Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            ---------->DOF2                                                                   --------->At4g35610                                                                 --------->YAB1                                                              <---------GLK1(1)           ------->MYC2                                                              --------->GLK1(1)           <-------MYC3                                                             <---------ARR14(2)           ------->MYC3                                                             --------->ARR14(2)           <-------MYC2 --------->TOE2(3)                                           --------->ARR11(3)          <----------TaMYB80 ----AHL20(1)                     ---------->DOF2            <---------ARR11(3)         ---------->TaMYB80 ----AHL20(2)          <<<<<<<<<<<<<<<<<LFY              <---------At4g35610  --------->YAB1 --->AHL20(2)        ----------------->AGL1   <------ZmHOX2a(1)--------->ARR11(3) ---------->DOF2 >>>   atttcttaaacagagcttccaatgccaacaatggaagaaagaaacagaggaaaacttgctgcagatatcatcagaaaaaagcataaaaggcatatgcgaa  25313700                                   --------->TGA2(2)                                  <-----------TGA1               --------->ANAC58  <---------bZIP60(1)               --------->ANAC58  --------->ANAC55(2)           <---------ANAC58      --------->bZIP60(1)           <---------ANAC46     <-----------STF1           <---------ANAC55(2) <-----------GT1           --------->ANAC55(2) --------->MYB52(1)                      <---------DAG2   --------->ANAC58       ---------->DOF2                              <----------DOF2   --------->ANAC58  <---------AHL20(2)                        <---------GLK1(2)     <----------ID1 ---------->DOF2     --------->AHL20(2)--------->YAB1        <---------ATHB12        ----------->GT1 >>>>>>TBF1<---------ANAC58--------->DAG2      <-------TEIL  <---------YAB1      ---------->DOF2   gaagaaagccattgcgtaagaaattaaaaaaagtaacgtcatcgtaacattcatccaatttccatgattctcgctttttggctaaaagagaaaaaacaaa  25313800                                  ----------->HVH21    --------->LBD16                         <---------ANAC55(2)       <---------ARR14(2)                         --------->ANAC55(2)       --------->ARR14(2)                         --------->ANAC46  --------->ARR14(2)                         --------->ANAC58  <---------ARR14(2)                         --------->ANAC58  --------->GLK1(2)      <---------TOE2(3)    <---------ZAT18      --------->ANAC55(1)      <---------GLK1(1)       <---------GLK1(2)    --------->ZAT18   --------->ARR14(2)  <---------GLK1(2)<------ZmHOX2a(2)         <----------DOF2   accttgtgcgcatgttgggattcagacacgcaacttcggacagagaatctgcagttccgagatcgattaatgttcaaattcttcgagcttttgaaattga  25313900                                                          <-----------GT1                                                     --------->ICU4                                             --------->ANAC46--------------->AGL15                   --------->At4g35610    <---------REM1(2)  <---------------AGL15                   <---------At4g35610   ====================================MADS_MADS              <-------GAMYB  --------->ARR14(2) ----------->GT1             <---------MYB46(3)          <---------------AGL15            <---------GLK1(2)         <     --------->At4g35610     ------->TEIL--------------->AGL15 <----------DOF2            <---------WOX13(1)   ctgaagcagcaacgatggttgagctgaaacgaatcgacattgactacaaggagtaaaaatttactctttagagtttgattctcagaaattagattgatga  25314000                ---------->DOF2          --------->HSFC1(2)          <---------HSFC1(2)                             --------->GLK1(2)        <-------TEIL  <---------GLK1(1)                                     <---------GLK1(2)  *TSS  --------->CCA1(2)  --------->GLK1(1)       <----------DOF2     --------->YAB1             <----------DOF2 ------ZmHOX2a(1)  --------->ZAT2 --------->ANAC46<---------GLK1(1) <-----------GT1   gaggaattcggaagtttcaaaagctgggctttgttcaccacagagcaagaagaattcagaatttggaattttgcgatttatagatacagaagcgaaacag  25314100                                                                                     <-----------RAV1(2)                                                                                 --------->LBD16                                                                               ------>ZmHOX2a(2)                                                                               <---------LBD16                                                                              <------ZmHOX2a(2)                                                            <----------DOF2   --------->ARR14(1)                                                      <---------ANAC55(2)     --------->CCA1(2)                                                      --------->ANAC55(2)    --------->ARR11(1)                      <---------YAB1                 --------->SPL7          <---------ARR14(2)    <-                     <-----------TBP                 <-------TEIL            --------->ARR11(3)   ---                   <----------DOF2                 --------->ARR14(2)        --------->ARR14(2)  <---                   <---------DAG2              <---------LBD16               --------->AGP1     -----                  <---------DAG2   <---------ANAC58<---------ARR14(2)      ----------->ARR10<--------             <-----------GT1       <---------ANAC58<---------SPL7  <---------LBD16  <-------TEIL<----   aggcatatgtttttgtttcccctttttatagactcttgcttcttatacacacgggtacgggtctttttatctgggtttagatccggttcagggtctcgga  25314200            --------->LBD16          <---------LBD16          ------>ZmHOX2a(2)         <------ZmHOX2a(2)        <---------ARR14(2)    <-------TEIL  ------->MYC3                             --------->AHL20(2)  <-------MYC3                <---------ICU4  ------->MYC2   <------MYB46(1)          <---------AHL20(2)  <-------MYC2   <------MYB83--------->ICU4<---------AHL20(2) --------ALFIN1 --------->MYB59           --------->AHL20(2) --->ZmHOX2a(2) --------->MYB46(2)        <---------AHL20(1)                          --------------- ---ZmHOX2a(2)  <---------AtMYB61         --------->AHL20(1)                        --------->YAB1 ---->ARR14(2)  --------->MYB111(1) <---------MYB59                                <---------YAB1 -LBD16 --------->ARR14(2)  --------->TOE2(3)    <---------ANAC58                --------->YAB1 -----ARR14(2)<---------MYB52(1) <-----------GT1 <---------ANAC58        ---------->DOF2   tccacgttcggatccggtttggtatttctacattattaccaaaatttatttgcttagccagaagtttgtattttgtaaagacatcatcatagtactacat  25314300                            <-----------GT1   ----------->GT1                                     ---                       <----------DOF2       <---------TOE2(3)                               --------     --------->ZAT14--------->ARR11(3)  --------->ATHB51         <---------ICU4          <---------ANAC55(2) <-----------GT1    <---------ARR11(3) <---------AHL20(2) <----------ID1              <------ZmHOX2a(2) >AtSPL8        --------->At5g28300    <---------YAB1--------->YAB1                 <------ZmHOX2a(1)   atataactacacactcgcagtaaatctttttttctctctgtataattgaagttaaaaataacaacaaaaatggcagtttatatggaggatcacataaaaa  25314400                         --------->ATHB12                        <---------YAB1        <---------AHL20(2)                 <---------AHL20(1)        --------->AHL20(2)    --------->ARR11(3)        --------->AHL20(1)    <---------ARR11(3)       --------->AHL20(2)--------->YAB1    --------->AHL20(2)       <---------AHL20(2)-------->HAHB4    <---------AHL20(2)                                     ---     --------->YAB1     --------->ICU4     --------->AHL20(1)             <---------ARR11(3)      --- -------->GT1         <---------ICU4      --------->AHL20(2)             --------->CCA1(1) ---------- ->AHL20(2)       ------>ZmHOX2a(1)       <---------AHL20(2)             --------->RVE1(1)<---------TOE2(3)   tagttaaaaataatttagtcctagtaattataggtcttctctaattttatttggaactaaatttcagaaaacaaaatatcgtatcaaattttgatgtaaa  25314500                                               <---------ARR14(2)                                             --------------->AGL15         <-----------------AGL1                                            <-----------------AG           <---------At4g35610                                        <------------CBF             --------->ARR14(2)                                       <------ZmHOX2a(1)             <---------ARR14(2)    --------->AHL20(2)                <---------YAB1              --------->ETT(1) --------->AHL20(2)                  <---------TOE2(3)         <-----------RAV1(1) ------>YAB1                   <---------------AGL15         --------->CCA1(2) ------>AHL20(2)               <---------YAB1<---------------AGL15<---------ANAC46   <--------P ->GT1--------->YAB1           ==============================MADS_MADS  <---------AHL20(2)         --   ttataaaataatagaaattagtgagatagcattctaaatgaggattgcatattttggtattagatatgtcggattttatctgatatggtagttttcagtg  25314600  Previous    Next  AGI:  At5g63060.1    Description:  transporter. similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT4G08690.1); similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT4G08690.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO64285.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074) Range:  from: 25312180    to: 25314075    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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