Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->YAB1                                                                    --------->ANAC58     <-------TEIL                                     --------->At5g28300               --------->ANAC58 ------->TEIL                                 <---------AHL20(2)                        ------>ZmHOX2a(2) ->AHL20(1)                                   --------->AHL20(2)     --------->YAB1   <---------ARR14(2) --AHL20(1)                                  <---------YAB1   <---------ANAC46        --------->ARR14(2) >AHL20(2)               <---------ATHB12    --------->ICU4  ---------->ID1      <---------ANAC46   atgtatattcatgagacaaacattcaaatcaaaaaccatcatgtgtaattaatgacagtaattgtcgtttatcgtaatcgttgttgtggatcgccattcg  25057500                                      ------>NtERF2                                      <---------ATERF1(1)                                     --------->DEAR3(1)                                     <---------ZAT18                                    --------->DEAR3(2)                                             <-                                  --------->MYB52(1)          =======================================                                <---------MYB52(2)     ---------->DOF2                            ---                              ------>MYB46(1)        <---------YAB1                   ------>ZmHOX2a(2)                              ------>MYB83         --------->CCA1(2)                --------->ARR11(3)           <---------ZAT6   <---------MYB59       --------->ARR11(1)            --------->YAB1 ------           ----------->GT1  --------->MYB46(3)    --------->ARR11(3)     --------->ZAT18   <---------     --------->ANAC58      --------->ANAC58       <---------ARR11(3)     <---------ZAT18   <<<<<<<<<GT-1     --------->ANAC46      --------->ANAC58     <---------YAB1----------------->AGL3<---------ARR11(3)     --------->ANAC58    <------ZmHOX2a(1)      <---------TOE2(3)  --------->YAB1<---------KAN4(2)<--   ctatcgcaagcaagtgttaaacgaataggacccaactagccgactccattaagatatgaaagagaccaaaaatagcccactagaatgatctattaaccaa  25057600                                                                                                   <-                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                               ------            <---------YAB1                                                                    -------            <---------------AGL15                                                            --------            --------------->AGL15                                                            <------NtERF2           ----------------->AGL3                                                           ------>NtERF2        --------->KAN4(2)                                                                   <--------     --------->ARR11(3)                                                                     <--------     <---------ARR11(3)                                                                  <-----------HVH21 --------AHL20(2)                              <---------YAB1                           <-----------RAV1(1) ===========================MADS_MADS    <---------YAB1                                 --------->ALFIN1 ------>AHL20(2)                     --------->YAB1                                 --------->MYB46(3) --->WOX13(1)                     --------->WOX13(1)          <----------ID1       >>>>>>>>>>>>>>>>>LFY --GT1<------ZmHOX2a(2)          <---------AHL20(2)         --------->ZAT6       --------->MYB46(3)-- -------AHL20(2)                 --------->AHL20(2)   ---------->ID1             --------->REM1(1)---   ttaaatagatcattctaaatgtagttaatgcttaattaatcatatgattatgttttgtcttaaaactacaaattccaaaccctacaaccagtgtcgcctc  25057700      <-----------HVH21     <----------DOF2    <---------ANAC46    <---------ANAC58    <---------ANAC58 ----------RAV1(1) ------ANAC58                      <-----------GT1 ------ANAC46                     <-----------GT1                            --------->ARR14(2) ------ANAC58                <---------MYB52(1)               --------->ARR11(3) >NtERF2                  ---------->ID1                      --------->ARR14(2)          --------->O2 -->DEAR3(1)             <-----------GT1                      <---------ARR11(3)       <---------ZAT18 ->ATERF1(1)           <---------AHL20(2)                    --------->RVE1(1) <<<<<<<<<<<<<<<<<LFY -RAP2.3(1)        <---------RVE1(1)            <---------ANAC46             <---------ARR14(2) -ATERF1(1)        <---------CCA1(1)            <---------ANAC58            <---------GLK1(1) ------->ALFIN1   --------->ARR11(3)            <---------ANAC58  <---------YAB1  <------------CBF ------>LBD16     <---------ARR11(3)    <---------ALFIN1     --------->CCA1(1) >>>>>>>>>>>>>>>>>LFY   cgtgttgctttcacatgttagatattttttcgtttttttcccccatttttgtgtgtgtgagaaatatcttcattatgcaaatcccattggccacttgatt  25057800                                                                     <---------HSFB2a(2)                                                               <---------ICU4                                                              ------------>CBF                                                              <---------ATHB12              <--------                                                            --------->WOX13(1)         <-----------GT1                                                          ------------>CBF          <---------ICU4                                       ----------->TBP--------->ANAC55(2)          <---------YAB1                                  <-----------GT1     <---------ANAC55(2)          --------->ICU4  --      <---------DAG2         <---------DAG2         --------->AHL20(2)     *TSS  --------->YAB1   ---      <----------DOF2        <----------DOF2   ------------>CBF--------->YAB1   <---------YAB1 ------   tttaagtgctttttaaaaaaaaaaacgtctcctttttctctatataaaccccaattacataacaatcaatactagaaaacatatcattatcacactttca  25057900                                                   <---------ICU4                                                   --------->YAB1               <---------ICU4                                                  <---------YAB1             --------->YAB1                                                --------->YAB1               <---------ICU4                                      <---------GLK1(2)                     --------->ICU4                                    <---------TOE2(3)                     --------->YAB1   <--------- --DOF2                         <----------DOF2 <---------ICU4--------->ANAC46  --------->YAB1 ------->DAG2                ------->TEIL    --------->WOX13(1)     <---------DAG2        <---------- ------->DOF2                --------->GLK1(2) <---------ATHB12     <----------DOF2     --------->AtLEC2 --->YAB1   <-------TEIL----------->GT1 --------->KAN4(1)    ------>ZmHOX2a(1) <---------YAB1   taaagctcataacatacataaaaaatgggtgaatcttttagattattcaatcatcatcacttcctcacaacttttctcataatcatagccatgctcaaat  25058000                                       --------->MYB46(3)          <----------DOF2                                     ------->GAMYB            --------->AtLEC2        --------->GLK1(2)                                    --------->MYB46(3)     <---------YAB1      --------->ANAC58 <-------TEIL                     ----------->RAV1(1)    <---------ICU4        --------->ANAC58 ------AGL15            --------->REM1(1)        ----------->GT1 ------->TEIL ------->TEIL        --- -------AGL2      --------->MYB46(3)<---------MYB52(2)   --------->YAB1     <---------SPL7        <--   tggttcatacaacaacaacaacaactacaacaacaacaacaaacaccgagttcgtaaaatcatcatgcactttcacaacgtacccaagactctgtttctc  25058100                                       <---------ZAT2                                              --                                    <---------ALFIN1           <---------ICU4                      <-                               --------->ANAC58         <-----------ARR10                          <-                               --------->ANAC58        <---------At4g35610          ----------->GT1<-            <---------YAB1     --------->ANAC46       <---------RAP2.3(1)         ---------->DOF2 <-- ------>ZAT14                ---------->DOF2         <---------RAP2.3(2)       --------->At4g35610--- -------ZAT14               <---------ATHB12        <---------LBD16          <---------DEAR3(1)   <--   ttcactctcaactcatgctagtctcatccaaacaagccccaagctcatggctcatgcggctctcaacatcacattagcctcggctaaagtaacttcagca  25058200                                                                                <-------MYC3                                                                                ------->MYC3                                                                               <---------O2                                                                               <---------TGA1a                                                                               --------->TGA1a                                                                               --------->O2                                                                          ----------->HVH21                                                                        <---------At4g35610                                                                        <---------ANAC55(2)                                                                        --------->At4g35610                                                                        <------MYB83                                                                        <------MYB46(1)        <---------CCA1(2)                                               --------->ANAC55(2)      <---------ANAC58      --------->ANAC58                           --------->MYB111(1)      <---------ANAC58      --------->ANAC58                           --------->MYB111(2)     <-------TEIL      --------->At4g35610                             --------->MYB59 ------->YAB1          <---------At4g35610                             --------->MYB46(2) --------ICU4          <------NtERF2                                  <---------MYB55(1) -------ATHB1         <---------DEAR3(2)                          <------ZmHOX2a(1) -----------ATHB5    <---------ZAT18                           <---------HSFB2a(2)       --------->At4g35610 -------ATHB12       <---------DEAR3(1)                        --------->HSFB2a(2)     <------ZmHOX2a(1) ------>ICU4--------->HSFB2a(2)  ---------->DOF2            <-----------HVH21 <<<<<<<<<<ABI5     ---- -------ATHB51       <---------RAP2.3(3)     ------>NtERF2 <---------ANAC46   <<<<<<<<<<BZIP12 <-----   atgatggtgcgtctctcgaatagtcggctcaagcctaaagaagtctcggccatgagagactgcgtcgaggagttaggtgacacgttggaggagcttagga  25058300                                                                                      --------->At4g35610                                                                                 ----------->HVH21                                                                           <---------RAP2.6(2)                   <---------ZAT2                                          <---------DEAR3(1)     <------MYB83  --------->At4g35610                                    --------->RAP2.6(3)     <------MYB46(1)                                                      <---------ZAT18    <---------MYB46(3)      <---------ANAC46                             --------->ALFIN1        ---- --------->ATHB12  <---------At4g35610                              <-----------HVH21 <---------At4g35610 ----->GLK1(1)     --------->ZAT2                              ===========================bZIP_DOF -ZmHOX2a(1)   <-----------HVH21                               <---------TGA1a <----------DOF2   <---   aatcgattggtgagatgtgtcagctaagtggctcgaactatgaagtttacataagcgatatacagacttgggtcagtgcggctttgacagatgtgaacac  25058400  Previous    Next  AGI:  At5g62360.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22) [Arabidopsis thaliana] (TAIR:AT5G62350.1); similar to pectin methylesterase inhibitor isoform [Solanum phureja] (GB:ABG49144.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 25057875    to: 25058688    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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