Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <----------DOF2                  <---------------AGL15                  --------------->AGL15                 <-----------------AGL1      <---------ARR11(3)         --------->ARR11(3)                  --------->ARR11(3)        <---------CCA1(2)                   <---------CCA1(2)      <---------AHL20(2)             <---------ZAT18                        <----------DOF2      --------->AHL20(2)             --------->ZAT18           <---------ANAC55(2)  <----------ID1 --------->ZAT18 <-----------------AG<---------ZAT14   --------->TOE1(2)    ------>ZmHOX2a(1) <---------ZAT14 <-----------------AGL3   <---------AHL20(2)   --------->ANAC55(2)  ----------->GT1 <---------ZAT18 <-----------------AGL2   --------->AHL20(2)  <-------TEIL --------->TOE2(3) --->DOF2<---------ARR11(3)    <------ZmHOX2a(1)<----------DOF2----------->GT1    ---------->DOF2   gagtgcatttatatcttcttctttttttggtaaggagagtgcatttatatctttatccctacgattcgtaactaaatcctttaaaaaagaaaaaaaaaac  25230200                           <---------MYB52(1)             <---------WOX13(1)                          <---------RAP2.6(3)           --------->ATHB12                          --------->LBD16  <---------ARR11(3)    --------------->AGL15                         --------------->AGL15         <---------YAB1                         <---------------AGL15       <---------ANAC58                         <---------ATERF1(2)    <---------AHL20(2)  <---------ATHB51                         ========================================================MADS_MADS                        <---------ANAC46   <---------AHL20(1)    <---------------AGL15                        <---------LBD16    --------->AHL20(1)   <-----------------AGL1                        ----------------->AGL1  --------->AHL20(2)  <---------ATHB12 ---------->DOF2                  <---------AHL20(2)       --------->ARR11(3)   <-----------------AGL3             --                  <---------YAB1      ----------->GT1<---------ANAC58--------->MYB52(1)     ---------       <---------AHL20(2)--------->ATERF1(2)--------->AHL20(2)  ----------------->AGL1    ---------->DOF2   taattgtttttaattcaagttttattgccggtattagaaacagaaaatatttatttcttgattgtttcaaataatggaaaccaaaaaaaaaggaaagaga  25230300                                                     <---------ANAC55(2)                          ---                                         <-----------GT1                                         <---            ----------->GT1           --------->GLK1(1)                              <---------ICU4           --------->DAG2         ----------->GT1  --------->AHL20(2)                --------->ATHB51          ---------->DOF2      ---------->DOF2  --------->WOX13(1)                  <---------YAB1<-- ------->ICU4 --------->AHL20(2)--------->DAG2------------>CBF           ----------->RAV1(1)    <---- -->GT1--------->YAB1 ---------->DOF2 <---------GLK1(1)                 <----------ID1     --------->DEAR3(1)   aattagtaatcaaaaagtaaatttgaaagaaaaaaaagggaaatcaccatcaattaagtaaacccatcgccagagcaacaaaaaccattatcgccctcgt  25230400                              <-------TEIL                             --------->CCA1(2)                                                     --            --------->HSFB2a(2)                                                                 <----        <---------GLK1(2)    --------->ARR14(1)                                        --------->ICU4 ------>HSFC1(2)            --------->ARR14(2)                      <------ZmHOX2a(1)  <---------ATHB12 ------TOE1(2)              --------->ARR11(1)                    <---------TOE2(3)------------>CBF<- -------HSFC1(2)            <---------ARR14(2)                  --------->ICU4---------->DOF2  ------ -----CCA1(2)       --------->At4g35610                    ----------->GT1--------->At4g35610  <-----   agcttcttcagtttctcgagtcatctctaagatacgacgtttcaagtctctcaacgatggaatgtaataaggaagaagctaaaagagcaatgactagtca  25230500 ------->ZAT14                                                                     ------->GAMYB --------CBF                                                                  --------->MYB46(3) --------ZAT14                      <------------CBF                  --------->GLK1(2) --->ATHB12                        --------->ATHB12   --------->TOE2(3)    <---------CCA1(2) ----ICU4   <----------DOF2  <------------CBF       <-------TEIL     <---------GLK1(2)    <---------MYB46(3)   ttgcagagagaaaactttctgagaacgattacattggtcattggtgcaaagaaattcattaacaaggctcagaatttgtatccaacgctcgatggtttga  25230600                                                             <---------ANAC46               <---------YAB1                             ----------->HVH21                         <            --------->ICU4                             --------->GLK1(2)                         ----            <---------YAB1                             --------->ARR14(2)                        <---          --------->YAB1                               <---------ARR14(2)                   <--------         <---------YAB1                                <-----------ARR10                    ---------         --------->ICU4                  ---------->DOF2--------->At4g35610             ------>ZmHOX2a(1)       --------->YAB1     <---------ARR11(3)          <---------GLK1(2)                 <----------DOF2    <----------DOF2       --------->ARR11(3)       <------ZmHOX2a(1)                  ------>ZmHOX2a(2)   --------->TOE2(3)     <---------CCA1(2)        ----------->GT1        --------->ATHB12<---------MYB52(1)   aacaacctttgatgatgatcaatgtttatatctctgcatcaaacaaagaagaaggagaatctgactggtatggaatccttggtgttgatcctttagctga  25230700                                                                                    ---------->DOF2                                                                                <---------ANAC58                                                                                <---------ANAC58                                                                                <---------ANAC46                                                                               <-------TEIL                                        <---------ANAC58                    <------MYB46(1)                                        <---------ANAC58                    --------->HSFC1(2)         --------->ZAT14             <---------MYB52(1)                     <---------HSFC1(2)         <---------ZAT14            <-------GAMYB    --------->ANAC58       <------MYB83 ---------YAB1             --------->TOE1(3)         --------->ANAC58       --------->HSFB2a(1) ----->ICU4                --------->TOE2(3)    --------->LBD16       <---------LBD16 ------YAB1              <---------ARR11(3)   <---------LBD16        <---------ANAC46  <---------At4g35610 -At4g35610              --------->ARR11(3)<---------ALFIN1       <-----------RAV1(1)  <---------ZAT2 >At4g35610     <---------ICU4     <-----------RAV1(1)     ----------->GT1  <---------HSFB2a(1)  <---   tgatgaaacagtgaagaaacattacaagaccttagctctgttgcttcacccggacaagaacaggtttaatggtgcggaaggtgcgtttaagctggtttta  25230800                                                                                       <---------ANAC58                                                                             --------->HSFC1(2)                                                                             --------->HSFB2a(1)                                                                             <---------HSFC1(2)                                              ---------->DOF2      ---------->DOF2     <---------ANAC58    <------MYB46(1)                     --------->WRKY38(1)     --------->ANAC58       <---------ANAC46    <------MYB83                      <-------GAMYB             --------->ANAC58   --------->At4g35610 <---------ANAC58                    <---------ANAC58    --------->AtMYB61   --------->MYB46(3) <---------ANAC58     --------->DAG2 <---------ANAC46    <---------------AGL15  ----------->RAV1(2) ------At4g35610     ---------->DOF2 <---------ANAC58  >>>>>>>>>MYB2      --------->ZAT18   gatgcttggtctctactatctgataaagctaagagaattgcgttgatcaaaagagaaaaccaaaacaagaaaagagcgaaccatctgcttcgtgtaataa  25230900                                              <----------DOF2                                             <---------DAG2     --------->ARR14(2)                    <---------ARR11(3)          --------->ETT(2)     <---------ARR14(2)                  ----------->HVH21         <----------DOF2 --------->ZAT14                    <---------ETT(2)            <---------ARR11(3) <---------ZAT14   <<<<<<<<<TBF1    <---------ZAT18            <---------WRKY18(1)       --------->ZAT18 --------->At4g35610               --------->ALFIN1         <---------AtLEC2         <---------ICU4<- <---------ZAT2 <<<<<<<<<TBF1--------->ARR14(2)          <---------ZAT18            --------->ICU4 -- <---------At4g35610         <---------ARR14(2)   --------->ETT(2)<---------DAG2    <---------ATHB12   gcctgcagagcctgcttcttcttcttcgtcgaaaccggtggacatgaccttttcgacagtgagcatgaccttttcgacagtatgcaataaatgcacaacg  25231000                                                                                 <---------ARR11(3)                                           <---------ANAC58                      <---------AHL20(1)                --------->ANAC46           <---------ANAC58                      --------->AHL20(1)           <-----------GT1          --------->ARR11(3)                   ----------->HVH21 --------ARR11(3)                   <---------ARR11(3)          --------->ARR14(2)                  < ------->ARR11(3)       --------->YAB1 <----------DOF2          <---------ARR14(2)      --------->ETT(2)   agatgttgtcatttttcgacgcagaatcatcttaacaagacctttccttgtccaaactgtggtcagaattcggctatgaccaatatatcatcgacagagg  25231100  Previous    Next  AGI:  At5g62780.1    Description:  DNAJ heat shock N-terminal domain-containing protein. similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G19580.1); similar to 80C09_4 [Brassica rapa subsp. pekinensis] (GB:AAZ41815.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609) Range:  from: 25230612    to: 25231363    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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