Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->ANAC58                                <---------ALFIN1                              --------->ANAC46                         <---------TCP20--------->ANAC58                         --------->ARR14(2)                         <---------ARR14(2)                 --------->YAB1                       --------->HSFC1(2)                  --------->MYB46(3)                       <---------DEAR3(2)                 -------->P                       --------->HSFB2a(1)        <-------TEIL          <---------At4g35610 --------->ANAC58    ------>ZmHOX2a(2)          --------->At4g35610 --------->ANAC58   <------ZmHOX2a(2) ------>GLK1(2)        <---------HSFC1(2)       <---------ARR14(2)                  <---------ALFIN1 ------GLK1(2)         <---------HSFB2a(1)      --------->ARR14(2)  <---------HSFB2a(2)        ------   aatcccaatctcatcttccattagacggttccacgcactctcaagcattggatccatagcaaccataggtctagtaggcctctcttccactcttgctgca  25302800                                                                                          <---------ANAC58                                                                                          <---------ANAC46                       <---------ARR11(3)                                                 <---------ANAC58              ----------->RAV1(1)                                                      <--------P              <---------ALFIN1                                                        <---------MYB52(1)              --------->AtMYB61                                                       --------->At5g28300             --------->MYB46(3)             --------->TOE1(3)                        ------->GAMYB           --------->RAP2.6(2)              --------->TOE2(3)                 ----------------->AG          --------->MYB46(3)              ------->TEIL                        --------------->AGL15         --------->At4g35610             <---------ARR14(2)      <---------ICU4   --------->MYB52(1)         <---------At4g35610             --------->ARR14(2)     <---------YAB1<---------------AGL15        --------->ANAC46         --------->GLK1(1)         --------->YAB1    <-----------------AGL1 --->REM1(1)------>NtERF2     --------->LBD16         ------>ZmHOX2a(1)      ----------------->AGL1--   tcaactctctcagccaccacagcgaaatctccctgatatcgaagaacctcaacttcctctatcatcttcattactctcttcccataacggtagcttgaga  25302900                                                         ----------->HVH21                                                         ----------->TGA1                                                       <---------ICU4                                                  ------>ZmHOX2a(2)                                                 --------->GLK1(1)                                                 <------ZmHOX2a(2)                                                <-----------ARR10                                                <---------AGP1                                <------  --------->GLK1(2)                             <---------ARR11(3)  --------->DOF5.7(2)   --------->REM1(1) <---------GLK1(2)        --------->ANAC46      --------->ARR14(2)  <---------MYB52(1) <---------ANAC58 <---------ARR11(3)  ---------->DOF2            <---------ARR14(2) <-------GAMYB <---------YAB1 --------->ARR10  ----------->RAV1(1)           --------->ARR11(3) --------->TOE2(3)   <---------ANAC58   caagattcttggaacaaaacccacaaagacacaacctttggacttgaacagatctcattctgacgagttcgttaactcgaggtactattgcttcaacttt  25303000                                                                     --------->ARR11(3)                                                                     <-----------ARR10                                                                     --------->ARR14(2)                    ---------->DOF2                                  <---------ARR14(2)                  ------->GAMYB                                      <---------ARR11(3)               --------->MYB52(1)                      --------->ARR11(3)               ----------->RAV1(1)                     <---------ARR11(3)                   <--------              --------->ANAC46                         --------->GLK1(2)        <----------DOF2    <- ----DOF2 --------->AtLEC2               <----------DOF2          --------->MYB46(3)        ---------   tgaaacccatccttgcacaacagaaagtcgttgtaaacctcgtctttcttcagacaaaatctttctcaacaaatcttctcgtctttgctcaatctgctca  25303100                     --------->GLK1(2)                    <---------ARR14(2)                    --------->ARR14(2)                    <---------GLK1(2)               <-----------HVH21            <---------At4g35610            --------->At4g35610                                                                  ----       <---------ZAT14                                                                           <---       <---------At4g35610          <---------YAB1           --------->ANAC58                --------       --------->At4g35610     --------->ANAC46              --------->ANAC58                <-------       --------->ZAT14         --------->ANAC58        ------>ZmHOX2a(1)             <---------At4g35610 -At4g35610 --------->ZAT2     --------->ANAC58       --------------->AGL15          --------->At4g35610 --------ARR11(3)  <---------At4g35610 ------->TEIL   <---------------AGL15        <---------WRKY12 >At4g35610 <---------ZAT2 ------>ZmHOX2a(1)  <-----------GT1--------->ANAC46    <-----------HVH21   agagctctctgcagagctgtcagattctcctctaagccatgaatgtaatctccattcctgtttaagcaactacaaacattcttcgtcaactgatcacatg  25303200                             <---------ANAC46                                                <-------                            <---------TOE1(2)                                                <-------                           ------>ZmHOX2a(1)                                                 --------                          --------->TOE2(2)                                                  --------                    ------>MYB83                                                          <---------At4g35610 ----->ARR11(3)     ------>MYB46(1)                                                       --------->At4g35610 ------ARR11(3)   ------->GAMYB                ----------->GT1            >>>>>>>>>TBF1----------->ARR10 ->ANAC55(2)      --------->AtMYB61    ---------->DOF2          --------->ZAT14    <------ZmHOX2a(1) --ANAC55(2)     --------->MYB46(3)  --------->ANAC46         <------NtERF2    ---------->DOF2      -   atattgatacagagacacaacctcccatcctgcgtttacacaaaagaagaagtaaacttgtggcagagaactagaagaagaaaaaggataagagctgctg  25303300                                                                          <---------HSFC1(2)                                                                          <---------HSFB2a(1)                                                               <---------------AGL15                                                               --------------->AGL15 --At4g35610                                          ------------>CBF    --------->HSFB2a(1) --ZAT2    ------------>CBF                          <-----------GT1      --------->HSFC1(2) ->ZAT2<------------CBF                   --------->YAB1    --------->GLK1(2)                 ------- ->At4g35610                ---------->DOF2      --------->TOE1(3)  ----------->GT1   ---------->DOF2 ---------->GT1 --------->YAB1     <------NtERF2 --------->TOE2(3)---------->DOF2--------->ANAC46   agttgtgaaaattgacaataatccaaactctaaagtcgtcgctattgtaaactttaaacaatattctgaaaagagaaatttctacgaaaaaagactaaaa  25303400                                                                                                    -                               ------->GAMYB     *TSS                       ----------->GT1     <----                              --------->ANAC58  <---------ICU4             ----------->GT1     ------                         <-----------GT1     --------->YAB1            ---------->DOF2         ------                    <---------DAG2        <----------DOF2           <---------WOX13(1)         ------              --------->YAB1  --------->ANAC46  <---------AHL20(2)--------->ATHB12             ------  <---------YAB1    <----------DOF2  <-----------GT1        <---------TOE2(3)                 ------- --->DOF2  ---------->DOF2    --------->ANAC58 --------->AHL20(2)<---------YAB1               <------   gagtatcatttcagaaagataactttttttcaacgcaaataactctttaataaatattgactgaggtttgattgaaagagataaaaacttcatttgccag  25303500        --------->ANAC58  <---------WOX13(1) <---------ARR14(2) --------->ARR14(2) -------->ATHB12                            <---------ANAC58 --NtERF2                                   <---------ANAC46 --->ANAC46                 --------->At4g35610 --->ANAC58          --------->At4g35610    <---------bZIP60(2) >NtERF2--------->ANAC58<------ZmHOX2a(1)   <---------ANAC58 --->ANAC58       <---------At4g35610       <---------O2 <---------MYB46(3)     <-------TEIL -->ATERF1(2)     --------->ZAT2         <-----------RAV1(1)             --------->CCA1(2) ---ATERF1(2)     <---------ZAT2   <------ZmHOX2a(1)  <----------DOF2>>>>>>>>>TBF1       <---------ANAC46   caagattggcacaaaactcgagcagaggacatctgtaggagttgtgtcgtggtcgtctttggttaagagaagaagaaatgggttcaatgttcagtggaaa  25303600                           <---------MYB46(3)                          <---------ANAC46                          <---------AtMYB61                       <---------AtMYB61                       <---------DEAR3(1)                       --------->ALFIN1                    <---------AtMYB61           ------>ZmHOX2a(2)           <---------TOE1(3)                 --------->ALFIN1              <------ZmHOX2a(2)  <---------MYB46(3)               --------->CCA1(2)        ---------->DOF2<---------At4g35610 <-----------RAV1(2)        --------->ANAC58  --------->ALFIN1    <---------ARR11(3) <---------MYB52(1)          <-------        --------->ANAC58<---------MYB46(3)    --------->ARR11(3)<-------GAMYB    <---------MYB46(3)   ccgaatgagcaaggaagagatggaggtggtggtgaacaaggctaaagagatcgtctctgcttatcccgttgttgtcttcaggtttgttctcgttgaaatc  25303700  Previous    Next  AGI:  At5g63020.1    Description:  disease resistance protein (CC-NBS-LRR class), putative. Identical to Probable disease resistance protein At5g63020 [Arabidopsis Thaliana] (GB:Q8RXS5;GB:O04666;GB:Q9FM50); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12280.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G63350.1); similar to RPS5 (RESISTANT TO P. SYRINGAE 5) [Arabidopsis thaliana] (TAIR:AT1G12220.1); similar to disease resistance protein [Arabidopsis lyrata] (GB:ABB00216.1); similar to disease resistance protein [Arabidopsis lyrata] (GB:ABB00218.1); similar to diseas Range:  from: 25300289    to: 25303228    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g63030.1    Description:  glutaredoxin, putative. Identical to Glutaredoxin-C1 (GRXC1) [Arabidopsis Thaliana] (GB:Q8L8T2;GB:Q8RXH1;GB:Q9FM49); similar to glutaredoxin, putative [Arabidopsis thaliana] (TAIR:AT5G40370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64301.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutaredoxin, eukaryotic and viruses; (InterPro:IPR011899); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Glutaredoxin subgroup (InterPro:IPR014025) Range:  from: 25303449    to: 25304920    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version