Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->TOE2(3)       --------->YAB1              --------->YAB1      <---------ATHB12          --------->YAB1               --------->ZAT6  <---------YAB1          <---------REM1(1)             <----------DOF2                           --- -----------GT1        --------->ALFIN1           --------->YAB1                           --------->YAB1 ------>ARR11(3)    <---------TOE1(3)  --------->DAG2   --------->TOE2(3)               --------->YAB1 ----->RVE1(1)      <---------TOE2(3) ---------->DOF2<-----------GT1  --------->CCA1(2) <---------ICU4 ->AHL20(2)--------->YAB1 ----------->GT1        --------->ICU4   <---------TOE2(3)   <---------KAN4(2)   tatcaccattcattaataacttaaggtgttgtaagaataataaagtcagaaattataactttagcactatggatataagaatacaacgaataatcacaaa  25040200                                                                                     <---------TOE2(3)                                                                                    ---------->DOF2                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                  <---------AHL20(2)                                                                              <---------AHL20(2)              --------->RVE1(1)                                        --------->GLK1(2)             --------->ARR11(3)                                        --------->ARR11(3)          --------->AHL20(2)                                           <---------ARR11(1)          <---------AHL20(2)                                           <---------ARR11(3)       --------->YAB1                                              <---------At4g35610  --------->ARR11(3)      <---------YAB1                                  <---------YAB1   <---------ARR14(2)<---------RVE1(1)    --------->TOE2(3)                               --------->ATHB51   --------->ARR14(2)<---------CCA1(1)    --------->YAB1                                  --------->AHL20(2)<---------CCA1(2) <---------ARR11(3)    --------->TOE1(3)     <----------DOF2           <---------AHL20(2)<---------ARR14(1)--------->AHL20(1) ------>YAB1 <---------ARR11(3) XXXXXXXXXXXXXXXXXXXX>MIR865-5P--------->ETT(2)<---------YAB1  <------   tcacaaccataataaaatctctgtctgacttttgaatttggaactaatttagaattattttttgttgacagcaaatctttataatttaaagatattaagt  25040300                                                            --------->YAB1                                                            --------->TOE1(3)            <---------AHL20(2)                                             <---------TOE2(3)                           --------->AHL20(2)                                           <---------AHL20(2)                           --------->AHL20(2)                                       <---------AHL20(2)   --------->TOE2(3)           <---------AHL20(1)                                   --------->ICU4        <-----------GT1        ----------->GT1                --------->YAB1   --------->YAB1--------->YAB1   <---------AHL20(2)      --------->AHL20(1) --------->TOE2(3)          --------->ZAT14--------->AHL20(2)  --------->AHL20(2) <<<<<<<<<<WRKY63 ---TOE2(3)    <---------YAB1 --------->YAB1---------->DOF2<---------YAB1----------->GT1<---------AHL20(2)   taacatcaaatagaagtatcatactataactatagtcatattgaattaaagataacaaattaccataaaatttagatgtaaatagtcaaatttatttatc  25040400                                                                        --------->LBD16                                                                       --------->ANAC46                                                           --------->ATERF1(1)                                                          <---------ATERF1(1)                                 <---------ICU4           <---------GLK1(1)                       <---------KAN4(2)            --------->MYB52(1) --------->LBD16                    <---------ANAC46   <---------------AGL15          <---------LBD16                    <---------ANAC58   --------------->AGL15--------->ZAT18             --------->AHL20(2) <---------DAG2----------->GT1   <---------ALFIN1             xxxxxxxx     <----------ID1 <---------ANAC58  <---------AtLEC2    --------->GLK1(1)     --------->TOE2(3)   tgcaagaagaacaaaaaaaatggcgaatgagccaatttttgcatcaagtagtaaaaacggagtcccccacttcccgcgaaaacctcagtctctctctctc  25040500                                                                                   <---------YAB1                                                                                 *TSS           <----------DOF2                                                      --------->ICU4        ------->GAMYB           <---------YAB1                             ----------->GT1       --------->MYB46(3)  <---------YAB1                                  <---------ZAT6  --------->ANAC46      <---------MYB52(1)                               ----------->GT1       <-----  --------->ANAC58    --------->YAB1                                 ---------->DOF2           <-----  --------->ANAC58    <---------ICU4                               <---------AHL20(2)          ------ xxxxxxxx>smallRNA(s)--------->ICU4 --------->AHL20(2)             --------->AHL20(2)          <-----   tctctcgcaaccgcttctctgtaatcgttatgttttgataaaatcacaaaacaaacaaacaaacaaaaattaaaagagtgtaaatatgaaaattcaaata  25040600                                                ----------->RAV1(2)                                                <------NtERF2                                               ------>NtERF2                                              --------->DEAR3(1)                   <---------ARR11(3)                                            <-----------HVH21               <---------MYB55(2)                                           --------->DEAR3(1)               --------->MYB46(3)                                          --------->HSFB2a(1)              ------>MYB83                                          <---------HSFC1(2)              --------->ORA47(1)                                          <------------AtMYB77           --------->DEAR3(1)                                          --------->MYB46(3)            --------->DEAR3(2)                                          <---------HSFB2a(1)        --------->MYB46(3)                                          --------->DEAR3(2)      ------>ZmHOX2a(2)<---------ARR11(1)                                          --------->HSFC1(2)     <------ZmHOX2a(2) --------->ARR14(2)                                        --------->ARR14(2)      --------->PCF2     <-----------ARR10                                        <---------ARR14(2)      --------->ARR14(2) <---------ARR14(2)                                     --------->ANAC58           <---------TCP20 --------->AtMYB61                                  ----------->HVH21             <---------ARR14(2)<---------CCA1(2) ----AHL20(2)         --------->YAB1 --------->ANAC46       ------>ZmHOX2a(2)--------->AtMYB61 ----ATHB12        --------->YAB1 --------->ANAC46          <---------LBD16------>MYB46(1) --->AHL20(2)  <---------------AGL15 --------->ANAC58    --------->ATHB12------->GAMYB              - ----ATHB51    --------------->AGL15<---------LBD16    <---------KAN4(2)--------->MYB46(3)  ------>NtERF2   attctccacaaatttttctattaataacaaatgtctacgacggaaccgtcgcctgagaatgatcgggatccacaaccgaccaccatatctactccgactt  25040700                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)                       <---------ARR14(3)                       --------->ARR11(3)                       <---------ARR11(3)                       <---------ARR14(2)                       --------->ARR14(2) ------>NtERF2                                         -----             --------->At4g35610     <----------DOF2                                            <----          <---------HSFC1(2)        <---------ANAC58                                    ----------->GT1          --------->HSFC1(2)        <---------ANAC58    <------ZmHOX2a(1)            <---------TOE1(1)          <---------HSFB2a(1)    --------->GLK1(2)    <---------TOE2(3)              <---------TOE2(1)          --------->HSFB2a(1)    <---------ARR14(2)   --------->ANAC58   --------->ANAC58       -----         ----------->ARR10 --------->TOE1(2)          --------->ANAC58   --------->ANAC58       ----- --------->AtMYB61    <---------HSFB2a(1) --------->LBD16               --------->TOE1(2)      <----- -------->MYB46(3)    --------->HSFB2a(1)--------->ANAC46   <------ZmHOX2a(1)     <---------SPL7-----   ccaccaatgcgaagcttctgaagaagatccctgcgattcctttccgccattcggataaggaaggagaagatgaacaagcgaagacggacgaggttactac  25040800                                                                                                    -                                                                                                   <-              <---------ARR14(2)                                                                   --              --------->ARR14(2)                                                                  ---             <---------HSFC1(2)                                                                   ---             --------->HSFB2a(1)                                                                  ---             --------->HSFC1(2)            <---------ANAC58                                      ----             <---------HSFB2a(1)           <---------ANAC58                                      ----       <---------LBD16                 --------->GLK1(1)                                         ----    --------->ZAT2<---------At4g35610 <---------ARR14(2)                                         ----    <---------ZAT2--------->At4g35610 --------->ARR14(2)                                         <---    --------->At4g35610              <------NtERF2                                              <----    <---------At4g35610             --------->LBD16                                          <------- ---->ANAC55(2)  <---------TOE2(1) --------->LBD16                                           ------>ZmHOX2a(1) -----ANAC55(2)  <---------TOE1(1)<---------LBD16           <---------TOE2(2)              --------->At4g35610 ---->ANAC58 <------MYB83  <---------YAB1--------->GLK1(2)<---------MYB52(1)    --------->ANAC58<---- ---->ANAC58 <------MYB46(1) <---------GLK1(2)            ------>ZmHOX2a(1)     --------->ANAC58----- ----LBD16  ----------->ARR10<---------ARR14(2)          --------->TOE2(3) --------->YAB1  ---------- ---->ANAC46<---------AtMYB61--------->ARR14(2)    ------>ZmHOX2a(1)  --------->YAB1       <---------At4g35610   ggaattagctggggaaggtccgatgagtcacgattcgccggaaattcttgctccttcttccttaggtttgaatcatatcagaacgaaatcgtctcctgcg  25040900           <---------ARR11(3)     --------------------->WRI1     <----------DOF2 -------->ATERF1(1)                                                                      <---------MYB46(3) --------ATERF1(1)                 <---------ARR11(3)       <---------ATERF1(1)     <------MYB46(1) ---->NtERF2                       --------->ARR11(3)      --------->ANAC46         <------MYB83 ------>RAP2.3(2)                 <---------GLK1(1)        ==============================MYC_MYB ------>DEAR3(1)         --------->ANAC58                  ================================MYC_MYB  - ------>RAP2.3(3)        --------->ANAC46                  <---------O2            --------->MYB111(2) ----->DEAR4(2)          <---------ALFIN1                  <---------bZIP60(2)     --------->MYB111(1) ----->ORA47(2)          --------->ANAC58                  <---------TGA1a         <---------MYB46(3) ----->RAP2.3(1)       <---------ALFIN1                    --------->TGA1a         --------->MYB46(2) ----->ATERF1(1)     <-----------HVH21                ---------->DOF2              <---------AtMYB61- ---NtERF2 --------->ARR11(3)========================================bZIP_DOF      --------->MYB55(2) -----ATERF1(1)   --------->At4g35610             <---------YAB1<------NtERF2      <---------DEAR3(1) --ATERF1(1)      <---------At4g35610          --------->ICU4--------->ATERF1(1)  <--------P        < -----RAP2.3(1)   ----------->RAV1(2)    --------->LBD16   --------->O2  <---------ARR14(2)         < ->NtERF2<---------TOE2(3)------>NtERF2<---------LBD16===============bZIP_DOF     <---------MYB55(1)- ->RAV1(2) <---------GLK1(2) <----------DOF2--------->WRKY18(1)------>NtERF2     <-------GAMYB      <   ccgtctcctttgagattttcatctgccacgcctttgatatctccgggtcaagatgataaagacgtcgccaaggagaaaccgagggttggtgttgttgatg  25041000                  --------->At4g35610                  <---------At4g35610                <-----------RAV1(2)     <---------At4g35610                -------->P  <---------At4g35610              --------->ANAC46     <---------GLK1(1) ------>MYC3------->MYC2         <---------ALFIN1    <-------TEIL ------>MYC2<-------MYC2       ------>ZmHOX2a(1)    <--------P -------MYC2<-------PIF5       ======================HOX2a_HOX2a -------MYC3------->PIF5   --------->ARR14(2)    <---------TOE2(3)                 <---------YAB1 ------>PIF5------->MYC3   <---------ARR14(2) <------ZmHOX2a(2)              <------ZmHOX2a(1) -------PIF5<-------MYC3  <---------ARR14(2)  <---------ATHB12             <---------TOE2(3)   ctcgtgctgatgctcgtgccagatggccgattcctccacatcaacccgatcaaggtagatttctcgttgattcgatttaggatttatgaattcgaaaatt  25041100  Previous    Next  AGI:  At5g62310.1    Description:  IRE (INCOMPLETE ROOT HAIR ELONGATION); kinase. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G48490.2); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G48490.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G17850.1); similar to nodule-specific IRE-like protein [Medicago truncatula] (GB:AAX11214.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68239.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14530.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR00071 Range:  from: 25040581    to: 25045640    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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