Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->KAN4(1)                                                                  <---------KAN4(2) ------>AHL20(2)                                              --------->YAB1 -------AHL20(2)                                           --------->YAB1 -->AHL20(2)                            ---------->DOF2 <---------------AGL15 ---AHL20(2)                   <---------ICU4           --------------->AGL15 -------------ANAC81      --------->ZAT18              ----------------->AGL3     --------->ARR11(3)   tttaatgctcttcaacaaaatatcaatatgcactaattccactaaagaagattgcatactaaaataagaacattcaaataggctgatattgtattttcat  25159100                                                                        <---------AHL20(2)                                                                       --------->AHL20(2)                                                                <-----------GT1                                                                <---------AHL20(2)                                                           <---------YAB1  --------->YAB1                                                           <---------AHL20(2)     <---------TOE2(3)              <-----------GT1        --------->AHL20(2) <----------DOF2             ----------->GT1            ------->TEIL  <---------YAB1   atactttaagaaaatgaagccagagattacaatgttattaactgagttttagttcatgtatattattaacttattaaaaataaaactcatatatatgtgt  25159200                                                                     <---------WOX13(1)                                                                    <------------CBF                                                                   --------->ATHB12                                                              --------->AHL20(2)                                                              <---------AHL20(2)                                                             <---------AHL20(1)                                                  ----------->GT1 <---------AHL20(2)                                          <---------ICU4     --------->AHL20(2)                                      <---------YAB1         <---------AHL20(2)                                     <---------AHL20(2)   --------->AHL20(2)                                     --------->AHL20(2)   <---------AHL20(2)                                  <---------AHL20(2)      --------->AHL20(1)                      <---------REM1(2)--------->YAB1    <---------ATHB51             --------->GLK1(1)    --------->AHL20(2)     --------->AHL20(2)             <---------GLK1(1)    --------->YAB1 --------->DAG2  <---------WOX13(1)   <---------DAG2      <---------AHL20(2)       --------->YAB1   ---------->DOF2 <------------CBF      <----------DOF2    --------->TOE2(3) --------->ZAT14--------->AHL20(1)  --------->ICU4          <----------DOF2    <----------DOF2   <---------ZAT14<---------AHL20(1)  <---------AHL20(2)  ------->TEIL   <--------   aatcttctttaatggaattctatctacactgtataataatataatacttataaagtgaaataatttaattgattggatgaatgctttactttatttatct  25159300                                                             <---------AHL20(2)                                                            --------->AHL20(1)                                                           <---------AHL20(2)                                                         --------->AHL20(2)                                                         <-----------TBP                                                       <---------AHL20(2)                                                       ----------->TBP                                                       --------->AHL20(2)                                                     ----------->TBP                                                     <---------AHL20(2)                   --------->ZAT6                  --------->AHL20(2)                  ------------>CBF                 ----------->TBP              ------>ZmHOX2a(1)                    <---------AHL20(2)              <----------DOF2                    ----------->TBP             --------->TOE2(3)                   --------->AHL20(2)          <---------ARR14(2)                     <---------AHL20(2)          --------->ARR14(2)                   ----------->TBP                                 <-----         --------->GLK1(1)                     --------->AHL20(2)                             <------         <---------GLK1(1)                   ----------->TBP<---------AHL20(1)            --------->TOE2(3)    ------>ZmHOX2a(1)                       ------->TEIL <---------AHL20(2)              --------->At4g35610  --------->YAB1 <-----------GT1   --------->TOE2(3) --------->AHL20(2)              --------->ARR11(3) ---GT1  <---------CCA1(2)   --------->TOE2(3) <---------AHL20(2)                   --------->RVE1(1)   tctatcctaacatatcctttaacaatacatttcttaatcttatatgtatatatatatatatatatatttgtatgttttttggaaaaatatcacctcaaat  25159400                                                         <---------ANAC58                                               <---------ANAC58                                         --------->AHL20(2)                    <-----------GT1      --------->AHL20(1)                   <---------GLK1(1)--------->AHL20(2)   <---------ANAC58       <---------ICU4               --------->AHL20(1)<-------MYC3          <---------ARR14(2)       <--------ATHB1      <---------HSFB2a(2) <---------ANAC46         <-------TEIL       <---------AHL20(2)  --------->HSFB2a(2) <---------ANAC58  --------->AHL20(2)       --------->AHL20(2)  --------------->AGL15      ------->MYC3 <---------AHL20(2)       --------->ATHB51 ------>ZmHOX2a(1)<---------AHL20(2)      <---------AHL20(2)      --------->ICU4--------->ARR14(2)  --------->AHL20(2)       ----------->TBP --------->ANAC55(2)<---------ARR11(3)  <---------AHL20(2)     ----------->TBP <---------ANAC55(2)<---------ARR14(2) <---------AHL20(1)<---------ANAC46   --------->ARR14(2) ------ARR10       <---------CCA1(2)<---------AHL20(2)------->MYC2 --------->AHL20(2)         ------- ---CCA1(2)       ------->TEIL --------->AHL20(2)     <-------MYC2 ----------->TBP          <<<<<<<<<RAP2.2   cttacttaataatttgtatgtatatccttccaaaaaaataaaataatttgtgtgcatatgcgtgtatatatatatacatatactcccagcatttagatat  25159500                                                                  <---------ANAC58                      --------->ICU4                   --------->DAG2                   ------------>CBF                   ---------->DOF2          <---------AHL20(2)                      --------->HSFB2a(2)          <---------YAB1                         ----------->GT1  <---------ANAC58   <----------DOF2 -->CCA1(2)   --------->YAB1       ----------->GT1<---------HSFB2a(2)       <-----------RAV1(1)   gtgtgaatttgtataattagaatcaatattagcaaaatggagaaaactgtatcgagaaaagtagttgttcttgccattttgttgtctctttcatgtaagt  25159600                                            <---------AHL20(2)                       --------->YAB1      --------->AHL20(2)                --------->YAB1    <---------ICU4             <----------DOF2   --------->YAB1                                                     <--         <---------CCA1(2)    <---------YAB1--------->AHL20(2)             <---------YAB1         <-- --------->ETT(2)     <---------ATHB12 <---------YAB1                ------>NtERF2      --------->ATHB12   atgtctacggtctatcttttataaatcatgttttcataattttcatttatttcttacatgaaaattgatgccgagttttgatttttagtttgatttgaat  25159700     <---------HSFB2a(2)     ------>ZmHOX2a(1)                                      <---------ICU4     --------->HSFB2a(2)                     <---------DAG2 --------->ATHB12   <---------ANAC46         --------->AHL20(1)             <---------YAB1--------->ARR11(3) -------ANAC58              <---------ARR11(3)      --------->YAB1       <---------ARR11(3) -------ANAC58         ----------->GT1       <----------DOF2-------->ATHB1      <------ZmHOX2a(1)   tcgtgtcctagacatactagttatatagtatatattagaacatcacactttttatcaaaaaatcattggttttaaaatcttaggactaatctagctaatt  25159800                                                --------------->AtSPL3                                      ------>ZmHOX2a(2)                                      ================================HOX2a_HOX2a                                     <------ZmHOX2a(2)                                     =================================HOX2a_HOX2a                                    <---------AGP1<---------SPL7                                    <---------ARR14(2)                                    --------->ARR14(2)             <---------AHL20(2)     --------->ARR11(3)                                   --------->AHL20(2)    <-----------GT1 <-----------GT1 <---------ARR11(3)                        --------->YAB1    ----- --------->YAB1  --------->YAB1    <---------CCA1(2)           <------ZmHOX2a(1) <-----------GT1<----   ctaaaataactcgatttttttataactcgactaatctagatctcgttgcagtcgtactagtctcaggactaatctagctaaaataactcgattaaatcct  25159900                  <---------AHL20(2)                  --------->AHL20(2)          ----------->GT1         --------->ANAC58         --------->ANAC58        --------->SPL7      <---------SPL7    --------------->AtSPL3                                                                          <    --------------->AtSPL8--------->ZAT18                                                         <--   <---------At5g28300    <---------ZAT18            --------->ANAC58                            ----  <-----------GT1 --------->AHL20(1)               ---------->DOF2  ----------->GT1            <----- ->ZmHOX2a(1)    --------->AHL20(2)       <---------ANAC46 ---------->DOF2                     ------ ------DOF2      <---------AHL20(2)<---------TOE2(3) --------->ANAC58                    --------->MYB52(1)   ttgattaccgtacgctaaattaaattagtgcatcatataggtttgtgtatagcaaaagcatcaaagggagaagaaaaaactagtggagaactaagagatg  25160000  Previous    Next  AGI:  At5g62627.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65352.1); contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 25159537    to: 25160128    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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