Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------ANAC58     <---------ANAC46                                                                      --------->ANAC55(2)     <---------ANAC58                                                                      <---------ANAC46     --------->ALFIN1                                                                      <---------ANAC55(2)   <---------ANAC46                                                                        <---------ANAC58   <---------ANAC58                                                                        <---------ANAC58   <---------ANAC58          <----------DOF2                                          <---------ICU4 ---->YAB1              <---------DAG2                                               <---------YAB1 ----YAB1           <---------ZAT14                   <-----------GT1              <---------ICU4---- --ICU4             <---------ZAT18              <---------YAB1                   --------->ICU4 <--- ->YAB1             --------->ZAT14            <-----------GT1                    <---------YAB1 <--- >ICU4  --------->ZAT18 <----------DOF2    <---------YAB1     ---------->DOF2<---------At4g35610 ----   atatggtgtgtgcattactcagtctacttttcttttgtcaaatttctaattacgattaacttaacaaagcttgaactatagctcataatttttgcgtaat  25126800                            ----------->GT1                            <------MYB83                           --------->MYB59                           <---------MYB46(3)                           --------->MYB111(2)                           --------->MYB46(2)                           --------->MYB111(1)       <----------DOF2                          <--------P                 ================================================                          <---------MYB55(1)         <---------------AGL15                  --------->ARR14(2)                 <---------DAG2             ----------->GT1<------MYB46(1)         <---------DAG2     --------->AtLEC2  <---------TOE2(2)         <-----------GT1   <---------ANAC58    <---------TOE1(2)        <---------ARR11(3)   <---------ANAC58   ------>ZmHOX2a(1)         --------->ARR11(3)   <---------ANAC46  --------->TOE2(2)      ---------->DOF2 ----->AHL20(2)   <---------ARR14(2)     <-----------HVH21                                          - ------AHL20(1)  --------->GLK1(1)   <---------AHL20(2)             <-----------GT1<---------ARR11(3) ------AHL20(2)  <---------GLK1(1)  <---------AHL20(2)            <---------AHL20(2)    --------->ATHB12 ----->AHL20(1)  <---------CCA1(2)  --------->AHL20(2)           --------->ICU4    --------->ARR11(3)   aaattccttgcaaaatagtatatcctaggttggtaaaattaaatgtcaaagatacctttttggagtatttattccctatttgtaagttcttgatttgata  25126900                                                            --------->ARR11(3)                                                          --------->ICU4                                           --------->ANAC55(2)                                           <---------ANAC58 <---------ARR11(3)                                           <------MYB83 -------->HAHB4                                           <---------ANAC55(2)                                   <---------ICU4       <---------ICU4                                  --------->ICU4        --------->YAB1                               <---------YAB1          <---------ATHB12                   <---------ICU4 <---------YAB1       --------->ICU4               --------------->AGL15       <---------ANAC58--------->YAB1              =======================================================================================              <-----------------AGL3       <---------ANAC55(1)--------->YAB1           --------->AHL20(2)              <-----------------AGL2       <------MYB46(1)<---------YAB1             --------->TOE2(3)              ----------------->AGL3 <---------YAB1   <---------TOE2(3)              --------->YAB1 ===============================MADS_MADS --------->MYB111(1)<---------YAB1  <----------DOF2    <---- ---------->GT1<---------------AGL15 --------->ICU4  --------->YAB1         <---------DAG2      -----   ctgtgttaaatgagaaactatttatggctcatggtgattattattaggtgtccattaatgatgatcatcaattcatcacctttacaatattaattcttct  25127000            --------->AtLEC2                                     <-----------RAV1(1)  --------->DAG2                      <---------MYB52(1)      <---------MYB52(1) ---------->DOF2---------->DOF2     ----------->GT1         <---------ANAC58 ===========MADS_MADS       <-----------HVH21               <---------ANAC58 -----------AGL15        <---------GLK1(2)        --------->DOF5.7(2)                             --- ---------->AGL15--------->DAG2     <---------MYB46(3)      <---------ANAC46      <---------At4g35610   caaaaaagtaaaccatgaaaaagtcaagaatgtcagagtcgttactatcagcgttaccaattccgttttgttgtcccttgatttagctaataaacaaaaa  25127100                                                                        <---------ATHB12                                                                      <-----------GT1                                                --------->LBD16  <------MYB46(1)                                              <---------LBD16    ----------->GT1                                            <-----------GT1      <------MYB83                                     <---------MYB52(1)     <---------MYB46(3)      <----------DOF2                                    <-------GAMYB          <XXXXXXXXXXXXXXXXXXXXMIR171A               --------->LBD16     <------MYB83 ----------->GT1 --------->MYB59    <---------DAG2             <---------LBD16       <------MYB46(1)         <XXXXXXXXXXXXXXXXXXXXMIR170 ------>AHL20(2)                  --------->MYB59        <------------CBF--------->YAB1           ---   tcaaatagatagttttccggtttaatctaacttggttcggttgatttttccggttaatctattggttcggtttaatcatccaaaaccttttggactgtat  25127200                                                 <----------DOF2                                       --------->ATERF1(1)                                       --------->RAP2.3(1)                                       <------NtERF2                  <----------DOF2     <---------ATERF1(1)                 *TSS                 ------>NtERF2                                               <--             <---------ANAC58         <---------At4g35610                                        <---           <-----------GT1           --------->ARR14(2)                                          ----        <---------ICU4   <---------AHL20(2)<----------DOF2           ------>ZmHOX2a(1)         <----- ------->DOF2<---------ANAC58        <---------ARR14(2)           ------>ZmHOX2a(1)          --------   caaagactgaatattacgagctttgatttttttagctcggagccgcttcttctttcttcatcttcttcctcctctcaataacccaagttttttcgccgat  25127300                                              <---------ATERF1(1)                                              ------>NtERF2                                              --------->LBD16                                             ------->GAMYB                                             --------->ANAC46                                             --------->RAP2.6(2)                                             --------->ANAC58                                            --------->MYB46(3)                                     <------ZmHOX2a(2)                                    <---------ARR11(3)                                    --------->ARR14(2)                                    <---------ARR14(2)                                  --------->MYB46(3)                                  <---------ATHB12 <---------ALFIN1                                 ------>MYB83--------->ANAC58        --------->ANAC58         ------>MYB46(1)   --------->AtMYB61                              ---        --------->ANAC58        --------->MYB52(1) --------->ZAT6                               ----- ----------->GT1               --------->AtMYB61  --------->MYB46(3)                            ----- -------ANAC46                 --------->DEAR3(1)------>NtERF2                               -------- ------MYB46(3)               --------->MYB46(3)--------->DEAR3(1)  ----------->RAV1(1)    <---------LBD16 ----->MYB55(2)         <----------DOF2 ------>ZmHOX2a(1)   <---------DAG2               <---------ALFIN1 ----MYB52(1)    <---------HSFC1(2) --------->ARR11(3)      <----------DOF2   --------->ANAC46  <---- ->DEAR3(1)      --------->HSFC1(2)------->GAMYB<---------ALFIN1   --------->ANAC46     <---------ZAT14   gggtggaaacaagcagagatggttctctttccaccaacgatcctcatccgccaccactactactttaccacaacacaaacacgacgagactccaccggag  25127400                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                               <---------ARR14(2)                         <---------TGA1a                      =================HOX2a_HOX2a                      ------>ZmHOX2a(1)                    --------->TOE1(2)                  <---------GLK1(1)                        --------->TOE2(2)             <---------LBD16 <---------DEAR3(2)            --------->TOE1(3)          ----------->HVH21 --------->ETT(1)              <---------HSFB2a(1)     ---------->ID1   ==================HOX2a_HOX2a   <---------WRKY12 ==================================bZIP_DOF           <---------WRKY38(1) <----------DOF2  --------->GLK1(1)                 <-----------HVH21 ------>GLK1(2)  <---------GLK1(2)                 --------->LBD16 ---->HSFB2a(1)  <---------ARR14(2)     <------NtERF2--------->WRKY18(1)                            - ---->HSFC1(2)   --------->ARR14(2)   <---------DEAR3(1)  --------->HSFB2a(1)                    ---- ->LBD16 <-----------HVH21<-----------HVH21<---------CCA1(2)                           <---------ANAC58 -----HSFC1(2) --------->LBD16 --------->ARR14(2)<---------LBD16    <---------CCA1(2)  <---------ANAC58   tttctttgtcccatcaccggattcctcatgtcggatcccgtcgtcgtctcttccggtcaaaccttcgagcgtctctctgttcaagtctgtcgtaacttag  25127500               --------->HSFB2a(2)               <---------HSFB2a(2)               ------>ZmHOX2a(1)               ==========================HOX2a_HOX2a           ------>ZmHOX2a(2)          --------->GLK1(1)          <------ZmHOX2a(2)          <---------GLK1(1)         --------->ARR14(2)         <---------ARR14(2)         --------->ARR14(3)         <---------ARR11(1)         --------->ARR11(3)                                                                  --------         <---------ARR11(3)       <------ZmHOX2a(2)                                         =========         <---------ARR14(3)      <-----------ARR10<-----------------AGL1                    ------>ZmHOX2a(2)         <-----------ARR10       --------->ARR14(2)                                         =========         <---------AGP1          <---------ARR14(2)                                         =========        <---------ARR14(1)       <---------ARR11(3)                                     ----------->HVH21        <---------CCA1(2) --------->ANAC46   <---------MYB52(1)                       <---------ANAC46       --------->LBD16    ----------->HVH21 <-----------HVH21                       <------MYB83     <---------LBD16 <---------SPL7--------->HSFB2a(1)             <<<<<<<<<<GATA-1 <------MYB46(1)--    --------->MYB52(1)   --------->MYB46(3) <-----------TGA1      --------->GLK1(1)<---------AtMYB61   <-----------GT1 --------->ANAC46------>ZmHOX2a(2)      --------->ANAC58        <---------MYB52(1) <----------TaMYB80--------------->AtSPL3  --------->DREB2C(2)    <---------GLK1(1)<---------MYB46(3) --------->TaMYB80 --------------->AtSPL8  --------->DEAR3(1)  <---------ATHB12  <---------At4g35610 ------->GT1   ===========================HOX2a_HOX2a     --------->ANAC58       <-------GAMYB    ---   ggtatataccggatctcctagacggtacccgacccgatctttccaccgtcatccccaatctcgcaatgaaatccaccattttcagttggtgtgatcggca  25127600                  ------>ZmHOX2a(1)            ------>ZmHOX2a(1)                                                                     ---         ------>MYB46(1)    ------>NtERF2   <------NtERF2                                         <--    <---------WRKY18(1)     --------->At4g35610      ----------------->AGL1                     -----   --------->WRKY12         <---------At4g35610  <---------ANAC58                   --------->LBD16 <   --------->WRKY38(1)    <---------RAP2.6(2)<---------MYB46(3)         ------>ZmHOX2a(1)     <------   --------->WRKY45----------->RAV1(2)      --------->ALFIN1          ------>ZmHOX2a(2)  ---------->DOF2 --->GT1 ------>MYB83------>ZmHOX2a(1)    <---------ANAC58           <------ZmHOX2a(2)  <---------WRKY38(1) ==================HOX2a_HOX2a   <---------ANAC46--------->MYB52(2) --------->ARR11(3)  <---------WRKY12 ===========================HOX2a_HOX2a   <---------ANAC46          <---------ARR11(3)  <---------WRKY45 ========================HOX2a_HOX2a      <---------ANAC58          <---------ARR14(2) --------->WRKY18(1) ------->DAG2--------->TOE2(1)  --------->SPL7   <---------ANAC58   --------->ARR14(2)<-----------HVH21 ------->DOF2--------->TOE1(1) <---------TGA2(2)<-------TEIL    ---------->DOF2   <---------LBD16 <--   aaaagttgaccatcctcgtcctcctgatgccgcttacgtcgaaggcgtggttcgtgcccgaatggataaagatcctaatccaagtccgggtcaaagtccg  25127700  Previous    Next  AGI:  At5g62560.1    Description:  armadillo/beta-catenin repeat family protein / U-box domain-containing protein. similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G47820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64395.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 25127217    to: 25129227    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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