Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------AHL20(1)                                                                                  --------->AHL20(2)                                                         ------>MYB46(1)      --------->AHL20(2)                                                         ------>MYB83         <---------AHL20(2)                                                       <---------MYB59       --------->AHL20(2)                                                       ------->GAMYB         <---------AHL20(1)                                                      --------->MYB46(3)     --------->AHL20(1)                                                     --------->ANAC58       --------->YAB1                                 ----------->GT1     --------->ANAC58   --------->AHL20(2)         <-                        --------->YAB1               -------->P   <---------YAB1  <---------AHL20(2)                        --------->ATHB12      --------->ALFIN1  <---------ICU4<---------YAB1       --      ---------->DOF2 <---------WOX13(1)---------->DOF2--------->AtMYB61<---------YAB1  <----------DOF2   cttaagtagaaagaacgatttttgaatgatagagaatgaaaaaaaagagtggagcaaccaaactcatcatgcttataaatataattaattctttgcagta  25288900                                                                             --------->ZAT14       <---------DAG2                                                    --------->YAB1       <----------DOF2          <----------ID1------>ZmHOX2a(2)         --------->At4g35610   <-----------GT1           ---------->DOF2<---------ARR14(2)        --------->YAB1       --------->ANAC58 --------AHL20(2)    ----------->GT1     --------->ALFIN1            <---------YAB1        --------->ANAC58 ------->AHL20(2)   ------->TEIL----------->GT1          --------->TOE2(3)   <---------ZAT14   <-----   tttatttagctttttgtttacgaacgtgaataaaaggaaaaatgtggatcgaaattgaacattaatacattatcatcagaacagagtttgaaaacgcctt  25289000                                      <---------ANAC46             <--------P      <---------MYB59                                    --------->ZAT18         >>>>>>>>>SARD1         --------->TOE2(3)                                --------->DAG2              >>>>>>>>>CBP60g     <---------ALFIN1   --                               ---------->DOF2      --------->TOE2(3) ---------->DOF2    <-----------GT1 -----DOF2                  <----------DOF2   --------->AtMYB61   <-------GAMYB----------->HVH21   <-   tgtataaaaccagcactagttttatttgggcttaaaagtggcctaagaccaaaacattagaaatttggggttgaaagaggcccgacctaaatcacattct  25289100                                                                --------->At4g35610                                                             ------>NtERF2                          <----------DOF2     <---------At4g35610                          <---------TOE2(3)              --------->ARR14(2)  <---------YAB1          --------->At4g35610           <---------WOX13(1)              <---------MYB52(1)<---------AHL20(2)     ------>NtERF2           --------->ARR14(2)            <---------ANAC58   --------->AHL20(2)   --------->At4g35610        <---------MYB52(1)            <---------ANAC58   <---------AHL20(2)   <---------At4g35610      <---------ANAC58     <----------DOF2      --------------->AGL15  ------>NtERF2  <---------At4g35610     <--------P ------->HSFB2a(2)    <----------DOF2         --------->At4g35610  ------>NtERF2   ------>ZmHOX2a(1) --------HSFB2a(2)------>ZmHOX2a(1)        ------>NtERF2  <---------At4g35610<---------ANAC58   tctagggctttgttccgttcctctctttctttatttattattctctgcctctgcctctgcctctgcctctgcctctgttccgttcctctggttgatgttg  25289200                                                                                                    -                                                                 <------ZmHOX2a(2)                  <                                                                <---------ARR11(3)                  <                                                                --------->ARR11(3)                  -                                                      --------->CCA1(2)                             <                                                     --------->ARR14(2)                    <---------ANAC58                                                     --------->ARR11(1)          --------->ICU4     -                              --------->ZAT14        <---------ARR14(2)          <---------YAB1     <                    ----------->GT1                  <---------ARR11(3)        <---------At4g35610  <     --------->ANAC58         <---------ZAT14        --------->ARR11(3)<------MYB83 <---------YAB1---     --------->ANAC58<-------GAMYB--------->ALFIN1 <---------TOE2(3)   <------MYB46(1)     <---------ANAC58   tgagggtaagacagaactaagtctgttaaatctacagtgagggttttttgtttaagatatggacaagatcagtgggttttctgatgatgaattgctcgtg  25289300  ------>ZmHOX2a(2)                                                           <---------PCF2 <------ZmHOX2a(2)                                                          --------->LBD16 -------->ARR14(3)                                                         <---------ANAC58 ---------ARR11(3)                                                 <----------DOF2 ---------ARR14(3)                                            <---------HSFC1(2) -------->ARR11(3)                                            --------->HSFB2a(1) -----------ARR10                                             --------->HSFC1(2)               <----- -------->ARR14(2)                                            <---------HSFB2a(1)<------NtERF2 <----- ---------ARR14(2)              --------->YAB1      --------->ANAC46       <---------ANAC58   ------- ---------AGP1      <---------AHL20(2)              --------->ANAC58       <---------ANAC46<---------ANAC58 -------->ARR10     --------->AHL20(2)              --------->ANAC58      <---------LBD16  <---------ANAC58   aagatcttatcgtttcttccatttaaatttgctataacaacgagtgttttgtcgaagcaatggaagtttctttggatgcgggtgccaaaacttgagtacg  25289400                                   <---------RVE1(1)                                  <---------MYB52(1)                         <-----------GT1                        --------->KAN4(2)                       <---------KAN4(1)                       <----------TaMYB80                       --------->HSFB2a(1)                       --------->KAN4(1)                              <---------ARR14(2)        -----                       <---------HSFB2a(1)                        --------->At4g35610          ------                       --------->HSFC1(2)                    ----------->HVH21               <------- <---------YAB1       --------->ARR14(2)                   <-------GAMYB                     -------- ----TOE2(1)          <---------ARR14(2)                <------ZmHOX2a(1)                 ---------->DOF2 ----TOE1(1)          ---------->TaMYB80              <---------TOE2(3)                <------------- -->SPL7              <---------KAN4(2)   <-----------GT1 <---------MYB46(3)           --------------   atgaagatagcatgtattctttcgaatattccttccgatattttttacctaaggctaaggaggttgacagcgaaacctattctatagtgtccgaaagcgg  25289500   <------ZmHOX2a(1)                                            <---------ANAC46 ->NtERF2                 <---------ARR14(2)                <---------ANAC58 --->RAP2.6(2)            --------->GLK1(2)                 <---------ANAC58 --At4g35610              --------->ARR14(2)              --------->ARR11(3) ->At4g35610             <---------GLK1(2)       <-----------HVH21                             ------ ----AGL1     <---------AHL20(2)                --------->LBD16 <---------ANAC58              ------- --->AGL1   <----------DOF2--------->At4g35610<---------LBD16   <---------ANAC58   <---------TOE2(3)   ccataggatgcggtcttttattgagaagaatctgccattacatagctctccggtcatagagagcttgcgtctcaagtttttcactgaggtatttcaacct  25289600                                                                      --------->ANAC58               <-------GAMYB                                <----------DOF2  --------->GLK1(1)                                         <---------DAG2  --------->CCA1(2)                                     --------->WRKY12 <---------ARR11(3)         <---------ARR14(2)          --------->WRKY45 --------->ARR11(3)         --------->ARR14(2)          --------->WRKY38(1) --->TOE1(3)<---------ANAC46<---------GLK1(2)          --------->DOF5.7(2)                     ------ ---->RAV1(2)  <---------ANAC46               <---------ARR11(3)      --------->ANAC58         ------   gaagatatcaaattgtgggttgaaattgcagtttctcgttgtgctcaagagctaagcgttgacttttttcccaaggaaaaacacaatgcattactgccga  25289700                        ----------->HVH21                    <---------ANAC46                    <---------ANAC58                                                 <---------ANAC58                    <---------ANAC58                                                 <---------ANAC58           --------->ANAC46                                               <-----------GT1           --------->AtLEC2                                     ------>ZmHOX2a(1)    ---------------- --->LBD16 --------->ANAC58                         <---------ANAC46     <-----------GT1           -- >NtERF2   --------->ANAC58           <---------TOE2(3)    --------->KAN4(2)         <---------ANAC46   gaaacttgtatacatgcaaatcgcttgtgacattgaaattaagaaacaacattctcgtggatgttcctcatgttttttccctcccttccttgaaaatttt  25289800  Previous    Next  AGI:  At5g62960.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10660.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10660.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10660.4); similar to unnamed protein product [Vitis vinifera] (GB:CAO64308.1) Range:  from: 25286508    to: 25288867    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g62970.1    Description:  F-box family protein. Identical to Putative F-box/FBD/LRR-repeat protein At5g62970 [Arabidopsis Thaliana] (GB:Q9FM55); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G56410.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 25289259    to: 25290763    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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