Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    >>>>>>>>>RAP2.2                                <---------ARR11(3)                                --------->ARR11(3)                               <---------CCA1(2)                                                  ---                         <---------ANAC46  --------->ARR11(3)                  ------->TEIL       ---                    <---------TOE2(3)  ---------->DOF2                      <---------YAB1      ----- ->GT1 <---------WOX13(1)<---------ANAC55(1) ----------->GT1           <-----------GT1    <---------MYB46(3)   tatacactgatttacacatattaagttatgtgtatatctaaaaaagatagtgactaatttctgaagtagagatttactatgaatttcttcagaggttgaa  25265600                                                                                         <---------AtLEC2                                               <---------GLK1(2)                         <---------ANAC58                                               --------->ARR11(1)                  <---------YAB1                                         <---------AHL20(2)                       <---------AHL20(2)          --------->ARR11(3)            --------->AHL20(2)                      <---------YAB1  --------->At4g35610              --------->TOE2(3)                   <---------ARR11(3)<---------ANAC46 ------>TOE1(2)                   ----------->GT1          ---------->DOF2 <-----------GT1 ------>TOE2(3)               <---------AHL20(2)     <---------TOE1(2) --------->ARR11(3)<---------ANAC58 -->TEIL  >>>>>>>>>>GT-1      --------->AHL20(2) <-------TEIL      ---------->DOF2<---------AHL20(1)   cctaagctaaatgatatagcatgaacaagaatttaaatgttaataaatagattcgtagtatcaaaggcttaaagatttaactattatttttgcttggaat  25265700                                                                                         <---------ICU4                                                                                        --------->ICU4                                                                          --------->ANAC46                                                                          --------->ANAC58                                                                        ---------->DOF2 <---------YAB1                                                                    <---------ICU4    --------->YAB1                                            --------->SPL7          --------->ATHB12  <---------ICU4              --------->GLK1(2)             --------->SPL1(2)       <--------HAHB4    <--------HAHB4            --------->HSFB2a(1)            --------->SPL1(1)       --------->ICU4    <------ZmHOX2a(2)            <---------HSFB2a(1)            <---------SPL1(1)       <---------YAB1    <---------YAB1         ---------->DOF2                  --------->ZAT14        <---------ICU4   <---------YAB1     <---------ANAC46            --------->ALFIN1                <XXXXXXXXXXXXXXXXXXXXXMIR828     <---------ANAC58  --------->ANAC58   <---------ZAT14        --------->YAB1 --------->YAB1     <---------ANAC58  --------->AtLEC2   <---------SPL7   --------->YAB1 --------->ANAC58 <----------DOF2       --------->ANAC58 <---------------AtSPL3--------->YAB1 --------->WOX13(1) <---------DAG2   --------->ANAC46     <------------------SPL14 --------->ICU4 --------->ICU4   ctacttttcgtgaaagattccagccaagcaaacacttggggctctgtacggacactctaaaacataataatcatttaagcaattacgatcattattctat  25265800                                                                                   <----------DOF2                                                                                <---------ALFIN1                                                                             <---------ALFIN1                ----------->GT1                            <---------AHL20(2)--------->ANAC46                <---------MYB46(3)                  <-------TEIL             --------->ANAC58      <---------ANAC58      <-----------GT1        --------->CCA1(2)       <---------ALFIN1 <--------      <---------ANAC58  --------->TOE2(3)  --------->MYB52(1)     <-----------GT1  <---------DAG2   <----------DOF2     ----------->GT1    <---------ATHB51 --------->AHL20(2)--------->ANAC58   ctcttctttcttgtttgtttgttaaatgttaaaccatttatcgaataatggagatacatatataaataaaacctcttccacaccactttttttttttcca  25265900                                                                                            <--------                                                                                        <-----------TBP                                                                                  <---------YAB1                  --------->YAB1                                                --------->YAB1   ----------->GT1<---------ICU4                                           <---------AHL20(2)   <----------ID1<---------YAB1                                            --------->AHL20(2)   --------->ANAC58          --------->AHL20(2)               <------------CBF --------->ICU4  ------   --------->ANAC58 <---------YAB1--------->YAB1            <---------YAB1 --------->AHL20(1)  <----- ---GT1          --------->ICU4   <---------ICU4   <---------YAB1    ----------->GT1----------->GT1   tagaaacgaaaaatagttgatgatgacaaaatgaaataataacatgaaaacttatacttatagttattgtatagaaataaaatgatgagtatatataatg  25266000                                                                               ----------->HVH21                                                                              <-----------HVH21                                                                              --------->LBD16                                                                             <---------O2                                                                             --------->TGA1a                                                                             <---------TGA1a                                                                             --------->O2                                                                             <---------ANAC46                                                                           --------->LBD16                                                                           ------>NtERF2                                                                          --------->DEAR3(1)                                                                          <---------ALFIN1                                              <----------DOF2      ====================bZIP_DOF                                       <----------DOF2          ------>ZmHOX2a(1)                       *TSS            ================================================bZIP_DOF                    --------->ZAT14------>MYB46(1)            ----------->RAV1(2)    <------ZmHOX2a(1) -AHL20(2)          <---------ZAT14------>MYB83        ------>ZmHOX2a(1) <---------LBD16 --->ICU4   <---------AHL20(2)   --------->AtMYB61 --------->ANAC46<----------DOF2  ----------->GT1 ----YAB1  --------->AHL20(2) <---------ALFIN1=========================================bZIP_DOF   agtagagaaactattaaatcagtatagacccctcacctacgctttactctttcactcctctctctcctgctttgctccgccgtgagaggagaaacaaatg  25266100                          ------->GAMYB                         ----------->HVH21                     <------NtERF2                    <---------ATERF1(1)                    --------->RAP2.6(2)                    ------>NtERF2                    <---------RAP2.3(1)                   <---------DEAR3(1)                   <---------RAP2.6(2)                   --------->ATERF1(2)                   <---------ATERF1(2)                  <------NtERF2                  --------->ATERF1(1)                 <---------ATERF1(1)                 <---------RAP2.3(1)                <---------DEAR3(1)                --------->ALFIN1               --------->ATERF1(1)               <------NtERF2                                            --------->ZAT14              <---------ATERF1(1)                                       <---------ZAT14             <---------DEAR3(1)          -------->P           --------->ARR11(3)             <---------ANAC46          --------->MYB46(3)     <---------ARR11(3)             --------->ALFIN1          <---------MYB55(2)   ----------->ARR10   --------->ANAC46            <------NtERF2--------->MYB46(3)        ---------->DOF2    <---------ZAT14            <---------LBD16  ----------->GT1 --------->MYB52(1)    <---------At5g28300            --------->ATERF1(1)        <---------MYB111(2)<---------MYB52(1) --------->ZAT14           <---------RAP2.3(1)--------->At5g28300--------->At5g28300  --------->ZAT14      --------->ICU4          <---------DEAR3(1)<---------DEAR3(1)  ----------->GT1   <-----------GT1      <---------ZAT14    <-----------HVH21--------->ATERF1(1)------->GAMYB------------>MYB.PH3(1) --------->ARR14(2)   gggaattgtcaagcggcggaggcggcaacgacggtgatacaacaaccagacggtaaatcggttagattttactgtacagtaaacgcgagcgaagtgatta  25266200                 ------->MYC2                 <-------MYC4                 <-------MYC2                 <-------PIF5                 ------->MYC4                 ------->MYC3                 <-------MYC3                 ------->PIF5                <---------TGA1a                --------->O2                <---------O2                <---------bZIP60(2)                   <------NtERF2                --------->ANAC46                     ------>NtERF2                --------->PIF3(3)                    --------->ABI4(2)                <---------PIF3(3)                   <---------DEAR3(1)                --------->TGA1a            --------->SPL7        <-----------TGA1              <---------ALFIN1             ------->TEIL         --------->O2            <-----------------PIF3(1)     <---------ALFIN1      --------->bZIP60(2)           <---------WRKY38(1)           <---------SPL7         --------->ANAC46         <-----------HVH21              --------->DEAR3(1)     ------>NtERF2        --------->ANAC46              ------>NtERF2 --------->ALFIN1        --------->LBD16               --------->LBD16<---------MYB46(3)                        ------       --------->LBD16        ------>ZmHOX2a(1)--------->MYB52(1)<-----------HVH21            <------      <---------LBD16      ------>ZmHOX2a(1)  ----------->HVH21--------->LBD16          ---------->ID1  <---------ALFIN1--------->ALFIN1   ------------------>SPL14<---------LBD16---------->DOF2------>ZmHOX2a(1)   agtcccatcccggtcaccacgtggctctcctcctctcttccgccgtacctcacggtggctctctccgcgtcactcgtataaagcttcttcgtccttctga  25266300                                                          --------->YAB1                                                          <-----------GT1                                                  --------->AHL20(2)                                                  <---------AHL20(2)                                                  <---------ARR11(3)                                                  <---------AHL20(1)                                                  --------->AHL20(1)                  <---------YAB1              <---------AHL20(2)               <---------YAB1           ----------->GT1--------->YAB1                            ----               --------->ICU4        --------->LBD16   --------->WOX13(1)                       <---- --->YAB1   --------->WRKY18(1)   ------>ZmHOX2a(1)  <---------AHL20(2)                      <------- ---YAB1   <-----------HVH21 <---------At4g35610  --------->ARR11(3) --------->ANAC46   <---------AHL20(2)   taacctcttgctcggtcatgtttatagactcatctcctccgaaggtatataatatattaatcacaattcacacagaacatgtttcagttttaaattcagg  25266400                                                                          --------->ANAC46                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                               <----------DOF2     <---------YAB1         <---------- ------>DOF2                                 --------->At4g35610 --------->YAB1      <---------AHL20(2) --ZmHOX2a(1)>>>>>>>>>MYB98                  <---------At4g35610 <---------ICU4----------->GT1   ---- --LBD16 --------->TOE1(3)                <---------At4g35610   <---------ATHB12    --------->AHL20(2)   aaagaacagaaccctaacttatagggttttcttcaatttgtttcttctgcttcacgtttgattacaatcatcatatacgaagtgtataaaatttacaaat  25266500  Previous    Next  AGI:  At5g62900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G50090.1); similar to Os09g0381600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063061.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40951.1) Range:  from: 25266023    to: 25267168    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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