Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------AHL20(2)                   <---------AHL20(2)                                   --------->ICU4                       --------->AHL20(2)                             <---------TOE2(3)                          <---------AHL20(2)                        <----------DOF2   <-----------RAV1(1)     --------->HSFB2a(2)      <---------ZAT6              --------->ANAC58     --------->AHL20(2)             <---------HSFB2a(2)      ---------- --------HSFB2a(2)   <-----------GT1<---------ICU4             <----------DOF2     ----------->RAV1(1) ------->HSFB2a(2)   <---------AHL20(2)  <---------YAB1        <---------DAG2     --------->ANAC58 --GT1        --------->ANAC58----------->GT1               <-----------GT1       --------->ANAC58   tcgagataaaacagataagaaatttacttttgatgtaataaatattgttgctacgaagtattttacttttggaaataaatagggacgacattagtgttaa  25204100                                                                                          --------->O2                                       ------>ZmHOX2a(2)                                  ===========                                      <---------GLK1(1)                    <---------ANAC58                                      --------->GLK1(1)                    <---------ANAC58                                      <------ZmHOX2a(2)                    ----------->GT1<---------ANAC58                                     --------->ARR14(2)                    --------->ANAC55(2)                                     --------->ARR11(3)         --------->ANAC58          <---------ANAC58                                     <---------ARR14(2)         <----------ID1            --------->TGA1a                                <-----------GT1   ----------->GT1          <---------ANAC55(2)                 <---------At4g35610 <---------ARR11(3)         --------->ANAC58 ===================bZIP_DOF   ----------->GT1           <---------YAB1     ---------->DOF2 --------->ANAC46 <----------DOF2 ->GT1           --------->At4g35610 <---------AGP1 --------->AHL20(2)     <---------ANAC46   tactcttgtaaattttgtcagattacacattattttacagatctctcagacaaagtaaatacaaaaacgacacagtttcgtaactttcactcgcgtctca  25204200                                    ------->MYC2                                    <-------MYC2                                    ------->MYC3                                    <-------MYC3                                    ------->MYC4                                    <-------MYC4                                   <---------O2                                   <---------ANAC55(2)                                   --------->TGA1a                                   <---------ANAC46                                   <---------TGA1a                                   --------->O2                            =================bZIP_DOF                    <---------DAG2 --------->ANAC55(2)              --------->ARR11(3)                    =========================bZIP_DOF               <---------ARR11(3)                    <----------DOF2<--------ABF1        --------->MYB52(1)             <-----------GT1---------->DOF2        --------->AHL20(2)         --------->TOE2(3)<----- ==============================bZIP_DOF          <---------ANAC46 ----------->ARR10   <---------ANAC46   agtacaatctctaaattactcgctttctgtgaaagacacgtgtattttgtgacttaaataacagcgagtagattttagaaccatagtcgcgagtgttttt  25204300                   <---------ICU4          <---------AHL20(2)         --------->AHL20(1)         --------->ARR11(3)          <-----------HVH21                                      ---------         <---------AHL20(1)     --------->MYB52(1)          ----------->RAV1(1) <---------GLK1(2)        --------->CCA1(2)    --------->ANAC58             <---------ZAT14       --------->ARR14(2)       --------->ARR11(3)    --------->ANAC58             --------->ZAT14       <---------ARR14(2)       <---------ARR11(3)    --------->ANAC46          ------>ZmHOX2a(1)        --------->ARR11(3)<-- ----YAB1<---------ARR11(3) ------>ZmHOX2a(1)          --------->At4g35610  <-------TEIL   --------->MYB46(3)   ataggcacagatatatttgaattatgtctcctcgcaacgggtcgctctctctctctcctctgcaccagtctccaagggtacagattttgaaaaaccactc  25204400                                                            ---------->DOF2                                                           <---------AHL20(2)                                                       --------->AHL20(2)                                                       <---------AHL20(2)                        <---                                   --------->YAB1   ----------->GT1                          <-------                           ------------------------>ANAC81 --------->AHL20(2)                <-------                      <----------ID1                --------->YAB1                       ---------->DOF2                      ----------->GT1              <---------YAB1           <------ZmHOX2a(1)-------- >AtMYB61            ----------->GT1           --------->AHL20(2)         <---------TOE2(3)--------->ICU4 --------DOF2---------->DOF2     --------->AHL20(2)----------->GT1   <----------DOF2---------->DOF2--   ctttcacttagctcgaaaagaagagggaaaaacaaaataataaaaccaaaaaaatgataaattaaagaattctttttaggaaaaacaaaagtaaagattt  25204500                                                  -------->P                                                 <-----------GT1    <---------YAB1                        <---------ICU4                      --------------->AGL15  <---------ICU4                          --------->ZAT6                     <-----------------AGL3  --------->YAB1                          --------->YAB1                  <---------ZAT18 --------->ICU4                        --------->WOX13(1)               <------MYB46(1)         <---- --------GT1                  <-----------HVH21<---------MYB52(2)       <------MYB83            ----- --ARR11(3)                  *TSS   --------->ANAC58                   --------->MYB59         ------ --GLK1(2)                 --------->SPL7<---------ATHB12       <---------HSFB2a(2)            ------ ->ARR11(3)      ------>ZmHOX2a(1)  --------->ANAC46            --------->HSFB2a(2)      ----------->GT1 ------->YAB1 ------>ZmHOX2a(1)     --------->ANAC58            <-----------------AGL1 <-------GAMYB   ttcatcatgagtcttcctcctcttactcatacggtcatacccaatcactactaacctctctccattctcgaattaggtcactctatttgggttgaaaaaa  25204600                                   <----------DOF2                             <----------DOF2                            <---------HSFB2a(1)                   --------->ARR14(2)                            --------->HSFB2a(1)                   <---------ARR14(2)                            <---------HSFC1(2)                   <---------GLK1(1)      <-----------GT1     <---------ARR11(3)                     <---------CCA1(2) -----ARR11(3)            --------->ARR11(3)             --------->ZAT14 ---->ARR11(3)      --------->TOE1(3)     <XXXXXXXXXXXXXXXXXXXXMIR4227                              < --->CCA1(1)        --------->TOE2(3) --------->HSFB2a(2)<---------ZAT14                           -- --->RVE1(1)<----------DOF2 --------->HSFC1(2)        ----------->GT1--------->HSFB2a(2)           <-   tctcatattttcgtctttggaaccttaagaactttctcttttggaatcggtggaatcagtgaaatgggtatctcgaattgggttttctctgtaatttctg  25204700                                                                                       <------MYB46(1)                                                                                      --------->MYB111(2)                                                                                      --------->MYB46(2)                                                                                      --------->MYB111(1)                                                                                      <---------DEAR3(1)                                                                                      <---------MYB46(3)                                                                                      <---------AtMYB61                                                                                      --------->MYB55(2)                                                                                     <--------P                                                                     --------->ARR11(3)<---------MYB46(3)                 ------>ZmHOX2a(1)                              --------->YAB1      <-------GAMYB               ----------->RAV1(2)                         --------->ZAT14         <---------MYB46(3)      <---------DAG2                                      <----------DOF2    <---------DAG2      <----------DOF2                                     <---------DAG2     <----------DOF2  -------->P   <---------At4g35610                      ------>MYB46(1)     <---------ANAC58  ------- ---------MYB111(1)                        <--------P   ------>MYB83 <---------ARR11(3)<------MYB83 ------->At4g35610     <----------DOF2    <-------GAMYB<---------ALFIN1<---------ICU4<---------MYB55(1) --------At4g35610<---------At4g35610    <---------MYB46(3)<---------ZAT14  <---------ANAC58  <------   tagctaccctttttgtctcctgctcctttgctctcactcttgatggttagtcaaaacccactttactcataaatctttgcttttttggttggtgagaaat  25204800                                                               <---------GLK1(1)                                                             <------ZmHOX2a(1)                                                           --------->ANAC46                                                         <---------TOE1(1)                   <---------ARR14(2)                    <---------TOE2(1)                   --------->ARR14(2)                  --------->CCA1(2)         <---------YAB1                               --------->ARR11(1)        <---------TOE2(3)                            --------->YAB1   --------->GLK1(2)     <----------DOF2             -------->HAHB4                      <---------At4g35610  --------->ARR11(3)<---------GLK1(1)               <---------YAB1                     <-----------RAV1(2)  <---------ARR11(3)--------->GLK1(1)              <---------TOE2(3)                  <-------TEIL -->GLK1(1)       <------ZmHOX2a(1)              <---------AHL20(2)                  --------->CCA1(2) ---GLK1(1)     <---------TOE1(2)               --------->AHL20(2)       <---------ZAT14 --------->At4g35610   ctgagattttgatgtttgtaggatttgctctattggaattgaagagtggatttaatgatacgaggaactcactagagaactggaaagattcagatgagtc  25204900                              ------>ZmHOX2a(1)                             --------->TOE2(3)                                            <---------ATHB12                      ------>ZmHOX2a(1)                                          --------->DAG2                    ----------->RAV1(2)                                         ---------->DOF2    <-   tccttgttcttggactggtgtctcctgtaatcctcaagaccaaagagttgtttctatgtaaaaatatgctcttcttcgttgataaagtctcaatctttcg  25205000  Previous    Next  AGI:  At5g62710.1    Description:  leucine-rich repeat family protein / protein kinase family protein. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G35620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62495.1); similar to unknown [Populus trichocarpa] (GB:ABK93925.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66563.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine-rich repeat, N Range:  from: 25204529    to: 25207826    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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