Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------AHL20(2)                                              <---------AHL20(2)           ----------->GT1                                         ----------->GT1                   <----------ID1    <-------                                        --------->ANAC58                 ---------->DOF2     <-------                  --------->ZAT14     ---------->DOF2         ---------->DOF2             <---------AHL20(2)        <---------ANAC46<----------DOF2 --------->ANAC58 --------------->AGL15            <----------  <---------YAB1  --------->ZAT18   <---------HSFB2a(2)  <---------------AGL15      <---------ARR11(3) --------YAB1 <-----------RAV1(1)   --------->HSFB2a(2) ----------------->AGL3      --------->ARR11(3) -------GLK1(2)   <---------ZAT18 <---------LBD16       ----------------->AGL2  ---------->DOF2 --->DOF2   <---------AtLEC2 <----------DOF2  --------->AHL20(2)   ---------->DOF2----------->GT1  <-   gattattgttgtttgaatggtgctctcttttctttcttcggaaaggaataaaatttatcccataaaaagaaaagaaaaagaaaaaagataatttacttta  25235500                                                               <---------ARR11(3)                                                               --------->ARR11(3)                                                              --------->GLK1(1)                                                         <-------TEIL                              --------->YAB1           --------->ARR14(2)                      <---------WOX13(1)               <---------ARR14(2)                <---------ARR11(3)                    --------->ATHB12             <---------LBD16                <---------ICU4 ---DOF2        <---------MYB52(1)              <---------ANAC58               <---------YAB1 --DAG2     <---------At4g35610                 <---------ANAC58       >>>>>>>>>GATA-1   --------->ARR11(3) -GT1<---------YAB1<---------YAB1               <---------ANAC46<------ZmHOX2a(2)  --------->YAB1 --------AHL20(2)  --------->ICU4         <---------ZAT6--------->CCA1(2)    --------->YAB1       <--   tttaagtgtgattaagctgttatgattgactatcacattacatagtgttttcgtggggatacagagatcaatagataaatgataatggtaagataatggt  25235600                                                                    ------->TEIL  <-------MYC3                                                                  <---------SPL7  ------->MYC3                                                                <---------------AtSPL3                                                              --------->ALFIN1   ====================                                                              <-----------RAV1(1)<---------O2            --------->At4g35610                   --------->At4g35610            <---------TGA1a            <---------At4g35610                   <---------At4g35610       ----------->HVH21          <--------P                              ----------->RAV1(2)  <---------MYB52(1)     <------------CBF                             ========================RAV    --------->O2  <------MYB46(1)                              ================HOX2a_HOX2a--------->ANAC55(2)  <------MYB83            <---------ATHB12     <------ZmHOX2a(2)<---------------AtSPL8 ---------RAV1(1)   ----------->GT1  <---------ZAT6     <------ZmHOX2a(1) <---------ANAC55(2)   -----   atgttggtattggtagatgagtcagtaaatcatttactactgctaatggatcatctgaggacaagtgttgtacgttaagtgacacatggcaaaacagtga  25235700                                                               <----------DOF2                                                               <---------DAG2                                                         --------->ANAC58                                                         --------->ANAC58                                --------->ANAC58         --------->ANAC46                   <---------ANAC58                      --------->AtLEC2                   <---------ANAC58                  --------->AtLEC2     --------->DOF5.7(2)        --------->ANAC46--------->bZIP60(2)                              <---   ----------->GT1--------->MYB52(2)            --------->ANAC58                  <---------GLK1(1) ======bZIP_DOF  <-----------GT1--------->ANAC58--------->ANAC46                  --------->GLK1(1) ----->DOF2   <---------ZAT6 --------->MYB46(3) --------->ANAC58     <----------DOF2     ------>NtERF2   aagagacgttaaacaagtgttacttgctgcatccactcaaattccatcccaagtcatgcatgcaactttttctttaaacatcggaaatcggagcctgaat  25235800                                     --------->ZAT14                                    --------->ALFIN1                                    <---------REM1(1)                                <---------At5g28300                               <-----------GT1                            <---------ICU4                                  --------->TOE2(3)                            <--------HAHB4                                  <---------DAG2                            --------->YAB1                                  --------->TOE1(3)                           <---------YAB1                                 <---------TOE1(3)          --------->MYB52(1)--------->ATHB51                  --------------->AGL15      <---------DOF5.7(2)  --------->ICU4                     <---------------AGL15    <---------MYB52(1)   --------->TOE1(3)              <---------YAB1   <---------DOF5.7(2)       <-    --------->DOF5.7(2)  --------->YAB1          ------------>CBF        <-----------GT1   <------ZmHOX2a(1) ------AHL20(2)          --------->TOE2(3)  <---------CCA1(2)----------------->AGL3      <---------ANAC46   taatgcgttaactaatggaaacaaaaaccataattacggtgtagccatctctccaattccgattccatttcaagttaaccttatcgatatggaggatagc  25235900                                                                                              -------                                                    --------->ANAC46                          <------                                                    --------->ANAC58                          -------                                            --------->LBD16                                   <------                    --------->TOE2(3)      --------->ANAC58                                   <------        --------->LBD16                    --------->ANAC46                                  <-------       --------->ANAC58                    --------->ANAC58                             <---------MYB46(3)       --------->ANAC58         --------->DAG2      --------->ANAC58                    --------->MYB111(2)       --------->ANAC46        ---------->DOF2 ---------->DOF2                 ------>ZmHOX2a(2)      --------->MYB46(3)   <----------ID1 --------->MYB46(3)                  <------ZmHOX2a(2)      <---------LBD16    ---------->DOF2  <---------LBD16                    <---------ARR14(2) ----------ARR10   --------->YAB1     ----------->HVH21--------->MYB52(1)    --------->ARR14(2) -----   aactctcacccgcaaaatcaaacatcaaaaagaaaaagctctcacccgcaaaagaagcaacgtatggagaatgaaacacgatcggctaagttgttggatc  25236000                                               <----------DOF2                                              <---------DAG2                                            -------->P -->ARR14(2)          <---------ANAC58      ------>MYB83                      --------->AHL20(2) ---AGP1<---------WRKY18(1)    --------->At4g35610 <---------TOE2(3)          <---------AHL20(2) -->ARR11(3)          <---------ANAC58      ------>MYB46(1)                   <---------AHL20(1) ---ARR14(2)      <---------MYB52(1)       ------>ZmHOX2a(1)          <---------ANAC58 ---ARR11(3)     <---------MYB52(1)       <---------MYB59<---------YAB1    ------->TEIL --CCA1(2)  <---------SPL7     <---------At4g35610 <---------TOE1(3)  <---------ANAC58       -------- ->ZmHOX2a(2) <---------LBD16 --------->DEAR3(1)  <-----------RAV1(2) <---------AtLEC2     --------->ANAC55(2)   ttgatgttcttgactgtccggtttgcttcgagccgctcactattcctacctttcaggttatgttttgaacttgcatgcattttattttgtttcatgtgac  25236100                                                         <---------ANAC46                                   <---------RAP2.6(2)   <------MYB46(1)                         --------->AHL20(1)              ----------->GT1                         --------->AHL20(2)              <------MYB83                         <---------AHL20(1)             --------->MYB46(2)                     --------->AHL20(2)         ------->TEIL                     <---------AHL20(2)        <---------CCA1(2)                    <---------AHL20(2)    --------->ATHB12          <---------ANAC58                    --------->AHL20(2)   <---------YAB1<---------MYB55(1)                    <---------AHL20(1) --------------------->WRI1   <---------ANAC58<---------WOX13(1) <---------YAB1     --------->AHL20(1) <----------DOF2<---------MYB52(1)         --------->ICU4 --->HVH21<----------DOF2<---------AHL20(2)>>>>>>>>>ARR2--------->MYB59          <---------YAB1   attttgatttcgcttttgttaatttattttattgaatacggctttgattgtatctcgtttggtatattatgcgtttcagtgtgatgatggacatatagtt  25236200               ---------->DOF2              --------------->AGL15              <---------------AGL15             ----------------->AG             ----------------->AGL1        <---------ANAC46              <---------HSFC1(2)         <----------DOF2                 ------>ZmHOX2a(1)               --------->HSFB2a(1)        <---------ANAC58         <---------ANAC46                        --------->HSFC1(2)        <---------ANAC58       --------->ZAT18              --------->YAB1   --------->ANAC58 <------   <---------ICU4              <---------ZAT18      <-----------GT1      <---------HSFB2a(1)  -------  --------->ICU4     ----------->GT1    <---------LBD16     ----------->GT1  --------->ANAC58 -------   tgcaatttttgctttgccaaagtgagtaacaagtgccctggtcctgggtgtgatttacccattggtaataagcgatgcttcgcaatggagagggttctcg  25236300                                                                         --------->ANAC58                                                                         --------->ANAC58                                                                    --------->ANAC58    <---------MYB111(1)                                           --------->DAG2           --------->O2   --------->ANAC58                                          ---------->DOF2           --------->ANAC58    --------->MYB46(3)            <---------ANAC58        <------NtERF2               <-----------HVH21  --------->ANAC58 ---HSFB2a(2)                       --------->ZAT18         --------->DAG2   --------->DAG2 -->HSFC1(1)<---------ANAC58        <---------ZAT14        ---------->DOF2  ---------->DOF2 -->HSFB2a(2)                       --------->At4g35610<---------YAB1    <---------ANAC55(2)   aatcagcctttgttccatgtcaaaatactgagtttggctgcacaaaaagtgtctcttatgaaaaagtgtcaagtcacgaaaaggaatgcaactactctca  25236400  Previous    Next  AGI:  At5g62800.1    Description:  seven in absentia (SINA) family protein. Identical to E3 ubiquitin-protein ligase SINA-like 11 [Arabidopsis Thaliana] (GB:Q9FM14); similar to seven in absentia (SINA) protein, putative [Arabidopsis thaliana] (TAIR:AT5G37890.1); similar to SIAH1 protein [Brassica napus var. napus] (GB:CAB89182.1); similar to SIAH1 protein [Brassica napus] (GB:CAC80703.1); contains InterPro domain Seven in absentia protein; (InterPro:IPR004162); contains InterPro domain SIAH-type (InterPro:IPR013323); contains InterPro domain TRAF-like (InterPro:IPR008974); contains InterPro domain Zinc finger, SIAH-type; (InterPro:IPR013010) Range:  from: 25235889    to: 25237193    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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