Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ----------->GT1                                                                               --------->YAB1                                                                      --------->AHL20(2)                                                                     <---------AHL20(2)  <----------DOF2                        --------->At4g35610       --------->YAB1        --------->GLK1(2) <---------ANAC58                     ---------->DOF2          <---------ANAC55(2)---------->DOF2   < <---------ANAC58            <----------DOF2                  <-------TEIL<---------YAB1<---------GLK1(2)   tttgcttaaatggctcaaatttccaattgaactttgggctaaaagctgagataaatcacacaaatacataaataatatgaatagtaaagagaatcgttga  25021600                           <---------ARR14(2)                          <------ZmHOX2a(1)                       <------ZmHOX2a(1)                  ----------->HVH21                  --------->GLK1(1)                <---------ANAC58                    <---------GLK1(2)                <---------ANAC58                    <---------ARR14(2)                            ---                <---------ANAC55(2)     <------ZmHOX2a(1)                                <---------HSFB2a(2)                <---------ANAC55(1) --------->LBD16 --------->ARR14(2)             <-----------RAV1(2)   ------->TEIL --------->ANAC55(2)--------->HSFB2a(2)                       ---------->DOF2   ------ ---------YAB1  <---------ANAC46   <---------HSFB2a(2)                <---------LBD16 --------->AGP1   agatgaatgtgtgttcttacgtgaaggaggatagtttccagaggattgaaaccagatttcgatttcttcagtctcggaataaagctcaggtctagagaaa  25021700                                                                                   <---------HSFB2a(2)                                                                                   --------->HSFB2a(2)                                                                               --------->ARR11(1)                   <---------ARR14(2)         --------->YAB1                  --------->ATHB12                   --------->ARR14(2)         <---------ICU4                 <---------YAB1        <---------DEAR3(1)            --------------------->WRI1             --------->ICU4     -----   <---------GLK1(2)                 <---------ARR14(2)                    --------->YAB1     <------ ------>YAB1<-------TEIL   <---------ATHB12  <---------ATHB12         ------>ZmHOX2a(1)    --------->ICU4 --->GLK1(1)--------->ABI4(2)        --------->ARR14(2)            <---------YAB1 <---------LBD16   tcatagaacctcggtgcatcgaattcgaaatcaatatcgaattcgaaatcatcgccagaaaaactcattatcctcgatgatgattcgggaaccattatca  25021800                                                                                                    <                                                                                                    <                                                                                                  ---                           <---------ANAC46                                                      <xxx                  ------>ZmHOX2a(2)                                                            ------      --------->YAB1    ----------->HVH21                                                     <------     <---------YAB1   --------->At4g35610              --------->WOX13(1)                     <xxxxxx ------>ZmHOX2a(1)==============================HOX2a_HOX2a                                 ------>ZmHOX2a(1) =======================HOX2a_HOX2a         <---------ANAC58                               <xxxxxxxxx ========================HOX2a_HOX2a        <---------ANAC58                            <---------ALFIN1 ---->WOX13(1)   <------ZmHOX2a(2)       <------ZmHOX2a(1)                      ------>ZmHOX2a(1)<--- ---YAB1         ===============================HOX2a_HOX2a               ------>ZmHOX2a(1)<---------ALFIN1   atcctcgatgataactccgatctcagacgacgggaatcaagtaggagcgtttcacatcaatcgaatcgaaaatgtccttctccttctctccctcctcctc  25021900                   <---------ARR14(2)         <---------ALFIN1       ------>ZmHOX2a(1)      <---------ALFIN1           ----------->GT1    ------>ZmHOX2a(1)           <---------HSFB2a(2)   <---------ALFIN1--------->GLK1(2) ------>ZmHOX2a(1) --------->ARR14(2) ---------ALFIN1  <---------GLK1(2) xxxxxxxxxxxxxxxxsmallRNA(se3)  --------->HSFB2a(2) --->ZmHOX2a(1)--------->HSFB2a(2) xxxxxxxxxxxxxsmallRNA(se3)--------->GLK1(2) >ZmHOX2a(1)   <---------HSFB2a(2) ---ALFIN1------>ZmHOX2a(1)<---------ARR14(2) xxxxxxxxxxsmallRNA(se3)   <-----------ARR10                   <------ZmHOX2a(1)                 <--- xxxxxxxsmallRNA(se3)     <---------GLK1(2)  <-----------RAV1(2)                            *TSS ---- ------ALFIN1------>ZmHOX2a(1) <---------LBD16    <------ZmHOX2a(1)                   <---------At4g35610   ctcctcctcctcctcctcgagaatcggagaatctctggaaaaaatcgccagaggataagagcgaaggagagagagagagagaaattggagatgagagaag  25022000                                                                      <------NtERF2                                                                     ------>NtERF2                                                                     --------->LBD16                                                                     <---------LBD16                                                                    <---------ANAC58                                                                    <---------ANAC46     <---------At4g35610          <---------ANAC58                                     <-------GAMYB   --------->YAB1          <---------ANAC58                                     <---------At4g35610       --------->At4g35610      <---------DAG2                             ------->GAMYB --------->At4g35610--------->YAB1      <----------DOF2                           --------->MYB46(3)  <---------ANAC58 --------->YAB1 ------ARR11(3)<---------ZAT18                <---------DOF5.7(2)  <------NtERF2------------>CBF    < ----->ARR11(3)--------->ZAT18                --------->MYB52(1) <---------DEAR3(1)  --------->MYB52(1)   agctctaacttttcttgtggacaagaagagagagagagagagagaaggtaacggccctaaaattcagttggcgcggatgtataacaataacagctcatat  25022100                                                                                           <--------ATHB1                                                                                           --------->ATHB51                                                                                           <---------AHL20(2)               <------MYB83                                             --------->ANAC46   <---------ICU4              --------->MYB59                                         --------->AtMYB61    --------->AHL20(2)        <---------------AGL15                                        --------->MYB46(3)   --------->ICU4        --------------->AGL15                                <---------AHL20(2)           <---------ATHB51       --------->TOE2(3)                                   <---------AHL20(2)             <---------ATHB12    --------->ARR14(2)                                 --------->AHL20(2)            <---------At4g35610 -----------GT1<------MYB46(1)                         <---------AHL20(2)----------->RAV1(1)  <------   ttttagtattctcaatttggttcttcagttttctaaaatcacaaattagaccccaatttatatttttttgaaccacaacaccagttcatctaataattta  25022200                              <-------MYC2                              ------->MYC2                              <-------MYC4                              ------->MYC3                              <-------MYC3                   --------->AHL20(2)                   <---------AHL20(2)                   <---------AHL20(1)              --------->AHL20(2)                             --------->ANAC58              <---------ARR11(3)                             --------->ANAC58       ----------->GT1              --------->AHL20(1)               <---------MYB46(3)          <---------DAG2        ----  <----------DOF2 --------->AHL20(2)          <---------ARR14(2)           <----------DOF2       ---- ---AHL20(2)  <---------AHL20(1)              --------->ARR14(2)        <-----------GT1       <------   tgttctttagtttctatatattaaattttgcacatgttttctacttcggttcttggtattggcaagaattttagttactttactagatgtaaattcaaat  25022300                                                                         <---------ARR14(2)                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                 <---------ANAC46        <---------ARR11(1)                                                 <---------ANAC58        <-----------ARR10                                                 <---------ANAC58        ------->TEIL                                         --------->YAB1                  --------->ARR14(2)                                        <---------TOE2(3)                --------->GLK1(2)                                     <---------ATHB51                   <---------CCA1(2)                                     <---------AHL20(2)               <---------ANAC58                                  --------->AHL20(2)              ---------->DOF2     --------->CCA1(2)            --------->AHL20(1)          ----------->GT1    --------->AHL20(1)            <---------AHL20(2)        --------->ARR11(3)   --------->AHL20(2)            <---------AHL20(2)         <---------ARR11(3)      --------->YAB1 ----->TOE2(3)            ----------->GT1----------->GT1 <---------TOE2(3)     <------ZmHOX2a(1) ----->TOE1(3)       <---------AHL20(2) <---------YAB1  ---------->DOF2 <---------ARR14(1) ---CCA1(2)     <---------ZAT6   --------->AHL20(2) <---------MYB46(3)<---------ANAC58   cttaaatatatgaaaatagtgttttaatttgtgaattaaattatggtaatttcgtggttaaagatagttaaagcgtatctaggaaattagaatttgtttt  25022400                                                 <---------ANAC58                                                 <---------ANAC58                                                ---------->ID1                                          <---------AHL20(2)                                         <---------ARR11(3)                                         --------->AHL20(1)          <---------ZAT6            ------                                         <---------AHL20(1)          ----------->GT1           <-----                  <---------ANAC58       --------->ARR11(3)   <----------DOF2                  ------                  <---------ANAC58      --------->CCA1(2)  <---------ARR11(3)             --------->ANAC58                 ---------->ID1        --------->ARR11(3)  --------->ARR11(3)             --------->ANAC58  --------->HSFB2a(2)   ------->GAMYB  <---------ARR11(3) <---------CCA1(2)     <---------ICU4 <-----   tcttctataatttcaacttgtcgtaacgctcttaaatatgagatatatttggcgcatcatatatctttctattgttaaaaaaacatgacaacaagaaaat  25022500  Previous    Next  AGI:  At5g62240.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63610.1) Range:  from: 25019584    to: 25021992    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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