Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                            ------>MYB46(1)                                                                                            ------>MYB83          --------->CCA1(2)                                                               <---------MYB59         <---------ARR14(2)                                                            <-----------GT1         --------->ARR14(2)                                                         <---------ZAT6    --------->GLK1(2)                                            --------->YAB1 ---------->DOF2------   acgaagaatcagatatgtgcgaaaacagatgtgtattttggaatgaaacattcaattggaaccctaagcataatcgataaaccaaagtgttaccaaatca  25002500                                                                                               ------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                           <---------ANAC46                                                                                          <---------LBD16                                                                                         ------>ZmHOX2a(2)                                                                                    ------>ZmHOX2a(2)                                 --------->At4g35610                              <---------ARR14(2)                       <---------ARR11(3)                                         --------->ARR14(2)                       --------->ARR11(3)               --------->TOE2(3)         <-----------ARR10                       <-----------ARR10       ----------->RAV1(2)            <---------At4g35610 --- ---ATHB12            <---------GLK1(2) --------->GLK1(1)        --------->DEAR3(1)<---------At4g35610 --->YAB1          --------->YAB1<---------At4g35610   <---------YAB1 ---------->DOF2----------->HVH21   aaatcaaatgttctgaagaaatcaaaatctcactcagcgaagaaatctaacctggttaccatagccatcgccgaaagcgacgctgatctgatcgcgcgtg  25002600 --->ALFIN1                                                                        --------->ANAC46 -MYC3                                                                             --------->ANAC58 >MYC3                                                                             --------->ANAC58 -MYC2                                                                         <-----------GT1 >MYC2                                --------->ANAC58                     <---------AHL20(2)      -- --ANAC58                             --------->ANAC58                   <---------AHL20(2) --------- --ANAC58            --------->HSFB2a(2)            --------->LBD16      --------->AHL20(2)--------->ANAC58 --ANAC46            <---------HSFB2a(2)    --------->ANAC58           --------->CCA1(2)   --------->ANAC58 ---->TEIL--------->MYB52(1)<---------YAB1  --------->ANAC58          <---------ARR11(3)   --------->ANAC46   tacctagtcgacgaacagctcgtcgagatgatcactgtgtaagcacaagtattccccaatttctgcatcatagatataaatttacacgcatacaaggaaa  25002700                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                   <-                --------->DAG2                                                               --------            --------->LBD16                                                                <---------WOX13(1)           --------->HSFB2a(2)                                       --------->GLK1(2)--------->TOE2(3)           <---------HSFB2a(2)                                  --------->CCA1(2)   <---------TOE2(3)          <---------LBD16   ---------->DOF2          <---------LBD16 ------->TEIL   <---------TOE1(3) ------->YAB1  ---------->DOF2         <---------TOE2(3)       <----------ID1      <---------DOF5.7(2) -->GT1  <---------LBD16 --------->ANAC46 ---------->DOF2---------->DOF2           --------->MYB52(1)   atcataagtttctcgggaaaagtttctacccaaagacgatgaaggaaagttcaaacggggaaagagagacgaacctggatgaggctaacgttgaatgatt  25002800              <------ZmHOX2a(2)             --------->ARR14(2)                                                             ------>NtERF2             <---------ARR14(2)                                                            --------->ANAC46            <------ZmHOX2a(1)                                                              --------->RAP2.6(2)         <------ZmHOX2a(1)                                                                 --------->ANAC58     --------->ALFIN1                                                                      --------->ANAC58   --------->bZIP60(2)                                                                    --------->SPL7   <---------TGA1a                                                                      <---------SPL7   ==============================bZIP_DOF                                              --------->ANAC58   <---------bZIP60(1)                                                                 --------->DEAR3(2)   --------->O2                                                                        --------->ANAC58   <---------O2------>ZmHOX2a(2)                                                      --------->SPL7   --------->TGA1a                                                                    --------->SPL1(2)   <---------ANAC46                                                                  <---------SPL1(1)   --------->bZIP60(1)                                                               --------->SPL1(1) -------->DEAR3(1)                                                                  <---------SPL7  < ---------->HVH21                                                                  <---------ANAC58 < ------->At4g35610       <---------YAB1         <---------AHL20(2)                <---------------AtSPL3 --------At4g35610    <----------DOF2      ----------->GT1          ---------->DOF2<---------ANAC58 < ->ATHB12=============HOX2a_HOX2a         --------->ALFIN1    <------ZmHOX2a(1)  <------------------SPL14   cagcgacgtgaggaggatccaatacttttgattcgtaaacagaggtggatataatgaagacgaaggagattaaagtgaagaagagtcgtacggacgccat  25002900                         --------->CCA1(2)        --------->HSFC1(1)           *TSS                                                <-----------GT1        <---------HSFC1(1)<-------TEIL                                               <------ZmHOX2a(1)        <---------HSFB2a(2)    --------->ANAC58                        --------->HSFB2a(2)   --------        --------->HSFB2a(2)    --------->ANAC58       <------------CBF <---------HSFB2a(2) <---------LBD16 ---------ANAC58        --------->ARR14(2)    ---------->DOF2     --------->DAG2   <---------TOE2(3) ---------ANAC58        <---------ARR14(2)  --------->ANAC58     ---------->DOF2   <---------TOE1(3) ---------ANAC46      <---------TOE1(2)     --------->ANAC58   --------->ARR11(3)  <---------ANAC46   tttcgtgcttcgagaaatcgctcgcagatacacaagcgaagagaaaacgaaagagtaattgagaagataaagtctcgaaccagttgaggataaaccggat  25003000                                                            <------NtERF2                                                           ------>NtERF2                                                          --------->ANAC58                                                          --------->ANAC58                                                         ------>NtERF2                                                        --------->DEAR3(1)                                                       --------->ATERF1(1)                                                       <------NtERF2                                                      ------>NtERF2                                                      <---------ATERF1(1)                                                     <---------DEAR3(1)--------->ANAC58                                                     <---------RAP2.3(2)  ----------->RAV1(1)                                                     <---------RAP2.3(3) <---------ZAT18            <                                               <---------AHL20(2)      --------->ANAC46            --     <-----------HVH21                        <---------AHL20(2)       --------->ANAC58           <--   --------->LBD16                            --------->AHL20(2)   <-----------GT1               ---- <---------LBD16                   --------->YAB1   <---------------------WRI1        <-----------HVH21 ->LBD16              ------------>CBF   ----------->GT1<---------ATERF1(1) <---------ALFIN1  -------   tagaccgggtcaaattcaaacaaattcaatttcggtataagaactgaaataaatggcgacgcgcccaagttacaggccacacatctcttgtcagtgtcat  25003100                                                                     --------->ZAT6                                                                   ------->TEIL                                                                --------->ANAC58    --------->MYB59        <---------TOE2(3)                    <---------ANAC55(2)                <-    <---------TOE2(3)    <---------AHL20(2)                     --------->ANAC58                  --- ---------ICU4           --------->AHL20(2)               <-------TEIL                          <---- ------->ICU4           --------->ICU4                   --------->CCA1(2)<------MYB46(1)<---------HSFB2a(2) -------AHL20(1)        <---------YAB1          --------->ATHB12--------->ANAC55(1)      <---------HSFC1(1) ----->YAB1        ----------->GT1         --------->ARR11(3)   --------->ANAC55(2) <----------DOF2-- -->YAB1    <------ZmHOX2a(1)    <---------ANAC46       --------->ARR11(1)<------MYB83   --------->HSFB2a(2)   aatatttaggtagaggagaaaatgtaattaatgttttgtatagaagaaattgattagagattcgacatgtaactgtaggttatgtgcttttctagatgat  25003200                   <---------TOE1(3)               <---------DAG2         <-----------GT1       <---------MYB52(2)      --------->ANAC55(2)      <---------ANAC55(2)                                                  <---------AHL20(2)       <      --------->ANAC58                                                     <---------AHL20(1)  <-----      --------->ANAC58                                                     --------->AHL20(2) <------ --------------AGL15                                                      --------->AHL20(2)--------- ------>TOE2(3)<----------DOF2                  <---------ATHB12     --------->YAB1       ------->TEIL -----YAB1 --------->MYB46(3)  --------->AHL20(2)<---------ICU4 <---------ZAT14        <---------ANAC55(2) ------------->AGL15  <----------DOF2 <---------ANAC46          --------->ZAT18        --------->ANAC55(2)   tcttaatcaagtaaccactttaagctttgaaaaaaaaatgttgtatacaaatcaatacaaaacttgcacactgatattaaatttttgtcatgtatcatca  25003300       ----------->RAV1(1)     ------>MYB46(1)     ------>MYB83 <---------At5g28300                             <---------ARR11(3) -----------GT1                            <-----------GT1                       ---------->DOF2 ----ICU4   <---------GLK1(2)        --------->AHL20(2)                     --------->AHL20(2) ---YAB1 --------->ANAC46          ----------->GT1                       --------->YAB1             < >YAB1--------->MYB46(3)    --------->AtLEC2     --------->ARR11(3)     <---------YAB1              -   ttttaccatccacagaaactgaatgtgatcatgcactaagtaaatttacaacatcttgatatactggaatttctataataaactaaagtcaacattttag  25003400  Previous    Next  AGI:  At5g62200.1    Description:  embryo-specific protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G41475.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49764.1); contains InterPro domain Embryo-specific 3 (InterPro:IPR010417); contains InterPro domain Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976) Range:  from: 25001462    to: 25002937    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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