Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->ZAT6                                          --------->SPL7              ----------->HVH21                                          <---------ZAT18          --------->ARR14(2)                                          --------->ZAT14          <---------ARR14(2)  <---------YAB1        ------->MYC3      <---------ZAT14 --------------->AtSPL8 <---------At5g28300    <-------MYC3    <---------SPL7  <---------ARR14(2)                        <-- -----------GT1       <-------MYC3      --------->LBD16 --------->ARR14(2)           --------->ZAT6 ------ICU4           ------->MYC3    --------------->AtSPL8 <-----------GT1---------->DOF2   <------   atttaccattgtttaacatgtacacatgtgtttataaatctccgtacactataatgcatatttgaaccatatatgacagaaagttttccactagttctaa  25033900                                                                                              <------                                                                                             --------                                                                                            <--------                                                                                          <--------HAHB4                                                                                          --------->ATHB51                                                                                          -------->HAHB4                                                                                          --------->YAB1                                                                                          <---------ICU4                                                                                          -------->ATHB1                                                                                          <---------AHL20(2)                                                                                         <---------ATHB51                                                                                         <---------YAB1                                              <---------YAB1                             --------->ICU4                                             <---------AHL20(2)                       --------->AHL20(1)                                           <---------AHL20(2)                         <---------AHL20(2)                               <---------ANAC58         --------->ATHB12             --------->AHL20(2)     <-----------RAV1(1)       <---------ANAC46        <---------YAB1       --------->KAN4(2)<------- ---------GT1     ------>ZmHOX2a(1)        <---------YAB1    <---------TOE2(3)   --------->LBD16 ---YAB1     <----------DOF2   <---------ANAC58        --------->ICU4     ------->TEIL--------->AHL20(2)   ttacattttgttgccctttcctactcgtctattgcctatagaaatattattttagttatgattaagaattgggatgcacattccgaaattaattattaaa  25034000                                                           --------->ZAT6                                                      --------->TOE2(3)                                                      --------->TOE1(3)                                                --------->ANAC58                                                --------->ANAC46                                                --------->ANAC58                                            --------->YAB1<---------At5g28300                                           <------ZmHOX2a(2)                      <---------ETT(2) ---AHL20(2)                               ==============HOX2a_HOX2a        --------->ARR11(3) ->AHL20(2)                               <---------ARR11(3)                <---------ARR11(3) ------ -YAB1                                    --------->ARR11(3)              <---------TOE1(3)    <----- --AHL20(2)                         --------->YAB1<------ZmHOX2a(1)       <---------TOE2(3)    ------   tgccactatgaagaacccttgaacatagtctaattcaattttaagatcataaggaacattaacagtgacaatagctaaggtctctcgacaatgagacaat  25034100                                                                             <---------AHL20(2)                                                                         <---------AHL20(2)          --------->AHL20(1)                                            --------->AHL20(2)          <---------ARR11(3)                                            <---------AHL20(2)          --------->ARR11(3)                                            <---------AHL20(1)         --------->AHL20(2)                                     >>>>>>>>>>WRKY26     --------->AHL20(2)                                         >>>>>>>>>>WRKY43     <---------AHL20(2)                                         <---------WRKY18(1) <---------DAG2                                         --------->YAB1  --------->AHL20(1) <----------DOF2                                   <-------TEIL >>>>>>>>>>WRKY38            <-------- --->ARR14(2)                                     --------->CCA1(2)  ------>MYB46(1)      ----------- ----ARR14(2)                                    --------->ARR14(2)  ------>MYB83      ------>ZmHOX2a(1) --->GLK1(2)  <-------TEIL                       <---------ARR14(2)<---------MYB59 <-----------GT1   ccgctttttaaatatatacatataagagataccatattgtatacatatgcagatacaattacaacttgaccaaatttattcaatttctccttctctttat  25034200                                                                                  --------->TOE2(3)                                                                                  --------->TOE1(3)                                                                                 <---------HSFB2a(1)                                                                                 --------->HSFC1(2)                                                                      ----------->TBP            ----                                                                      --------->AHL20(2) --------->ANAC58                                                                      <---------AHL20(2) ----------->GT1                                                                    ----------->TBP<-----------HVH21                                                                   --------->AHL20(1)    --------->ANAC46                                                                   <---------AHL20(1)    --------->ANAC58                                       ------->TEIL                <---------ARR11(3)<---------ALFIN1   --------->YAB1            ------>MYB83                --------->ARR14(2)      <---------HSFC1(2)*TSS --DOF2         <---------YAB1        <---------CCA1(2)  <---------ARR14(2)---------->DOF2--------->LBD16 ---->AGL15   --------->YAB1 ------>MYB46(1) ---------->ID1   ------------>CBF  ------->TEIL---------   atcaataagaaactattcatgatactggaccagcctgtttgaatcttgtcccatccacaaatctcccaatatataaataaagaaccttcacccgtaaaac  25034300                                                                                      --------->YAB1                                                                                      <---------ICU4                                                                                      --------->ATHB51                                                                                      <--------ATHB1                                                        <----------DOF2              --------->ICU4                           --------->ANAC58          <-----------GT1                 <---------ATHB51                           --------->ANAC46        --------->GLK1(1)       >>>>>>>>>RAP2.2                     <----------DOF2              <---------ARR14(2)     --------->ARR11(3) <--------                ---------->DOF2                   <---------GLK1(2)      <---------ARR11(3) <-------- ----->AtMYB61<---------------------WRI1          --------->ARR14(2)    --------->CCA1(1)  <---------ANAC58 ->DOF2  --------->MYB46(3)--------->ANAC58 <---------GLK1(1)           --------->RVE1(1)  <---------ANAC58   caaaaccatcaacaacttcaaagctttctaagcaagagattgagagaaatcggattttctttctaagactcaaaatatctaaaaacaataatggcttttt  25034400                                                                                  --------->ARR11(3)                                                                                  <---------ARR11(3)  --------->ZAT2                                                                ----------->HVH21  <---------ZAT2          --------->TOE2(3)                   <-----------GT1  --------->LBD16  --------->At4g35610     --------->YAB1               <---------YAB1         --------->ANAC55(2)  <---------At4g35610   <---------ARR14(2)            --------->KAN4(2)       --------->ANAC46 --DOF2                <---------CCA1(2)    --------->At5g28300              <---------LBD16      <-- -DAG2           ---------->DOF2        --------->MYB52(1)<---------YAB1   -------->P           <----   ggtctgctgagaatgctactaaagcctatcttagtacattgaaaacggtaagagtttattcttataaccaaaacatttacccgtgatattgtttcaaatt  25034500                                                                                   --------->DEAR3(1)                                                                                  <------NtERF2                                                                              <-----------HVH21                                                                             <---------O2                                                                             --------->ANAC46                                                              <------ZmHOX2a(1) --------->DEAR3(1)                                                             <----------ID1  --------->O2                                                        <------ZmHOX2a(2)  ------>MYB83                                                        =============HOX2a_HOX2a<---------DEAR3(1)                                                      <------ZmHOX2a(1)    ------>MYB46(1) -------YAB1       <-----------GT1                 <---------LBD16---------->DOF2------>NtERF2 -------GT1      <-----------HVH21            ------->TEIL---------->DOF2  --------->MYB52(1)   acgataaaagattagttaatgtcacattttgacatatttctctatatgcattttcaggatcaaaggacaaaagaaccaaacgtcgccgaattcatatcag  25034600                                                           ------>NtERF2                                                           <---------DDF1                                                           <---------RAP2.6(3)                                                          --------->RAP2.3(3)                                                          --------->DREB2C(2)         <------NtERF2                             <---------MYB52(2)        --------->LBD16                           --------->At4g35610       --------->LBD16                            <---------At4g35610       --------->RAP2.3(2)                     --------->At4g35610       --------->RAP2.6(2)                   <------NtERF2--------->At1g77200      <------NtERF2                        <---------DEAR3(1)                                       -      --------->ATERF1(1)                  --------->DEAR3(1)                                      --      --------->RAP2.3(1)                 <---------LBD16 --------->DEAR4(1)                       <-      <---------LBD16                     --------->ATERF1(1)                                     <--     <---------ATERF1(1)                  <------NtERF2   --------->DEAR3(1)                      >>>     ------>NtERF2                       <---------RAP2.3(1)                                      <--    --------->ATERF1(2)                  ------>NtERF2    <---------ETT(1)                    ------>MYB46(1)    --------->DEAR3(1)              <---------ANAC46   ------->GAMYB                          ------>MYB83    <---------ATERF1(2)             <---------ANAC58   --------->ANAC46                      --------    --------->ANAC46                <---------ANAC58  --------->MYB46(3)                   --------->MYB46(3)   --------->MYB46(3)           --------->LBD16<---------ZAT2                          <---------MYB52(2)   --------->RAP2.3(1)         <---------ANAC58<---------At4g35610                 <------NtERF2  <--   --------->ERF1              <---------ANAC58--------->ZAT2          <---------ZAT18--------->At4g35610   --------->DEAR3(2)      <---------GLK1(1)--------->LBD16----------->RAV1(1)     --------->At4g35610  <---------ATERF1(1) ---------->DOF2 <---------ATERF1(1)--------->RAP2.3(1)       <---------At4g35610   ccctagccgccggaaatagcgctagaaagatagccgtggcttgcgccggagcagcaaacgccgacatactcgttgcactaatcgcagcggctaaccaaac  25034700                      <---------ANAC58   --------->WRKY18(1)<---------ANAC58 -------->ALFIN1      <---------ANAC55(2) ----->MYC3           <---------ANAC46                                              <-------TEIL ------MYC3           <---------ANAC55(1)    <---------ARR14(2)                   <---------ARR14(2) -------ANAC46        --------->ANAC55(2)    --------->ARR14(2)                  --------->At4g35610 >>>>>CAMTA3        <-----------GT1         <---------CCA1(2)                 <---------At4g35610 -------ANAC58    <----------DOF2         --------->YAB1                   <-------TEIL           <-- ->MYB55(1)    <---------ANAC58           <---------ICU4          <-----------HVH21--------->CCA1(2) -------ANAC58 <---------ANAC58          <---------ATHB12       --------->MYB46(3)--------->ARR14(2)   gcgtggtcaagttgtatgcgttttacgtggtatcgaagaactaatcatatcccaaaaaatgttggaaccatcagagattcatcagatacaattcgtagtc  25034800  Previous    Next  AGI:  At5g62280.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49726.1); contains InterPro domain Protein of unknown function DUF1442 (InterPro:IPR009902) Range:  from: 25034299    to: 25035472    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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