Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->ARR11(3)                                                                       <---------ARR11(3)                                       --------->TOE2(3)               <---------ARR14(2)                         --------->AHL20(2)                           --------->GLK1(1)                        <---------AHL20(2)                            <---------GLK1(1)                   <---------AHL20(2)  --------->TOE1(3)              <---------CCA1(2)                  --------->AHL20(2)   <---------MYB59                <---------RVE1(1)                 <---------YAB1       <---------ANAC55(2)          <------NtERF2            ----------->GT1<---------YAB1                        <---------ANAC46                  --       <-----------GT1  --------->AHL20(2)                       --------->ETT(1)                 <--  <---------AHL20(2)  --------->YAB1--------->GLK1(1)         <-----------RAV1(1)               -----   tgatataatttacaatgttattaaaaataatttttgggatacctaaacgttttagatgttcagtctgtcgggatatcttggagacttaacttattgatca  25091700                                                     --------->AHL20(2)                                                     <---------AHL20(2)            ---------->DOF2                         <---------AHL20(2)          ----------------->AGL1         <---------ARR11(3)     <---------ICU4                      --------->ARR11(3) ------->YAB1              ---------->DOF2  <----------DOF2     <---------ANAC46      <---------AHL20(2) -------ATHB12    <------ZmHOX2a(1)    ------->TEIL --------->ICU4       --------->MYB52(1) ---->WOX13(1)  ----------->GT1     <---------MYB52(2)   <-----------GT1<---------AHL20(2)   atcacaatttttgccaaagaggaaaatgtcaaagtcaaacgaacatcttttgaaattatttacatctcgtggaattaatggaacttcttaaatttttcaa  25091800                    <---------AHL20(2)                  <---------AHL20(2)                 <---------AHL20(2)                 --------->AHL20(2)                 --------->ARR11(3)                 <---------ARR11(3)                 <---------AHL20(1)                                                             -----                 --------->AHL20(1)                                           --------->TOE1(3)<-----        --------->ATHB12                   <-----------GT1              --------->TOE2(3)     -------        --------->ATHB51              --------->WOX13(1)             <---------ALFIN1    <---------HSFB2a(2)       <---------YAB1           <XXXXXXXXXXXXXXXXXXXXMIR844     --------->WRKY18(1)      --------->HSFB2a(2)       --------->ICU4 <---------AHL20(2) --------->YAB1       ------->GAMYB   --------->YAB1 --------     <---------------AGL15   <---------ANAC58                --------->MYB46(3)  <---------AHL20(2)    <-----------------AG     <---------ANAC58          --------->WOX13(1)     --------->TOE2(3)<-----   aaatttgacataattggaatatattttttttgcttctagtcaatcttaccatattatctatcaacagtcaaacacctcaatcttaaattttctaaaaata  25091900         <-----------GT1     --------->AHL20(1)    <---------AHL20(2)    --------->AHL20(2)    --------->ATHB51                                                           <-------TEIL   --------->ICU4      ---------->DOF2                                      <------MYB83 ---->MYB52(1)     --------->MYB59                                          <------MYB46(1) ----ATHB51---------->ID1                                                   ----------->GT1     <---- -->AHL20(1)--------->YAB1      <---------YAB1            ---------->DOF2  <---------------AtSPL8 ->YAB1 <---------AHL20(2) ----------->GT1          --------->ARR11(3)     --------------->AtSPL8 ----AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <---------ARR11(3)     --------->MYB59      <----   atggaattattttatcgtattttggtaaagagttatttttgtaatattatctaaaatctaaaaagaaccaagatagataggtacaaaaaaaaaaaaaact  25092000                                                                                                  ---                    --------->YAB1                                                    <-----------GT1                   <---------YAB1                                               --------->AHL20(1)---                 --------->YAB1           --------->TOE2(3)                     <---------AHL20(1)<--          --------->ARR11(3)      <-----------HVH21                          --------->AHL20(2)   <--          --------->ARR14(2)   <---------ANAC58             --------->LBD16  --------->YAB1      ----          <---------ARR14(2)   <---------ANAC58           <---------LBD16    <---------AHL20(2)  ----          <---------ARR11(3) <---------At5g28300--------->TOE2(3)        --------->AHL20(2)      ---- -----DAG2--------->GLK1(2)  <---------DOF5.7(2)------->GAMYB            <---------AHL20(2)   <------ ------DOF2  <---------YAB1--------->DOF5.7(2) --------->MYB46(3)<---------ANAC46<---------AHL20(2)   tttttttgtgaaaatctgattatcataacgttaccgtgtcaaatcgtcaacctccataactccggttttgtgtatttaattatatatttatctgtttaca  25092100                                            ------>MYB83         *TSS                 <---------ARR11(3) ---->MYC3                    --------->ARR11(3) ---->MYC2                    --------->AHL20(1) -----MYC2             --------->At4g35610  ------>MYB46(1) -----MYC3         --------->ANAC55(2)    <---------MYB59 ----->ANAC58    <-----------GT1     <---------HSFB2a(2)                                         ---- ----->ANAC58    <---------AHL20(2)  --------->HSFB2a(2)                                         <--- ----->ANAC46  <---------WOX13(1) <-----------GT1      --------->ANAC58                 <---------At4g35610 ---REM1(2) <---------YAB1    <---------AHL20(1)       --------->ANAC58                 --------->At4g35610   cgcgcttcgaaattttgatttacttatctgaatatttttccagaccgaacatcaaacaagaaaacacatttgtccgaatttcatcttgagagctgtttgt  25092200                                                                            <---------ICU4                                                                            --------->ATHB51                                                                           <---------YAB1                                                            --------------->AGL15                                                            <---------------AGL15                                                           <-----------------AGL1                                                           <-----------------AG                    <---------At4g35610                   <<<<<<<<<TBF1    --------->ICU4                   <---------ARR11(3)              <---------RVE1(1)     --------->YAB1     --------->ANAC58                             <---------ARR11(3)     <---------ICU4     --------->ANAC58                           --------->ANAC58        --------->ICU4     --------->ANAC46    <----------DOF2        --------->ANAC58        <---------ATHB12         <--- ----->ZAT18       --------->ARR11(3)         <-----------GT1           <---------YAB1          <---- ------ZAT18 ---------->DOF2    <---------ALFIN1--------->ANAC46   --------->ANAC55(2)       <-------   gcccttcaagaaatcgaaagagagcttctttcccccattttctgcgattcacgatatttcttcttctataggtaatcataatttgatcatcttctctttt  25092300                                      <--------P                                      <---------WOX13(1)                                     <---------ANAC58                                     <-------GAMYB                                     <---------ANAC58                                    <---------MYB46(3)                                    --------->MYB52(2)                                    --------->MYB55(2)                                    <------MYB46(1)                                    <------MYB83                                   <---------MYB46(3)                                   <---------AtMYB61                                   --------->MYB111(1)                                  <--------P                                --------->ATHB12                                <---------MYB46(3)  <----------DOF2              <---------YAB1                             <----------DOF2 --------GT1                   <---------TOE2(3)                      ----------->HVH21 -----CCA1(2)                  <---------TOE1(3)             <---------YAB1                      ---- ---DOF2  <----------DOF2      <---------AtMYB61<----------DOF2 <---------GLK1(1)                ----   atctctttttttctttcattttcttcttgggttatggttggttgattctgctatttgggaattttgatttctgtgacttttggggtttcaatttcattcc  25092400                                                                                <------MYB46(1)                                                                         ----------------->AG                                                                       <-----------GT1                                                                     <----------TaMYB80                                                                     <---------HSFB2a(1)   ----------                                                                     --------->HSFB2a(1) <---------ANAC46                                                                    <---------ARR14(2)   <---------ANAC58                                        --------->ATHB12            --------->ARR14(2)   <---------ANAC58    <---------YAB1                     <---------YAB1           <---------LBD16 <------MYB83 -->ZmHOX2a(1)              <----------DOF2                  >>>>>>>>>SARD1    <---------TOE2(3) ----->LBD16      ----------->GT1    <---------AtLEC2        >>>>>>>>>CBP60g   --------->MYB59      <   tgaattgtgatggaatcgaatggtatctctcttttgttttcatggttgagatgtgattctgaaatttggggattttccgattaggtttatgtcttgaaaa  25092500                                         ------>ZmHOX2a(1)                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                     <---------ARR14(2)                                     --------->ARR14(2)             --------->LBD16                                     <---------GLK1(2)             --------->LBD16                                     --------->AGP1               <---------LBD16            <----------ID1           <---------ARR11(3)   <---------ARR11(3)       >>>>>>>>>SARD1                --------->ARR11(3) --------->ANAC46             <---------TOE2(3) ->GT1 >>>>>>>>>CBP60g              <---------At4g35610 --------->ANAC58         <----------DOF2 ---------LBD16 ---------->DOF2    ----------->ARR10    --------->ANAC58       --------->LBD16   tttggggaaatttggagacaaagacatattttaaactcagatcctaatctcttccaccaagacattttccctgaattgttccgctttaatgaaatgaaat  25092600  Previous    Next  AGI:  At5g62460.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G47550.3); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G47550.6); similar to unnamed protein product [Vitis vinifera] (GB:CAO64548.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain Zinc finger, variant RING-type; (InterPro:IPR011016) Range:  from: 25092109    to: 25094520    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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