Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              ------>MYB46(1)                                                                           ----------->RAV1(1)                                                                 >>>>>>>>>MYB98                                                                ------>MYB83------>MYB83                                                                --------->MYB52(1)                                                                ------>MYB46(1)                                                               --------->MYB55(1)                                                              <---------MYB59                                                              <---------MYB111(1)             --------->ANAC58                                 <---------MYB46(2)             --------->ANAC46                                 <---------MYB111(2)             --------->ANAC58                                 <---------MYB52(2)       <---------MYB52(2)                                    --------->ANAC58  <---------ICU4               ----------->GT1---------->DOF2--------->ANAC46                  <-----  --------->YAB1              >>>>>>>>>TBF1 <---------YAB1   --------->ANAC58               <-------- <---------ATHB12         --------->LBD16<---------YAB1      <---------At4g35610   --------->TOE2(3) <---------ATHB51  --------->AHL20(2)  ----------->GT1      ------->TEIL --------->MYB46(3) <--------   tcaataataactaacatgccataaattccgaagaagaaaaattgttataaaagaactatatgcacctaacaaaaaaccaacaaaaccatagtattttctt  25267500                      <---------AtLEC2               <----------DOF2                  <----------DOF2                  --------->ZAT2                <---------YAB1                     <---------At4g35610               <---------ARR11(3)         <---------ICU4                                        <----               --------->AHL20(1)         --------->YAB1                                        <----               <---------AHL20(1)         --------->ATHB12                                      -----               --------->ARR11(3)         <--------HAHB4                                        -----      <---------ANAC55(2)                --------->ICU4                                      ======== -----DOF2    --------->RVE1(1)         --------->GLK1(2)                                    ======== -AHL20(2)    --------->CCA1(1) >>>>>>>>>TBF1      --------->At4g35610                       <------ZmHOX2a(1) ---GT1   --------->AHL20(2) >>>>>>>>>TBF1-------->ATHB1                                   <---------TOE2(3)   tttgggttacataaaaatatctttgtatgaagaagaagaaagaatcattacacagctttcactcacaagattacaagtttgcaaattgcatataaggaaa  25267600                     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                    <---------RVE1(1)                   <---------ARR14(2)                   --------->ARR14(3)                   <-----------ARR10                   <---------ARR14(3)             <---------YAB1           --------->YAB1          <---------YAB1         --------->ARR11(3)         <---------ARR11(3)        --------->RVE1(1) <---------HSFB2a(2)        --------->CCA1(1) --------->HSFB2a(2)    --------->AHL20(2)<----------DOF2                   --------->ARR11(3) -----HSFB2a(1)    --------->ARR14(2)                   <---------ARR11(3)                         -- -----HSFC1(2)     <---------ARR11(3)                  <---------CCA1(2)                        ----- ---->HSFB2a(1)    --------->ARR11(3)            ---------->DOF2                               ------ ---->HSFC1(2) ---------->DOF2               ----------->GT1                           --------->ANAC58 ===========================HOX2a_HOX2a     --------->DAG2                             --------->ANAC46 ==========================HOX2a_HOX2a    ---------->DOF2    <----------DOF2           --------->ANAC58   ctcccaaaaaatatcatcaaagatcttttcagaacacaaaaaaaaaaaggtaaaagtatatctcttttgccatagttagactcaaaaatacgacatcgtt  25267700              --------->ANAC46           --------->ZAT18           <---------ZAT18         --------->ZAT18         <-------TEIL         --------->ZAT14         <---------ZAT18       ------->MYC4       ------->PIF5       ------->PIF4       <-------PIF4       <-------MYC4       <-------PIF5       <-------MYC3       <-------MYC2                        <---------TOE1(2)       ------->MYC2                        ------->TEIL       ------->MYC3                        <---------TOE2(2)      <---------TGA1a                      <-------TEIL      <---------O2                         --------->SPL7      --------->O2 --------->DEAR3(1)   --------->ANAC58      --------->TGA1a------>MYB83       --------->ANAC58     ------------>OsbHLH66--------->HSFB2a(2)       <---------ZAT18    <------------OsbHLH66 <---------HSFB2a(2)    <---------ANAC46    <---------ALFIN1 ------>MYB46(1)    --------->TGA1a                                  <---------At4g35610 ----------->HVH21 --------->DREB2C(2)  --------->ANAC46                                 --------->At4g35610 ------->ANAC46   --------->DEAR3(2)    ===========================bZIP_DOF --------->ANAC58 ---->WRKY12  --------->ANAC58        <---------ALFIN1  <----------DOF2     --------->ANAC58 --->DOF5.7(2)--------->ANAC58      <---------ALFIN1--------->ZAT18     <---------MYB52(2)          <   tacctcacacgtgcacactcaccgacttacagaagaacccacacgtacgttgagggtactttagtcatttagcatcgaacgaaattgtctgagcggagaa  25267800                  --------->AHL20(2)                <---------DAG2                <----------DOF2         <---------MYB52(1)        <-------GAMYB    --------->ARR14(2)    <---------ARR14(2)    --------->GLK1(2)                 <----------DOF2  <---------HSFC1(2)      <-----------GT1                         <---------AHL20(2)                -  <---------HSFB2a(1)   <---------AHL20(2)                   <---------YAB1                        --  --------->HSFC1(2) <---------AHL20(1)                      <---------AHL20(2)                  ----  --------->HSFB2a(1)--------->AHL20(1)        <----------DOF2   --------->AHL20(2) *TSS ------------ ------ZmHOX2a(1) <-----------TBP    <---------DAG2  <----------DOF2            ----------->GT1------   gaggagtttccgttatccctttatatattatctctctcacctttcttctctttttctttgatttttattaaatcaacaaaaatagaaaaaaaaacataaa  25267900           --------->GLK1(2)           --------->ARR11(3)           <-----------ARR10                               --------->GLK1(2)          --------->RVE1(1)                                <---------ARR14(2)          --------->CCA1(1)                                --------->ARR14(2)      --------->AHL20(2)                                  ------>MYB46(1)                    <-------     --------->AHL20(2)                                   ------>MYB83               <-------TEIL   --------->YAB1                                       --------->AtMYB61         --------->KAN4(1) --------->AHL20(2)                                     <---------MYB111(1)       <---------KAN4(1) -------->YAB1                                        ------>NtERF2              <---------KAN4(2) ------->AHL20(2)                                   --------->MYB46(3)           --------->ARR14(2) ----->YAB1<---------ARR11(3)                     --------->ANAC58               <---------ARR14(2) ------------>ANAC81                              --------->ANAC58   <---------TOE1(3)    <----------DOF2 --->AHL20(2)     --------->ANAC55(2)             --------->ANAC46   <---------TOE2(3)    ===========   aataaaaataaaaaatcttcacgtttcttctctctctctctctctctctctcgagccaccaaatctgaattagggtttttgagaatattcatcttttgat  25268000                                                        <---------YAB1                                                     --------->ICU4                                                   <---------ICU4                                             --------->ANAC46                                            <---------LBD16               ------>MYB83                                         ----------->RAV1(2)  --------->ARR14(2)                                      <-------TEIL --------->YAB1         ------>MYB46(1)                                    <---------ARR14(2)<---------ICU4    --------->AtMYB61             ------>MYB46(1)        --------->ARR14(2)--------->ATHB12  --------->DEAR3(1)             ------>MYB83          <------ZmHOX2a(1) <---------YAB1    --------->MYB46(3)            <---------ALFIN1  <-----------TGA1--------->LBD16 --------->ARR11(1)                -----           <---------MYB55(2)--------->O2--------->At4g35610  <---------GLK1(2)            <---------At4g35610           --------->MYB46(3)--------->TGA1a--------->At4g35610--------->ARR14(1)          --------->ZAT2  <---------GLK1(2)      <-----------GT1 <---------At4g35610  <---------ARR14(2)           --------->At4g35610 --YAB1   >>>>>>>>>>>>>>>>>LFY<-----------HVH21   --------->ICU4<-------TEIL      <---------At4g35610 ======================================bZIP_DOF   <---------ATHB12  <------ZmHOX2a(2)      <---------ZAT2   ttcaaattcttcacccactgtgtaatttcactcgtcaggattcatctgcggaatcatgattacagattcgatcaccaacgcttctgctacttcagctccg  25268100        ---------->DOF2      --------->LBD16     --------->HSFB2a(2)     <---------HSFB2a(2)     <---------ANAC55(2)     <---------ANAC46                 --------->YAB1    <---------LBD16                <----------DOF2  --------->GLK1(2)              ------>ZmHOX2a(1)  --------->ARR14(2)       --------->DOF5.7(2)  <---------ARR14(2)      --------->TOE2(3)                                          <---------AHL20(2) <---------GLK1(2)        --------->TOE1(3)                                         <---------YAB1 ---->LBD16            <---------DOF5.7(2)           <----------DOF2          <---------YAB1    <----   agagattccggaaagaagaagagggtaacgttatcctctttgataaatctcattcctttctctgaaattgattcaaagttttgatttttaatggttttgt  25268200                                                              <---------O2                                                              <---------ANAC46                                        <---------At4g35610   <---------TGA1a                                        --------->At4g35610   --------->TGA1a       <---------ANAC55(2)           ---------->DOF2          --------->O2         ----------->GT1       <---------ANAC46              ===================================bZIP_DOF  <---------TOE1(3)       --------->ANAC55(2)   <---------At4g35610              ========================bZIP_DOF       <---------ANAC58      <------NtERF2                    ========================bZIP_DOF       <---------ANAC58      --------->At4g35610            <-----------HVH21     <---------TOE2(3)       <---------ANAC55(1) <---------DEAR3(1)        <------MYB46(1)       <----------DOF2   <----------DOF2        --------->RAP2.6(3)    --------->ZAT2           <---------ANAC58 -----YAB1    --------->HSFB2a(2)   <---------REM1(1)<------MYB83         <---------ANAC58        <--   tattgcattacgttttgcagaacaataagtcggctaagatgaagcagaacaagcttggtctccgtcgtgagcaatggctttctcaaggttaaaacttcat  25268300                                                <-------GAMYB                                                <---------ANAC58                                                <---------ANAC58                                               <------MYB83                                               <------MYB46(1)                                         ----------->ARR10                                     <------MYB46(1)                                     <---------MYB46(3)                                      <-------           <---------TOE2(3)         <------MYB83                                           <--------       <----------DOF2            <---------MYB52(1)         --------->ICU4             --------->MYB52(2) --------DOF2                <---------GLK1(2)<---------AtMYB61                  <---------YAB1   ctttctctcctttaatgtttcaattctgcctgattcgtttggttagatttggttgtctatgtattgattttgggtttttgattttgatattagttgcggt  25268400  Previous    Next  AGI:  At5g62910.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G48070.1); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G48070.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO14872.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 25267884    to: 25269430    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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