Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------MYB52(1)                                                                                   --------->LBD16                                                                                  --------->ATERF1(2)                                                                                  <---------ATERF1(2)                                                                                 <------NtERF2                                                                                --------->ABI4(1)                                                                                ------>NtERF2                                                                                <---------ATERF1(1)                                                                               --------->RAP2.3(2)                                                                               <---------ATERF1(2)                                                                               --------->DEAR3(1)                                                                               <---------DEAR3(1)                                                                               --------->RAP2.3(3)                                                                              --------->RAP2.6(1)                                                                              --------->ORA47(2)                                                                              --------->ATERF1(1)                                                                              --------->RAP2.3(1)                                                                              --------->ERF1                                    <---------TOE1(2)                        <---------ATERF1(1)                                    <---------TOE2(2)                        <---------RAP2.3(1)                                   <------NtERF2                            --------->ANAC46                --------->CCA1(2)<---------DEAR3(1)                   <-----------HVH21             ----------->ARR10 <-----------HVH21                     <---------ETT(2)         <---------ANAC58  --------->YAB1              <---------ALFIN1     --------->ANAC58         <---------ANAC46 <---------ATHB12             --------->ANAC46     --------->ANAC58         <---------ANAC58--------->ANAC46              --------->ANAC58    --------->SPL7   <---------GLK1(1)  ------>ZmHOX2a(2)                --------->ANAC58  <---------SPL7         <----   ttgagaaatcggcgtgagatttgatccactcatcgtcggaggttttaatccaatccaacgcctcaactccgtcgtcatacgccgccggtaatcgatgctc  24996700                                                     --------->TOE1(1)                                                    <---------LBD16                                                  --------->ZAT2                             <-------                                 <-------GAMYB    <---------ZAT2                           <---------                                 ===========================MYC_MYB                       <---------At4g35610                                <---------ANAC46  --------->O2                            <---------ZAT14                      <-------TEIL                <---------O2                            <---------ZAT2                     --------->CCA1(2)            --------->TGA1a                         --------->At4g35610                     --------->ARR14(1)        --------->MYB46(3)                         --------->ZAT2                    <---------ARR14(2)       --------->ANAC58                             --------->ZAT14                    --------->ARR14(2)       --------->ANAC58                          --------->At4g35610                   <---------GLK1(1)         --------->ANAC46                         <---------DEAR3(1)                  ----------->ARR10     <------ZmHOX2a(2)                             --------->ANAC46                 ==============================HOX2a_HOX2a                       <-----------ARR10                 <------ZmHOX2a(1)     --------->ARR11(3)--------->At4g35610  <---------ANAC58         <---------SPL7         <---------ANAC58 ------>NtERF2--------->GLK1(1)  --------->ARR14(2) <---------At4g35610--------->ARR11(1)<---------At4g35610<---------At4g35610  <---------ANAC58  <---- -----LBD16--------->SPL7       <---------ANAC58<---------ALFIN1  <---------LBD16<---------ARR14(2)   tggagctaatcggtacgaaggagatacgacgatggcgttgagatcacgagccacctcggagcagaaatcgtggaagagttgcatatcgacgctgcagagg  24996800                                                                        <------ZmHOX2a(1)                                                                     <------NtERF2                                                                     --------->ATERF1(1)                                                                   <---------DEAR3(1)                                                                   <---------ANAC46                                                                  --------->ATERF1(1)                                                                  <---------LBD16                                                                  <------NtERF2                                                                 ------>NtERF2                                                                 <---------RAP2.3(1)                                                                 <---------ERF1                                                                 <---------RRTF1(1)        --------->LBD16                                         <---------RRTF1(2)        ------>NtERF2                                           <---------RAP2.6(2)       --------->ANAC58                                         <---------RAP2.3(2)       --------->ANAC46                                         <---------ATERF1(2)       --------->ANAC58                                         --------->ATERF1(2)               ---       --------->DEAR3(1)                                       <---------RRTF1(3)                ---      <---------LBD16                              --------->DOF5.7(2)--------->ALFIN1            ---     ------>ZmHOX2a(1)            --------->HSFB2a(1)           <---------DEAR3(1)               ---- <---------ARR14(2)               --------->HSFC1(2)            <---------RAP2.3(3)             <---- ------->TEIL          <<<<<<<<<<<<<<<<<LFY --------->ANAC58  <---------DOF5.7(2)               ----- --------->ARR14(2)   --------->ANAC46      --------->ANAC58 --------->WRKY38(1)             <------- --At4g35610        --------->ANAC46--------->GLK1(2)        --------->WRKY12  <------MYB46(1) <----- --RAV1(2)   --------->YAB1       <---------HSFC1(2)         ----------->HVH21<---------AtMYB61------ --ZmHOX2a(1)----------->GT1      <---------HSFB2a(1)       --------->DOF5.7(2)<------MYB83------>NtERF2   atgaatcctccgccatggtaatacacaacaatggggagtttctgagacgaaacgttaccctcgttgacggcggaggagggaaggtagagacggagccacg  24996900                                       <---------ANAC46                        ------>ZmHOX2a(2)                      <---------ARR14(2)                                   <---------ANAC46    <---------YAB1    <---------ARR11(3)                              <---------ANAC46    <---------AHL20(2)--------->ARR11(3)                             <---------DEAR3(1)  --------------->AGL15 =====================================HOX2a_HOX2a  <-----------RAV1(2)  <---------------AGL15<---------RVE1(1)                            <---------LBD16  <----------DOF2     <---------AGP1  <------NtERF2              --------->ZAT2 <-----------------AGL3<------ZmHOX2a(2)                         <---------ZAT2 ------>WRKY12        <---------ARR14(3)                         <---------At4g35610 ------>WRKY45        --------->ARR14(2)                         --------->At4g35610 ------>WRKY38(1)     --------->ARR14(3)                     --------->ALFIN1 ----->DOF5.7(2)    ----------->ARR10------>NtERF2         --------->At4g35610                      - ---MYC3     <---------DOF5.7(2)     --------->LBD16     <-----------RAV1(2)          <---------ANAC46 -->MYC3     --------->MYB52(1)     <---------ANAC46    <------ZmHOX2a(2)--------->ZAT14       <----- --ALFIN1   <---------WRKY38(1)     <---------DEAR3(1) <-----------HVH21 <---------ZAT14      <------NtERF2 ----O2    --------->DOF5.7(2)     <---------LBD16    <------ZmHOX2a(1) --------->ALFIN1 <---------AtMYB61 --->O2<---------WOX13(1)<----------DOF2    <---------ANAC46 <---------REM1(1)       --------->At4g35610   ttgactttaattggttaacgggaagatcttttgaaacggcggggtttagtggggaaggatcaggtgtagctgcggtgcaggggaagttgctgaggtcgcg  24997000                                              <------ZmHOX2a(2)                                             <---------ARR14(2)                                      --------->YAB1                                  --------->CCA1(2)          ----------->RAV1(2)  <---------TOE2(3)       --------->MYB46(3)      <---------TOE1(3)   --------->ATHB12     <-----------GT1           <---------YAB1--------->ARR14(2)  <---------WOX13(1)  <---------TOE2(3)     <------ZmHOX2a(1) -------->ATHB12     <-----------GT1--------->ANAC58                                     <----------DOF2 ----ANAC46      --------->AHL20(2) --------->ANAC58                     <---------AHL20(2)     <----   agtgattgaaccatctggattatttacgatgttaagataagcataaggatcagcgattggacttggttcggacatttttttggtttttggtctttttgga  24997100                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                       ----------->TBP                                             <-                                       --------->AHL20(2)                                      ------                                       <---------AHL20(2)         <---------YAB1               ------                                     ----------->TBP            <---------AHL20(2)             ------                                   <-----------TBP              --------->AHL20(2)             ------                                 <---------DAG2                <---------AHL20(2)           <-------TEIL                                 <----------DOF2          <------ZmHOX2a(1)               <---------ARR14(2)                      ---------->TaMYB80                 ----------->GT1          --------->CCA1(2)<-                      <---------ARR14(2)           --------->TOE1(2)    <---------TOE2(3) --------->ARR14(2) -----GLK1(2)         --------->ARR14(2)           --------->TOE2(2)   ---------->DOF2   --------->At4g35610   ttctaatgtgtgcatcagaactcgaatatgctacgctttatataaatccaaaaccagcgaggaaaattatttttaaagtaagagatttggcagattcaag  24997200        <---------AHL20(2)       --------->AHL20(2)  --------->TOE2(3) ---------ARR11(3) -------->GLK1(2)                                                       ------>ZmHOX2a(2) ---------ARR14(2)                                                     <------ZmHOX2a(2) -------->ARR14(2)                                                    <---------ARR14(2) -----------ARR10                                                     <---------ARR11(3) -------->ARR11(3)                                                    --------->AGP1 --------ARR14(1)                                                     --------->ARR14(2) --->ANAC58                                                           --------->ARR11(3) --->ANAC58                                                          --------->GLK1(1) --->AtLEC2                                                   --------->GLK1(1)--------->HSFB2a(2) --->ANAC46                                                   <---------GLK1(1)<---------HSFB2a(2) --------CCA1(2)                         <-----------GT1 <----------ID1--------->CCA1(2)            <   caaatcttatttaatcccattaacttagtcaaaaactttgtattaactcatcaccaaaaacgagaaatctgagatctactactagaatggtagtcaaaaa  24997300                                                                                          <-------GAMYB                    <---------ARR11(3)                                                   <---------MYB46(3)                    --------->AHL20(1)                                                   <-----------RAV1(1)                    --------->ARR11(3)                                         <---------HSFB2a(2)                --------->ARR11(3)                                          --------->GLK1(2)                <---------ARR11(3)                                         <---------GLK1(2)       --      <---------ARR14(2)                     --------->MYB52(1)      --------->GLK1(2) <---------At4g35610      --------->ARR14(2)       <-------TEIL ----------->HVH21    --------->TOE2(3)   <--------P  ---- ---------TOE2(3)--------->CCA1(2)  ---------->DOF2         ------>ZmHOX2a(1)  --------->HSFB2a(2) --   ctaaggcaaatatgtcaagatatatattcttggttcataaaagtcgctaacaggtctctgtcctaaacgataatctagattctagaggttgctgttggca  24997400                                              <---------At4g35610                                         --------->DAG2                                       ---------->DOF2                                      <------ZmHOX2a(1)                                   <---------LBD16    --------->WOX13(1) ------->ANAC58                    --------------->AGL15                              <---------ZAT6 ------>DOF2                      ----------------->AGL1 <---------AHL20(2)           ----------->GT1 ------->ANAC58                   <-----------------AGL1 --------->AHL20(2) <---------ATHB12   <-----   aaagccaaaactaatttgaagtttgacgactcatttaccaggaaaggtagccgattcaattaaacagacgaatagcaaatcaattctagtgttaaaaacg  24997500                                                                          --------->MYB46(3)                                                                      <---------YAB1                                                                    <---------ICU4                                                                   --------->ICU4                                                                 <--------HAHB4                                                                 --------->YAB1                                                                 <---------ICU4                                                                <---------YAB1                                                              --------->YAB1                                                              <---------ICU4                                                          --------->AHL20(2)                                                     <---------YAB1<---------YAB1     ---------->DOF2                            ----------->GT1 --------->ICU4  --------->TOE1(3)                       ----------->TGA1<---------AHL20(2)  --------->TOE2(3)                       ----------->HVH21  <---------ATHB12        --------->ANAC46 ----------->RAV1(2)                   --------->ATHB12  --------->AHL20(2)   <---------ICU4 -----ID1     <---------WOX13(1)      <---------ATHB12   <---------AHL20(2) ----------->RAV1(1)   acaacctgaaagatggattgaaacttacaaaacaattccaatgagtgacgaagttataatttaatcatcattatcatccaacattacacaaaattgataa  24997600  Previous    Next  AGI:  At5g62180.1    Description:  ATCXE20 (ARABIDOPSIS THALIANA CARBOXYESTERASE 20); carboxylesterase. similar to hydrolase [Arabidopsis thaliana] (TAIR:AT2G45600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46584.1); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) Range:  from: 24996070    to: 24997075    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g62190.1    Description:  PRH75 (plant RNA helicase 75); ATP-dependent helicase. Identical to DEAD-box ATP-dependent RNA helicase 7 (RH7) [Arabidopsis Thaliana] (GB:Q39189;GB:Q94BX7;GB:Q9LVB7); similar to EMB1138 (EMBRYO DEFECTIVE 1138), ATP binding / ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT5G26742.2); similar to EMB1138 (EMBRYO DEFECTIVE 1138), ATP binding / ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT5G26742.1); similar to RNA helicase [Vigna radiata] (GB:AAF40306.1); similar to DEAD/DEAH box helicase family protein [Oryza brachyantha] (GB:ABG73436.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49765.1); contains InterPro dom Range:  from: 24997494    to: 25001199    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version