Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->ARR11(3)    <---------TOE2(3)                              ---------->DOF2      <-----------GT1                                  -   ----------->GT1       <---------YAB1  <---------ARR11(3)    <---------TOE1(3)                ----- ->MYB46(3)           --------->ICU4    <---------RVE1(1) <----------DOF2         <----------DOF2   <   aaactttgttaatagcaacttgtattgatgaataaagagaagagattttagttttactctctttttaggtttactatgtaaacactttgctatatatgaa  25249500                             <---------ARR14(2)                             --------->ARR14(2)                                <-----------RAV1(2)                          --------->ANAC58                                --------->ANAC46                          --------->ANAC58                                --------->ANAC58                     --------->ANAC58                                     --------->ANAC58       <-----------GT1 --------->TOE1(2)                              --------->ANAC58              - -------->ANAC55(2)  --------->ANAC46                                 --------->ANAC46           <--- -->TEIL   <----------DOF2--------->ANAC46                            --------->ANAC58     --------->ALFIN1 ---------ANAC55(2)  --------->ANAC58           --------->YAB1     --------->ZAT14        <----------   tcacttaatattcctttctcatcaagctacgaaactgcaaacgaattgaatcaagatgaagagaaacagaacacacaagcctcaggtttcagtgtgaggc  25249600                                                                 <---------MYB52(1)                                                               ----------->GT1                                                               <------MYB46(1)                                                               <---------DEAR3(2)                                                               <---------MYB46(3)                                                               <------MYB83                                                              <---------DEAR3(1)        ------>MYB46(1)                                                             <---------ORA47(1)         --------->MYB52(1)                                                           <------MYB83                 ------>MYB83                                                           <------MYB46(1)            <---------MYB59                                                   --------->AHL20(2)          ------>ZmHOX2a(2)                                                 <----------DOF2<-------GAMYB <------ZmHOX2a(2)                                   --------->TOE2(3)   <---------REM1(1)      --------->CCA1(2)  --------->WOX13(1)        <------------CBF    ===================================================== ----------->CBF   <---------AHL20(2)           --------------->AGL15        --------->AGP1 ----TEIL          --------->AHL20(2)           <---------------AGL15        --------->ARR11(3) -HVH21           --------->AHL20(2)   <---------TOE2(3)  --------->MYB59    <---------ARR11(3)     -   gcatcaatcgaaaatactaaattaatctctcattgtttcttaatgttttccctttaaatgtaggtcggttaagacttgagatctaaaacctaatgggaca  25249700                                                   --------->RVE1(1)                                             ----------->GT1                                         <---------ARR11(3)                                         --------->AHL20(1)                                         --------->ARR11(3)                                        ----------->TBP                     <-----------GT1  <---------------AGL15         --------->At4g35610          --------------->AGL15         <---------At4g35610    <------------CBF   --------->CCA1(1)      <---------At4g35610 <----------DOF2<---------AHL20(1) =====================================================MADS_MADS                        ----------->GT1 ------>TEIL  <---------At4g35610   ------------>CBF        <----------ID1     --------->LBD16   tgaaactgggctgcttagcttataaactcttttgtattgccaatatatagaaaatatccaaaaaaacaaatgtcataaacccccaaaaaatgtcaaaaac  25249800                                                                                           ------>ZmHOX2a(2)                                                                   ------>NtERF2          --------->GLK1(1)                                                                  --------->ANAC58        <------ZmHOX2a(2)                                                                  --------->ANAC46       <---------ARR14(2)                                                                  <----------ID1         --------->ARR11(3)                                                                  --------->RAP2.6(2)    --------->ARR14(2)                                                                  --------->ANAC58       <---------ARR11(3)                                                                 --------->SPL7    --------->AtMYB61    --------->AHL20(1)                                          =================================HOX2a_HOX2a    <---------AHL20(1)                         ----------->HVH21<------ZmHOX2a(1)--------->ARR11(3)   --------->AHL20(2)              --------->AHL20(2)           ==================================HOX2a_HOX2a --------->AHL20(2)              <---------TOE2(3)--------->bZIP60(1)            <---------ARR11(3)   caaaaatatatatgtgtttttcttcgttcaagtttaatgaaatagaaaactgacaccatgaagagaggacgccaagagaagaagacctcacgatctccaa  25249900                       <---------ARR11(3)                   --------->ANAC58            --------->TOE2(3)                                <----------DOF2            <-----------HVH21                           --------->ARR14(2)            <-----------TGA1 --------->LBD16            <---------ARR14(2)           --------->bZIP60(2)    ----------->GT1      <---------CCA1(2)        --------->ARR14(2) <-   ------>NtERF2   --------->ANAC58                    <---------GLK1(1) --------->MYB52(1)       <--   aacgacgacaacaacgtcagaacgaaatctccgagagagaaaattcaaacggtatacatatccctttcgatgtaataaccgatatactctcgagactccc  25250000                                              --------->TOE1(1)                                              --------->ANAC55(2)       <---------O2                           <---------ANAC55(2)       --------->O2              --------->ZAT2    <-----------GT1          <---------YAB1       --------->TGA1a           <---------ZAT2 <---------CCA1(2)           --------->ICU4       <---------TGA1a           --------->At4g35610             <---------YAB1 --------MYB52(1)                <---------At4g35610           <---------ICU4  <---------YAB1 ---------HVH21 <---------ARR14(2)   <---------AtMYB61         --------->YAB1<---------ICU4        --   tgttaagtcacttgtgaggttccaatgtgtatcgaagctgtggtcatctcgtatcaccctcttgatcatgactcggtcattattctcgccctctacttat  25250100                                                                                            <--------                                                                                            ---------                                                                                     <---------ICU4              --------->WOX13(1)          --------->AHL20(2)                         --------->ATHB51            <---------YAB1                --------->YAB1                             --------->AHL20(2)      --------->YAB1                     <---------YAB1                              <---------AHL20(1)     <---------ATHB12                --------->At5g28300                             <--------ATHB1    <---------TOE2(3)         ---------->DOF2  --------->TOE2(3)                     --------->YAB1   <---------ICU4   <---------ARR14(2)   --------->ICU4                             <---------ATHB51   --------->YAB1   --------->ARR14(2) --------->YAB1                               <---------ATHB12 ---->ZmHOX2a(1) --------->YAB1     ----------->GT1                         --------->ANAC55(2)<-----   cctactaatgatatatcattcatatacccagacaaagacagtaattatacattaaaccatgggcgaagttgggattttaagtatcaataattttcgagga  25250200          <------MYB83          <------MYB46(1)      <---------MYB46(3)                                      ----------->GT1      <-----------RAV1(1)                                <---------LBD16    <-------GAMYB                                       --------->MYB52(1)                          -   <-----------RAV1(1)     --------->YAB1              <-----------GT1 --------->ANAC46             < -HSFB2a(2)    --------->ANAC58                    --------->AHL20(2)  --------->ANAC58             < >HSFB2a(2)    --------->ANAC58                    <---------AHL20(2)  --------->ANAC58        <----- -ZmHOX2a(1)--------->WRKY18(1)          <------ZmHOX2a(1) --------->LBD16                  ---------   ctcttctgttgttggtcaagctcgatctataaacataccaataggaaaacgattttattaccggaggtaaaacacgatagatggagcaactcgtgtgatg  25250300        --------->CCA1(2)        --------->GLK1(1)       --------->ARR14(2)       <---------ARR14(2)                                                            --------->ANAC46 -------->KAN4(1)<---------At4g35610                                                 --------->ANAC58 ---------HSFB2a(1)                                    ---------->DOF2               --------->ANAC58 ---------MYB46(3)                             <------MYB83                 ----------->HVH21 ----WOX13(1) ------>ZmHOX2a(2)                <------MYB46(1)        --------->ATERF1(1) -->HVH21 <---------YAB1          <-----------GT1     <---------ATHB12<------ZmHOX2a(1)           <--   gattgttcggatatgatccagttgagaaacaagttttcacattagtgggaggtccaatgaagcagcaatggaggagccttgacatccaaggcatttggaa  25250400  Previous    Next  AGI:  At5g62860.1    Description:  F-box family protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G48020.1); similar to unknown [Populus trichocarpa] (GB:ABK95323.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 25249858    to: 25251793    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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