Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->At4g35610                <-------TEIL               --------->ARR14(1)                                       <---------YAB1               --------->CCA1(2)                                     --------------->AGL15              <---------ARR11(3)                         <---------AHL20(1)              --------->ARR11(1)                         --------->ARR11(3)              <---------GLK1(2)                          --------->AHL20(1)              <---------ARR14(2)                         --------->AHL20(2)            ----------->ARR10                <---------YAB1          <---------------AGL15  <---------ARR11(3)                 ----------->RAV1(1) <---------AHL20(2)  --------->ARR11(3)               <---------At4g35610   <---------ARR11(3)       --------->AHL20(2) ------->DOF2 --------->ARR14(2)   --------->At4g35610  --------->AHL20(2)        <---------AHL20(2)   caaagacctataccaagatacgctgaaaataacattcagcagcatttgttattgacaaatatattagttaacttattgtagtatataatttgtgtatttg  25220900                  <-------TEIL               <---------MYB46(3)              --------->ALFIN1              <---------AtMYB61              <---------DEAR3(1)            <---------MYB46(3)           --------->ALFIN1           <---------AtMYB61         <------MYB46(1)         <------MYB83        --------->MYB111(1)        <---------MYB46(3)        <---------AtMYB61        --------->MYB55(2)        --------->MYB111(2)      <-------GAMYB ------->TEIL     <---------MYB46(3)     --------->MYB111(1)     --------->MYB46(2)       <---------At4g35610           <---------YAB1                          <     --------->MYB52(2)       --------->At4g35610     <---------At4g35610                           <     --------->MYB111(2)     ----------->RAV1(1)      --------->At4g35610                      ------   <---------MYB52(1)      <---------ZAT14    <---------ANAC58                         <----------DOF2  ------------>MYB.PH3(2)  --------->ZAT14    <---------ANAC58                     <----------DOF2  <   aattagttagttggtggtggtgcatctactgcagcagtactaggcttagcttgttcagcatcatgaataagcttcacaatctcatctttctttaagacca  25221000                                                         <---------CCA1(2)                                                    <----------DOF2                                                   ------>ZmHOX2a(2)        <----------DOF2                          <---------ARR11(3)     ------->TEIL                                --------->ARR11(3)    <---------CCA1(2)                            --------->ARR14(2) ---------ANAC46               --------->REM1(1) <---------ARR14(2)                       <---------CCA1(2) ---------ANAC58              <-------TEIL       <---------AGP1                      <----------DOF2 --->AtMYB61         --------->At4g35610        <---------CCA1(2)                ---------->ID1 ---------ANAC58     ----------->RAV1(2)     <---------LBD16                <----------DOF2   tagcttgaatcttttcttcaatcttctgaagcttcatcttcaacttctctggatctttcttatcttcagggttcttctctttcttcgctttcttatcttt  25221100                                                <-----------GT1                                               <-----------GT1                    ------>ZmHOX2a(2)         <---------YAB1                      ------>ZmHOX2a(1)                    =======================HOX2a_HOX2a                     <----------DOF2                  <---------ARR11(3)  <---------ALFIN1                 <---------CCA1(2)                  --------->ARR11(3)------>ZmHOX2a(1)              ------>ZmHOX2a(1)  <<<<<<<<<TBF1   <------------------------ANAC81 --------->ANAC46    ------>ZmHOX2a(1) <---------YAB1       ------>ZmHOX2a(1)   cttcttgctcttcttctcttgatcttccccttcttctcctccaccatttttatcgtcctcgttcttatccttcttatctttatccttcttcttctccttc  25221200                                <----------DOF2     <----------DOF2 <---------ANAC58   --------->YAB1   <---------ZAT2    <---------ANAC58  <---------YAB1<----------DOF2   <---------At4g35610          --------------------->WRI1                     <----------DOF2   --------->At4g35610     ------>ZmHOX2a(1)         <---------DAG2         <---------YAB1   --------->ZAT2   --------------->AtSPL8<---------YAB1                  <---------ICU4   ttctcagctttctcagccttgttgtgttcctcttctttgttatcatggttcttcactttctcttctgtttctcccattattctttatgagtttgattttg  25221300                                                                                       <-------------                                                                                       ==============                                                                                      <---------At4g35610                                                                                 ------>ZmHOX2a(2)                                                                               <---------ARR14(2)                                                                               --------->ARR14(3)                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                               --------->HSFB2a(2)             <-----------ARR10                                           <---------ANAC46      <----------DOF2<------ZmHOX2a(2)                                           *TSS<---------HSFB2a(2) --------->AHL20(2) --------->At4g35610                                    --------->ANAC55(2)  <---------ICU4        <---------ARR14(3)                     <---------HSFB2a(2)   <---------ANAC58  <-----------GT1   --------->ARR14(2)                     --------->HSFB2a(2)   <---------ANAC58 <-----------GT1   <------ZmHOX2a(1)   tttttcttagatagtgcttaaatctagaaaactttcttacatatttcttgtagaactcagaattacccttttattacaaaggatcttcagctaattttgg  25221400                                                             <---------ANAC58            <---------YAB1                                                             <---------ANAC46            <---------AHL20(2)                                                             <---------ANAC58           <---------AHL20(2)                          <---------ANAC55(1)           <-----------RAV1(1)             --------->AHL20(2)      <---------ICU4      <---------ANAC58             <---------TOE2(2)       <----------DOF2      --------->YAB1      <---------ANAC46          <---------ANAC46        --------->ARR11(3) <-----     --------->ICU4       <---------ANAC58          <---------ANAC58       --------------->AGL15 --------->AHL20(2)     <---------AHL20(2)          <---------ANAC58       <---------------AGL15<---- ----AGL3       --------->LBD16          --------->ICU4<---------TOE1(2)<-----------GT1--------->YAB1 ==========================================================================================MADS_MADS   acataaaatgatcacatccgtagaaattacttgtataacgagaattatggagtttcgtatgttgcttccatattttactatctttagaattttaattctg  25221500                                                                                                <----                                                                                                <----                                                                                                <----                                                                                            ------>ZmHOX2a(2)                                                                                          --------->AGP1                                                                                          <---------AGP1         <---------ATHB12                                                                 <---------ARR11(3)       --------->WOX13(1)                           <---------YAB1                  <---------MYB46(3)   --------->YAB1                                --------->ICU4               <<<<<<<<<<<<<<<<<LFY<--  --------->ICU4                            <------MYB46(1)             --------->HSFB2a(1)<------ZmHOX2a(2) <---------KAN4(2)         ---------->DOF2  <------MYB83               <---------TOE1(2)  --------->ARR11(3) ----ANAC46      <---------At4g35610    --------->MYB111(1)            <---------TOE2(2) <---------CCA1(2) -----LBD16   ---------->DOF2           --------->MYB111(2)            <---------TOE2(3)----------->ARR10   tggaatgatcaatcgtttaagctcatccatagagcccctaagtagttggtaattgttatacatatataagacgaaggttttcacaatggttagatcttaa  25221600        <---------YAB1                                                  <---------ANAC46     <---------YAB1      --------->AHL20(2)     <----------DOF2   --------->ZAT2   --------->ZAT6     --------->WOX13(1)    ==========================HOX2a_HOX2a  <---------YAB1    <------ZmHOX2a(2)       <------ZmHOX2a(1)     --------->At4g35610 -----TOE2(3)       ===============================HOX2a_HOX2a    <---------ZAT2 -----YAB1   <---------ZAT14            ---------->DOF2        <------ZmHOX2a(2) -----TOE1(3)--------->ZAT14  --------->TOE2(2)<---------DAG2 --------->ARR14(2)        --------->AHL20(2) -------GLK1(2) <---------At4g35610 ----------->GT1           <---------ARR14(2)        <---------AHL20(2)   gattatcactataactgcagcgatcaattaaacctatgtagtaaaaggaccttttggttatacagatcagcttggcgaagaaaatagcatttaaattcaa  25221700                                                                                        ------>ZmHOX2a(1)               <---------ICU4         --------->AHL20(2)                               --------->TOE2(3)              <---------YAB1        --------->ICU4                               <---------ANAC58         --------->CCA1(2)   --------->AHL20(2)<-------TEIL--------->YAB1        <---------ANAC58 --- --------->AHL20(2)          --------->YAB1   --------->AtLEC2             <-----------GT1   <------- <---------AHL20(2)   ------>ZmHOX2a(1)<---------YAB1     --------->AHL20(2)     --------->ANAC55(2)   aaatttataagatttgattatttcctccaaataatatcaatattatacatgcatacacaaataaaaattggaagaattcacttacttatcctttgtaacg  25221800  Previous    Next  AGI:  At5g62750.1    Description:  unknown protein Range:  from: 25220675    to: 25221343    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g62760.1    Description:  nuclear protein ZAP-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO62513.1); contains domain no description (G3DSA:3.40.50.300); contains domain YLP MOTIF CONTAINING PROTEIN (NUCLEAR PROTEIN ZAP) (PTHR13413); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) Range:  from: 25221698    to: 25226734    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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