Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->AHL20(1)                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                         <---------AHL20(2)                                                 --------->LBD16         --------->AHL20(2)                                                <---------LBD16       <--------HAHB4         --------                                           --------->YAB1             --------->ATHB51      ------>ZmHOX2a(1)                   ------>ZmHOX2a(2)      <---------ATHB12            <---------ICU4      -----------                 <---------ARR11(3)      <-----------HVH21           --------->ICU4     --------->ARR14(2)                 --------->ARR11(3) --------->ARR14(2)               <---------YAB1     <---------ARR14(2)        <---------ANAC58            <---------ARR14(2)             --------->YAB1 --------->TOE1(3) -->AHL20(2) <----------DOF2       <---------CCA1(2)          <---------ATHB12 <-----------GT1 --YAB1 <---------ANAC58        <-------TEIL  --------->MYB52(1)--------->WOX13(1)--------->TOE2(3)   atgtttgtttgcttactttgatcttcttcaagagttcatatccagtcataccgggcattgagtaatcagtcataattaaattaaccttcaaatcctgaag  25271000                                --------->ANAC58                                --------->ANAC58               --------->ARR11(3)      <---------YAB1           <---------LBD16                                  ------>MYB83    <-----------GT1  <---------ANAC58                                           ------>MYB46(1)    --------->YAB1   <---------ANAC46                                        --------->DEAR3(2)   <---------ATHB12  <---------ANAC58                                 --------->TOE2(3)     ------>ZmHOX2a(1) -->DOF2     >>>>>>>>>MYB98 --------->At4g35610                       --------->TOE1(3)    --------->TOE2(3) >RAV1(2)   <-----------GT1 <---------At4g35610                    <-----------GT1      <-----------GT1   cacaaatcacgatttaacatattgcttgagagctacggcaaaattttgttttctcttggaaattgttttatacctcaaaaccgactgatttttcctcaac  25271100                                                        --------->AtMYB61                                                       --------->MYB46(3)                                                      --------->ANAC58                     --------->ARR14(2)                                                      --------->ANAC58                     <---------ARR14(2)                                       ----------->RAV1(1)                              --------->LBD16                    --------->ARR11(3)--------->MYB46(3)------->GAMYB             <---------ANAC58         --------->ARR11(3) --------->ZAT18         --------->MYB46(3)       --------->At4g35610         <---------ARR11(3) <---------ZAT18  --------->MYB52(1)              <---------At4g35610       <---------TOE2(3)<-----------RAV1(1)--------->At5g28300     <----------DOF2<---------ANAC58   atccaaaccaaggtattggagagctcttgttgcactatcaacaacagtaactgaacaaccaaaacagagctttttactcagataacttgcccgaattcag  25271200                                                                                                  ---                                                                                                  ---                                                                                          <---------DEAR3(1)                           <-----------GT1                                                --------->DEAR3(1)                        <---------ICU4                                                   --------->ATERF1(1)                        <--------HAHB4                                                   <------NtERF2                        --------->ATHB51   --------->ARR14(1)                          <---------ETT(2)                        --------->YAB1    <---------GLK1(2)                            <---------ANAC46                        <--------ATHB1    <---------ARR14(2)                  --------->ANAC46 <-----                        -------->HAHB4    --------->ARR11(3)                  --------->O2-----------                       --------->ICU4     <---------ARR11(3)               <---------WRKY12  --------                       <---------YAB1     --------->ARR14(2)               <---------WRKY38(1)------>NtERF2                       <---------ATHB51 ----------->ARR10                 <------ZmHOX2a(2)<---------ATERF1(1)                     --------->YAB1<---------AtLEC2                  <-----------GT1<-----------RAV1(1)                <---------YAB1--------->TOE2(3)                   ------->TEIL<---------O2--------->ETT(2)   agactgatttttcaaaatatgagtaataattacctttgcaagaagatactctgagcaaacgctcgatgaatttacgatcaacgtgactgtcgtcgacggc  25271300                      ------>ZmHOX2a(2)                 <---------MYB52(1)                --------->LBD16             --------->ARR14(1)             <------ZmHOX2a(2)            --------->GLK1(2)            --------->ARR14(2)                <---------ARR14(2)            <---------ARR14(2)                --------->GLK1(2) ------>ANAC58<---------LBD16                 <-----------ARR10                                     < ------>ANAC58------>ZmHOX2a(2)       <---------MYB46(3)             <---------ARR14(2)     <-------- -NtERF2    --------->ARR11(3)        --------->ATHB12     ------>ZmHOX2a(1)               ------->TEIL >HVH21    ==================HOX2a_HOX2a      --------->ARR14(2)     --------->ARR14(2) --------->MYB46(3) ->ANAC46  <------ZmHOX2a(1)<----------DOF2  <---------GLK1(2)    --------->YAB1     <---------WRKY38(1)   aagaacatgaagaggatccggtgatccaaactttgaagaatggttgagaatctccatcttcctcggtagcataacttcagccattgatcaacgaatgttg  25271400                                                                  <---------------AGL15                                                                --------->AHL20(2)                                                                <---------AHL20(2)                                                        <------MYB46(1)                                                        <------MYB83                                ----------->GT1       <--------P<-----------TBP                          <---------ARR11(3)        <---------MYB46(3)             --------->DAG2     <---------ANAC46    --------->ATHB12                            ----- --------->ARR14(2)       --------->ARR11(3)        --------->MYB55(2)                   ----------->GT1 <---------ARR14(2)       --------->ARR11(1)       <---------AtMYB61                   ---------->DOF2 ------ZmHOX2a(1)     ---------->DOF2 *TSS         --------->ALFIN1                ---------->DOF2 ---RAV1(1) ---------->DOF2--------->CCA1(2)   <------NtERF2  <-----------TBP  ---------->DOF2 ------   gaggatttggaagaaaaaggaagagaaagatatgatgtgaaaccatggtggcagtggttgggccatttatataagtagaaagaaagaaagaaagaaataa  25271500                                            <---------TOE2(3)                                        <----------DOF2                                     <---------ARR11(3)                                     --------->ARR11(3)                                     --------->ARR14(2)                                     <---------ARR14(2)                                     <---------ARR11(1)                <----------DOF2                                    <---------CCA1(2)               <---------ARR11(3)                                  <---------AtLEC2          <---------ANAC58                  -------  ----------->GT1           <---------GLK1(2) <---------ARR11(3)    --------->ARR11(3)       <-------  <----------ID1            --------->ARR11(3)<---------GLK1(2)     --------->GLK1(2)    <---------AHL20(2) ----------->GT1            <---------ARR11(3)--------->ARR11(3)--------->YAB1           --------->AHL20(2) ----->DOF2 <---------YAB1 <---------RVE1(1)<---------TOE1(3)<----------DOF2        <---------AHL20(2) --->AHL20(2)       <<<<<<<<<<GATA-1<---------GLK1(1)       <---------ANAC58 <---------AHL20(2)   aagagggaaaaaatatgaatgaaatcgagagattttgcatatctttaagattttgtcaatttgctttcaaaatctttattttatattttatataaataat  25271600                  --------->AHL20(2)  <------MYB46(1)<---------YAB1  <------MYB83<---------YAB1                               <---------ATHB12  <---------ANAC46<---------AHL20(2)                      --------->MYB52(1) --------->MYB46(2)     ----------->GT1        --------->DAG2 <---------DEAR3(1)<---------AHL20(2)         ---------->DOF2                                -------- -->YAB1   <---------AHL20(2)           ----------->GT1   ------>MYB83                 --------->MYB46(3) --AHL20(2)<---------YAB1            --------->MYB52(1)   ------>MYB46(1)       <----------ID1   agttcggtggatttttattattaaataagttaaaacaaaaaaccgaaataaagtcaaaccaatcggttcaagtttagtcaaaacgaagaacaaaccagaa  25271700                                                                                  <---------ANAC46                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                            --------->ATHB51                                                                            --------->ATHB12                                    <---------ARR14(2)                     --------->AHL20(2)                               --------->MYB52(1)                          <---------AHL20(1)                          ------>MYB83                                  <---------AHL20(2)                          ------>MYB46(1)                              <---------AHL20(2)                        --------->DEAR3(1)                         <---------YAB1 <---------ANAC58                        ------->GAMYB                            <---------AHL20(2)                       --------->DEAR3(2)                       <---------AHL20(2)<---------ANAC58                       --------->MYB46(3)          --------->HSFB2a(2) --------->AHL20(2)                     <-----------GT1--------->ARR14(2)     <----------DOF2 <---------AHL20(2) --->GT1         <---------ARR11(3) <---------MYB52(1) <---------GLK1(1)--------->AHL20(2)  ---------   aatttggaatgggatgcaagatttaaccgacccaaaccgatattcaataacttgtagaattctttttttatttttaaattatttgtgtgtgtttgtagtt  25271800                                                                                           <---------TOE1(3)                                                       <---------ALFIN1                    <---------TOE2(3)                                               <-----------GT1                         <----------DOF2                                        --------->ANAC55(2)                        --------->ZAT18                                        --------->ANAC58                           <---------ZAT14        --------->DAG2                  --------->ANAC46                           <---------ZAT18 ->ID1 ---------->DOF2                  --------->ANAC58 --------->ANAC46          --------->ZAT14   ttttttggtaaaagtgtgtttgtagttgaattgtggaagttcacgcatttaacttctacacttcaatacttcatctacgtagaagttcactttgaggttt  25271900  Previous    Next  AGI:  At5g62920.1    Description:  ARR6 (RESPONSE REGULATOR 6); transcription regulator/ two-component response regulator. Identical to Two-component response regulator ARR6 (ARR6) [Arabidopsis Thaliana] (GB:Q9ZWS6;GB:Q9ZWS8); similar to ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5), transcription regulator/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT3G48100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64409.1); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain CheY-like (InterPro:IPR011006) Range:  from: 25269612    to: 25271438    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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