        --------->ANAC46 -->YAB1     --------->ANAC55(2)     --------->ALFIN1            <------ZmHOX2a(2)    ------->GAMYB-- -WOX13(1) --------->MYB52(1)     <---------MYB46(3)            <---------ARR14(2)    =============== ->ICU4   <---------SPL7          --------->MYB55(2)            --------->ARR14(2) --------->MYB52(1)   taggctatgagccatacggatccggtgaggcttcatcgggtggccttgaccgtagtagtagtctccgatcgtcggctcgtagaagtaactgactcgccgc  25335400                   <------NtERF2                  ------>NtERF2                 <---------ATERF1(2)                 --------->ANAC46                 --------->ATERF1(2)                 --------->TGA1a          <---------ARR14(2)        <---------MYB46(3)--------->At4g35610      <---------MYB52(1)  --------->CCA1(2)     <-----------HVH21<------NtERF2   <-------TEIL  ============================bZIP_DOF   --------->SPL7<---------DEAR3(1) ---------ANAC58--------->SPL7 ---------ANAC58--------->RAP2.6(3) -------TGA2(2)--------->MYB52(1)      <---------At4g35610 >NtERF2<---------DEAR3(2)<---------At4g35610  <---------ALFIN1 --->At4g35610 ------>NtERF2  <---------RAP2.6(2) ----At4g35610----------->HVH21      <---------ANAC58               --------->GLK1(2) -->DEAR3(1) --------->DEAR3(2)      <---------ANAC58              <---------GLK1(2) ------->SPL7<---------HSFB2a(2)------>NtERF2------>NtERF2      --------->YAB1 ==========================MYC_MYB<----------DOF2      <---------CCA1(2)             <---------GLK1(2)   ttacgtccgtcgggtcccgacggcagagagatgccgctttcgtctgcctccatctccgtctctcactcagaatctctctctcactcagagtctctctcta  25335500                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                         *TSS                 <------                                                                       <---------At4g35610    -------                                                                  <---------PCF2              <------                                                                  --------->ZAT18            <-------                                                             --------->ALFIN1          ------->TEIL                                                         <------ZmHOX2a(1)          --------->ANAC58                                                  --------->ICU4<---------ZAT18     --------->ANAC46                                                <---------ICU4 <---------ANAC46     --------->ANAC58  <---------TOE1(2)                        ---------->DOF2  --------->ALFIN1----------->TBP ---------   ttcccaagttttactcagagcaaaatttgtgtcaacaatgcctgagaaagtcattactaggagttgtgggcacagcttatatatacacgcacattaatga  25335600                                          <-----------GT1                                         <---------YAB1                                       -------->HAHB4                                       <--------HAHB4                                       <--------ATHB1                                       --------->ATHB51                                       <---------ICU4                                       --------->YAB1                                      <---------ATHB51                                      --------->ICU4                                      --------->AHL20(2)                  <---------ANAC58    <---------YAB1       <---------ICU4               --------->YAB1     --------->TOE2(3)      --------->AHL20(1) ----ICU4         <---------ANAC58 <---------YAB1                       --------->AHL20(2) -->HAHB4         <---------ANAC46--------->AHL20(2)                    <---------AHL20(2) --->ATHB12       ----------->GT1 <---------AHL20(2)           <------ZmHOX2a(2) --->YAB1     <----------DOF2    --------->YAB1              ------->GAMYB ---YAB1    <---------YAB1  --------->AHL20(2)              --------->MYB46(3) -->ICU4 <---------YAB1     <---------AHL20(1)             <---------TOE2(3)       <----------------- ---ATHB12 <---------ARR11(3)<---------AHL20(2)           --------->MYB52(1)     --------->ARR14(2) --TOE2(3) --------->ARR11(3)--------->AHL20(2)         <---------MYB52(2)       <---------ARR14(2) >YAB1--------->ICU4        <---------AHL20(2)   ----------->GT1    --------->AHL20(2)       --------   ttacttacattattatctttgcgttaaaaatttaattttaataattactgaatgttaaactaacgatcgattatataattccaaattcgattcaaacata  25335700                                                                                                   <-                                                                                   <-----------GT1 <-     <---------YAB1                                                           =======================   <---------AHL20(2)                                                         ------>ZmHOX2a(2)<-----   --------->ATHB51                                      ----------->GT1    --------->ARR11(3) ------   --------->AHL20(2)  --------->MYB52(1)            ---------->DOF2        <---------ARR11(3) ------ ----WRI1             ------>ZmHOX2a(1)       <---------AHL20(2)  --------->At4g35610       <-------- ->YAB1   <-----------GT1                     --------->AHL20(2)  <---------At4g35610<-----------GT1   gcgaattatttttaacttgttttcctaatggtagacaatgttagacaaataaatgtaaagggttttttagctaagtatgatctatttacacatttcacct  25335800     ----------->GT1     <---------ANAC55(2)     --------->ANAC55(2)    <-------TEIL  --------->ARR14(2)                             <---------HSFC1(1)  <---------GLK1(2)                              >>>>>>>ZML2  <---------ARR14(2)                             --------->HSFB2a(2) <------ZmHOX2a(1)                       <-------TEIL --------TOE1(3)                     --------->ARR14(2) --------TOE2(3)                     <---------ARR11(3) =======HOX2a_HOX2a         ---------->DOF2      <---------HSFB2a(2)                               -- ----DAG2              ----------->GT1--------->CCA1(2)                                           <-- --->TOE1(3)      <---------MYB46(3) --------->ARR11(3)         <---------ANAC58                  <-- --->TOE2(3)  --------->ARR11(3)     <---------ARR14(2)         <---------ANAC58            --------- ---GT1       <---------ARR11(3)   ----------->ARR10<---------ARR11(3)                 --------->ANAC46   taaggattcgtaactagatgttgttgggaaaaaagagaagatatacatgttctagatgttatagatgcttacatttgtctaaattctattcgcaatactt  25335900                                                              <---------WRKY18(1)                                                             --------->WRKY38(1)             <---------ATHB12                                --------->WRKY12           ------>MYB46(1)                                 <-------GAMYB           <---------ANAC46         --------->TOE2(3)                               <---------TOE1(3)        --------->DAG2         <---------MYB59                                 <---------ANAC46        --------->ZAT14       ------>MYB46(1)                                   <---------YAB1  ---------->DOF2       -------->P                                        <---------TOE2(3)--------->DAG2 ----->TEIL------>MYB83                             <---------ZAT6       <---------ZAT14   <---------AHL20(2) -------GLK1(2)                                 <---------ZAT14 <---------ANAC58 <---------ZAT14 -------CCA1(2)                                 --------->ZAT14 <---------ANAC58 ---------->DOF2 >ICU4 ------>MYB83                        <-------TEIL <---------At5g28300   ----------->GT1   gaatctcccaacctaataatccacatccgatttttaaaaacaagtttcattacagtgttacggttgacttgagagtaaagtagtaaagtgtatttagttg  25336000                                              >>>>>>>>>TBF1                                           >>>>>>>>>TBF1             ----------->GT1            >>>>>>>>>TBF1             --------->At4g35610            --------->DAG2       --------->YAB1          --------->At4g35610     ----------->GT1          ---------->DOF2      --------->ARR11(3)     --------->At4g35610----------->GT1            -      <---------TOE2(3)        <---------ARR11(3)>>>>>>>>>TBF1    <---------At4g35610      <---------MYB46(3)   atagaattaagaaaaaggcaaaatgtttagaaatatcatgaagaagaagaagaagaagcagcgaaatcagctaaatagttatatagtaaatgtttgttct  25336100  Previous    Next  AGI:  At5g63110.1    Description:  HDA6 (HISTONE DEACETYLASE 6); histone deacetylase. Identical to Histone deacetylase 6 (HDA6) [Arabidopsis Thaliana] (GB:Q9FML2;GB:Q9FVE5); similar to HD1 (HISTONE DEACETYLASE19), histone deacetylase [Arabidopsis thaliana] (TAIR:AT4G38130.1); similar to HD1 (HISTONE DEACETYLASE19) [Arabidopsis thaliana] (TAIR:AT4G38130.2); similar to histone deacetylase [Triticum aestivum] (GB:AAU82113.1); similar to histone deacetylase [Zea mays] (GB:AAL33653.1); similar to histone deacetylase [Zea mays] (GB:NP_001104901.1); contains InterPro domain Histone deacetylase; (InterPro:IPR003084); contains InterPro domain Histone deacetylase superfamily (InterPro:I Range:  from: 25332850    to: 25335573    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g63120.1    Description:  ethylene-responsive DEAD box RNA helicase, putative (RH30). Identical to DEAD-box ATP-dependent RNA helicase 30 (RH30) [Arabidopsis Thaliana] (GB:Q8W4R3;GB:Q0WVX4;GB:Q9FML1;GB:Q9ZRZ7); similar to DEAD box RNA helicase, putative (RH20) [Arabidopsis thaliana] (TAIR:AT1G55150.1); similar to DEAD-box ATP-dependent RNA helicase 30 (GB:Q5N7W4); similar to Os01g0911100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045158.1); similar to putative DEAD box RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD82427.1); contains InterPro domain RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014); contains InterPro domain Helicase, sup Range:  from: 25335978    to: 25339491    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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