Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------HSFB2a(2)                                           --------->HSFB2a(2)                                         <---------ZAT2                                         --------->ZAT2                                         <---------At4g35610                                         --------->At4g35610                                      --------->At4g35610                                      <---------At4g35610                --------->ARR11(3)    <---------ZAT2                <---------ARR11(3)   <-----------RAV1(1)           --------->ZAT18  <---------ICU4<---------ANAC46             --------->TOE2(3)  --------->DAG2<-----------ARR10 --------->ZAT6         <----------DOF2------>ZmHOX2a(1)        <--- ----DOF2 ----------->GT1  --------->AHL20(2)     <-----------GT1  --------->YAB1 <---------CCA1(2)   tcaaaaattgaagtgcaaaatctcaccaattcattaccactgctgctggaagaaaccatctttgaagaatcatcctcagagttcaaatctctagtctttc  25151600                                                   <---------TGA1a                                                   <---------O2                                                   --------->TGA1a                                                   --------->O2                                                   ===============bZIP_DOF                                                --------->ARR14(2)                                                <---------ARR14(2)                                               <------NtERF2                                              --------->LBD16                 --------->MYB59             <------NtERF2          --------->KAN4(1)               <---------MYB52(1)            <---------ANAC46       <---------HSFB2a(1)               <<<<<<<<<MYB2                ------>NtERF2          <---------KAN4(2)           <---------ZAT2                   --------->At4g35610  <------NtERF2           <---------At4g35610              --------->LBD16     --------->LBD16           <------NtERF2                 --------->At4g35610    <---------RAP2.6(3)          ----------->RAV1(1)            <---------At4g35610   --------->ETT(1)         <---------ATERF1(2)             --------->ZAT2  --------->ATHB12         --------->ATERF1(2)         --------->TOE2(3)   <---------ICU4       --------->ZAT2========================HOX2a_HOX2a--------->ICU4      --------->ANAC58           <---------GLK1(2) ===============bZIP_DOF      --------->ANAC46  --------->WRKY38(1)--------->DEAR3(1)  --------->LBD16                -------      --------->ANAC58  ----------->HVH21<---------ZAT2 <---------YAB1                      <--------    --------->LBD16  ------>ZmHOX2a(2)------>ZmHOX2a(1)<----------DOF2                   ----------->HVH21 --------GT1   <<<<<<<<<MYB1 <---------ZAT14<---------LBD16   <---------LBD16     ---------->DOF2   -   tacttccccagccagcagttagatcggtgactgtagattcctcagccgcggagacgtctttattgccggaatgttcagagcgagtaaagactcgaccgga  25151700                                <---------ANAC46                               <------NtERF2                              ------>NtERF2                             <---------DEAR3(1)                             <---------ANAC46       <---------ARR14(2)                            <--                             --------->DEAR3(1)     --------->ARR14(2)                           <---    --------->At4g35610  --------->SPL7            <---------CCA1(2)                 --------->At4g35610 -->LBD16               --------->MYB52(1)    <----------ID1     <---------ZAT6   <---------At4g35610 -LBD16 --------->MYB52(1)  <---------------------WRI1 <---------LBD16       <------ZmHOX2a(1)<------ZmHOX2a(1) -------->MYB52(1)     <---------SPL7      ---------->DOF2       ----------->GT1  --------->At4g35610   gttaacagctaaacggagaccagagcgaacggcgtcgtttacagggaaaggccaaatctcggagagagtgtaagaagaaggattagctgcagagaaggag  25151800                                                                      --------->HSFB2a(2)                                                                      <---------HSFB2a(2)                                                                      --------->LBD16                                                                    ===================HOX2a_HOX2a                                                                    ------>ZmHOX2a(2)                                                            --------->ARR14(2)                                                            <---------ARR14(2)                                                           ===============HOX2a_HOX2a                                                           <------ZmHOX2a(1)                                                           ================HOX2a_HOX2a                                                      --------->CCA1(2)                                                 ----------------->AGL3                                             --------->WRKY38(1)   <------ZmHOX2a(2)                                             --------->WRKY12      ====================HOX2a_HOX2a                                      ---------->DOF2--------->ARR14(2)          --------->ARR14(2)                                 ----------->GT1-------->ZAP1     <---------ARR14(2)    <---------ZAT18        <---------At4g35610<---------WRKY18(1) --------->ARR14(2)     ----------->GT1    --------->ZAT18    <---------ARR14(2)    --------->WRKY45   --------->LBD16  <---------ARR14(2)   --------->DOF5.7(2) --------->ARR14(2)    ----------->HVH21<---------LBD16    --------->ARR11(3) -------ARR14(2)   <-------TEIL  =================================HOX2a_HOX2a   <------ZmHOX2a(1) ---ZmHOX2a(1)<---------ANAC46   ------>ZmHOX2a(2)   <---------ARR14(2)     --------->ALFIN1   ------   gaatcgttcactagtggagggtccatttccgatgatcgtaaaaagggttgacccagatttaggacccggatccgagaagtgaggaacttgatagaaaaaa  25151900                                                                                                 <---                                                                                                 ----                               <---------ANAC58          --------->ZAT18                       ======                          <---------ANAC58            <---------ANAC46                         <-----                          <---------ANAC58            <---------bZIP60(2)                    <-------                        --------->ARR11(3)           <---------AtMYB61                  --------->ANAC58                        <---------ARR11(3)     <---------ANAC46                         --------->ANAC58      --------->DAG2<---------ANAC58           <---------ANAC58                     ----------->GT1    ---------->DOF2 <---------ANAC58       <-------GAMYB--------->ALFIN1     ------>ZmHOX2a(2) ------ ---->DOF2      <----------DOF2<---------ANAC58<---------ANAC58             <------ZmHOX2a(2)--------   agaaggaaaaggtttgagctttgcgaggtcttgtcttgtttatagggttgtgtgtgaggtggacaaatagagagagagatcggagaaggtaagacagatg  25152000        ---------->DOF2       --------->ICU4     --------->YAB1                                                  --------->YAB1    <---------ZAT6                                                   <---------ICU4        <---------AHL20(1)  ----------->GT1                                                   --------->AHL20(2)     --------->ARR11(3) ------ANAC46                                                --------->GLK1(2)<---------ZAT2      <-- ----->ALFIN1                                                <-----------ARR10<---------At4g35610 <-- ==================bZIP_DOF                                  --------->ARR11(3)     --------->TOE2(3) ----TGA1a    *TSS      ------------>CBF               --------->HSFB2a(2)    --------->At4g35610---- --At4g35610--------->ANAC46                 ------------>CBF<---------ARR11(3)    --------->REM1(1)< --->ALFIN1 --------->ANAC58       <---------YAB1      <---------HSFB2a(2)    --------->ZAT2   <----- ->At4g35610--------->ANAC58     <---------At4g35610<----------DOF2 <---------AHL20(2)     --------->AHL20(1)   tgggtagtgataatgcgccactagtatgcaatggaagatgatttatcaccaatactttcagaaaatctcattaattacacagcttacatcaaatattttg  25152100                                                                            <---------AHL20(2)                                                                         --------->AHL20(1)         ----------->TBP                                                 <---------ARR11(3)         <---------YAB1    --------->YAB1                                --------->AHL20(2)      ---- --------->ARR14(2)        ----------->GT1 <---------ANAC58              --------->ARR11(3)     <---- <---------ARR14(2)    <---------YAB1      <---------ANAC58              <---------AHL20(1)     ----- -------ANAC58   --------->AHL20(1)     <---------MYB52(1)              --------->CCA1(2)  <---------MYB59 -------ANAC58   <---------AHL20(1)   <---------ANAC58                 <---------ARR11(3)  --------->TOE1(3) ------------->AGL1  <<<<<<<<<<<<<<<<<LFY  <---------ANAC46            --------->ARR11(3)  --------->TOE2(3) ---------MYB52(1)<---------ICU4      <---------ANAC58             ---------->DOF2  <------NtERF2<--- ------GT1    --------->AHL20(2)    <-----------GT1        --------->AHL20(2)     <---------ANAC46   ccgtttctgttataaaaaaaatattacaatggtaaaattttcgtttcgtttagaaacaaaattgaatagaaaagatatattatggcgcaataacctaaat  25152200                                                                         <---------ZAT6                                                                 <---------YAB1                                                               <---------AHL20(2)                                                               --------->AHL20(2)                                                              <---------AHL20(2)                                  <---------ICU4              <---------AHL20(1)             --------->AHL20(2)  <---------ATHB51             --------->AHL20(2)          --------->YAB1<---------ARR11(3)                 <---------AHL20(2)                    <---      --------->YAB1    --------->ARR11(3)                 --------->AHL20(2)                  <----- ----->AHL20(2)        --------->RVE1(1)                  <---------AHL20(2)       <----------DOF2 -----AHL20(2)      --------->YAB1--------->YAB1    <----------DOF2    <---------At5g28300    <------ ---->AHL20(2)     --------->AHL20(2)   <----------DOF2   --------->AHL20(2)  <-----------------AGL1 ------ICU4 --------->AHL20(2)   --------->ICU4     ------>ZmHOX2a(1) <-----------GT1 ----------->GT1   aatttctatcaaaaataaaaaataaaaatctcacaattatgtcttttagttatcctttgattaaattattttttactgtgaacaactttggtaattttac  25152300                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                               <---------At4g35610                                              -----                      <------ZmHOX2a(1)                                      ========================                  ---------->DOF2                                            <----------DOF2  <------        --------->AHL20(2)     <---------CCA1(2)                     --------->YAB1          -------- ------ZAT6      --------->AtMYB61                                  <---------ATHB12         -------- ----At5g28300  --------->ANAC46                 <-------TEIL     ------>MYB46(1)          <---------ICU4 -----GT1     --------->ANAC46------->TEIL  --------->AHL20(2)    ------>MYB83  ----------->GT1 <----   tgtgaacaacttaaatacaccaaaggacaatgcatctctcttagaaaaaaatacatactagcaaaaccaaatcatgttactttggtaatttcattctgac  25152400      <------ZmHOX2a(1)     ----------->GT1    <---------TOE1(3)    <---------TOE2(3) -----ANAC58 -----ANAC55(2) -----bZIP60(2) -----ANAC46 -----ANAC55(1) ---->TGA1a -----O2 -----TGA1a ---->O2                                      --------->SPL7 ---->ANAC55(2)                             <---------SPL7 =====bZIP_DOF                            --------------->AtSPL8            ------>ZmHOX2a(2)     <-- ---TGA2(2)                             ============================HOX2a_HOX2a             --------- --->TGA1       ------->TEIL            ------>ZmHOX2a(2)        --------------->AtSPL8     --------- --->HVH21      <---------ARR14(2)    --------->ARR11(3)     ======================HOX2a_HOX2a <----- -----ANAC58    --------->ARR14(2)    <---------ARR11(3)     ------>ZmHOX2a(1)           --------->YAB1   gtgtttaaggaaaaaacgtatatgtttggattaaaaatttgatcttcgtaccatatgtccatcctagtaagtactcgatcgcctatgtttacaataatat  25152500  Previous    Next  AGI:  At5g62610.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to ZCW32 (BIGPETAL, BIGPETALUB), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G59640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62472.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 25150125    to: 25152014    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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