Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->ARR14(2)                                                               <---------GLK1(2)                <----                                                               <---------ARR14(2)              ------                                                            --------->LBD16                  <-------                                                           <---------LBD16               --------->ARR11(3)                                                           <---------HSFB2a(2)           <-----------ARR10                <---------ANAC58               <---------KAN4(2)       <---------WOX13(1)--------->ARR14(2)                <---------ANAC58            <------ZmHOX2a(1)--------->LBD16             <---------ARR14(2)             <---------GLK1(1)        <---------ARR14(2) ------>MYB83  <--------P<---------ANAC58             --------->GLK1(1)        --------->ARR14(2) -------->P   <-------GAMYB      <---------ARR11(3)           <------ZmHOX2a(1)         <------ZmHOX2a(1)   ------>MYB46(1)         <---------ANAC46 ---------TOE2(3)      --------->MYB52(1) <---------TOE2(3)--------->HSFB2a(2)   <---------ANAC58 -ZmHOX2a(1)<---------ARR14(2)--------->MYB52(1)    <-----------GT1  <---------MYB46(3)  --------->GLK1(2)   ttatggaaacagaggatttcttgactaacaaaaaacagaggatttaggaaatattcaccttcccggattcttggttgatagttccttggaaaatctccgg  24972200                                         --------->HSFC1(2)  --------->GLK1(1)           ---------->DOF2<---------ANAC46 <---------ARR11(3)    <------NtERF2     <---------HSFC1(2)<---------ZAT6                       ----- --------->ARR11(3)   ------>NtERF2      --------->HSFB2a(1)                          <xxxxxxxxxxxxxx -------HVH21   --------->MYB52(1)       <---------HSFB2a(1)                         <xxxxxxxxxxxxxxx --->LBD16  --------->HSFB2a(2)     --------->LBD16    <---------ANAC58             ----------->RAV1(1) --LBD16    <---------HSFB2a(2)<---------GLK1(1)       <---------ANAC58   ---------->DOF2     <------   tgagatatcgatttttagaaacggtggcaatggaaagccgagaaacttcgtggtttggctagtgagagaaggaatataaagagtggccacattgaaacaa  24972300                                                         --------->At4g35610                                                        ----------->RAV1(1)                                                        ------>NtERF2                                                     --------->LBD16                                                     ------>NtERF2                                                    --------->ATERF1(2)                                                    --------->HSFB2a(2)                                                    <---------ETT(1)                                                    <---------HSFB2a(2)                                                    <---------ATERF1(2)                                                   <---------LBD16                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                                <-------GAMYB                                   <----                                                --------->ATERF1(1)                           -------                                              <---------DEAR3(1)                              <------                                              <---------RAP2.6(2)                             -------                                            ------------>AtMYB77<---------ALFIN1              <------                                         <---------ANAC58<---------At4g35610                 <------- ---->MYB52(1)                           <---------ANAC58<------NtERF2                  <---------LBD16 xxxxxsmallRNA(le3)              <------NtERF2<---------DREB2C(2)              <---------ARR14(2) xxxxxsmallRNA(le3)            <---------ANAC46<---------MYB46(3)        <------ZmHOX2a(1)   -------- ---MYB52(2)                <-----------RAV1(1)<---------DEAR3(2)------>NtERF2 --------->ARR14(2)   acagacaattcagagtttgatgctctgtttttgtcgtcgattttcttggcggttccggcaccagagccacctagaggagagtattcgaaatcgggatatc  24972400                                                                          <------MYB83                                                                     <-----------RAV1(1)                                                                     <---------ANAC46         --------->ZAT2                                          <---------ZAT14 --------->At4g35610                                             --------->ZAT14 <---------At4g35610                                            --------->ALFIN1 <---------GLK1(1)                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -----LBD16                                <---------ZAT14  <---------At4g35610 -->ARR14(2)                               --------->ZAT14  --------->ZAT2<---------ANAC46 ---ARR14(2)                        ----------->HVH21       <---------ZAT2<------MYB46(1) -->ARR11(3)                      <---------At4g35610       --------->At4g35610 ---ARR11(3)                      --------->At4g35610      --------->GLK1(2) --GLK1(1)    ----------->RAV1(2) <---------ZAT2      <---------ANAC46  <---------ANAC46 ->GLK1(1)   -------->P           --------->ZAT2   --------->ALFIN1<---------ANAC46   tggagatgccaagcttacctgttccaatagtcttgaagctgacactgtagagagtgttgggaagctgtgttgtgttgggttttgggtttagggaatttga  24972500                                   <---------ARR14(2)                                   --------->ARR14(2)                                   --------->ARR11(3)                                   ------->TEIL                                  <---------CCA1(2)                               <---------TOE2(3)                               <XXXXXXXXXXXXXXXXXXXXMIR825                     <---------GLK1(1)           <------MYB46(1) <-------GAMYB            <---------YAB1                 <---------YAB1           <------MYB83   <---------MYB46(3)   --------->ARR14(2)            ----------->GT1      --------->ATHB12   <---------TOE2(3)     <---------ARR14(2)        ---------->DOF2  <---------REM1(1)   aattagtttgatttggttttgggatttgtggttaatgtatcttcttggggatttgtaattgtagattgttgttgttaaagagtttatttttgttgaagcc  24972600                                                         <---------WOX13(1)                                                        <------------CBF                          --------->YAB1               --------->ATHB12                  <---------AHL20(2)                         <---------YAB1               <---------YAB1            <-----------TGA1                    --------->YAB1               <---------ICU4         <---------ARR11(3)        <--                  <------------CBF               <--------HAHB4         --------->ARR11(3)        <--              <-----------GT1                    --------->YAB1---------->DOF2 --------->YAB1<-------           *TSS------------>CBF                 <---------ATHB12   --------->YAB1  ------------>CBF   atgtttctctcactattaacaattgttatgatgtttttggtttgttttgaatcattttgattgaagaaagcataaatcttatcgtcacaatttttatgtg  24972700                                                                                       --------->TOE1(3)                                                                                       --------->TOE2(3)                                                                                     <---------TOE2(3)                                     <---------ANAC46                               --------->MYB52(1)                                     <---------ANAC58                               <-----------GT1        <---------TOE2(3)            <---------ANAC58                               <---------DOF5.7(2) -------ANAC58                <-----------GT1              <---------ZAT18        <---------MYB52(2) -------ANAC58             --------->GLK1(2)         ------->TEIL           ----------->GT1 --------- ----RAV1(1)<-------TEIL  <---------GLK1(2)   <---------YAB1 <---------REM1(2)  --------->WOX13(1) >>   gctagtttctaatgttcattcaccttgagattctacatttcttggaatatcaatgtatttgtgtacatgggctcaatagggtcaattaacgtcaaaaaga  24972800                                                                                      <---------ANAC58                                                                                      <---------ANAC46                                                                                     --------->MYB52(2)                                                                                     --------->ATHB12                                                                                     <---------MYB46(3)                                                                                     --------->MYB55(2)                                                                                    --------->MYB111(1)                                                                                    <---------AtMYB61                                                                                    <---------MYB46(3)                                                                                  <---------ANAC58                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                                  <-------GAMYB                                                                                 --------->MYB55(2)                                                                                 <---------MYB46(3)                                                                                <---------TOE2(2)                                                                             ========================                                                                             =============MYC_MYB                                                                             ===============MYC_MYB                                                                             --------->O2                                                                             ===============MYC_MYB                                                                             <---------O2                                                                             =============MYC_MYB                                                                             --------->TGA1a                                                                             <---------TGA1a                                                                        --------->ZAT14  <------MYB83                                                                        --------->WRKY38(1)                                                                        --------->WRKY12 <------MYB46(1)                                                                        <---------ZAT18<--------P                                                                 <---------MYB46(3)<--------P -------                   <---------WRKY12                             --------->ALFIN1<---------TOE1(2)                   <---------WRKY38(1)                   <-------MYC3<---------ANAC58<---------DEAR3(2)                  <<<<<<<<<<WRKY6                        ------->MYC3<---------ANAC58<------MYB46(1)           --------->GLK1(2)                      <---------ARR11(3) <---------ANAC46<------MYB83  >>>>>>>>>TBF1   <<<<<<<<<<WRKY11                --------->ARR11(3)<---------DEAR3(1)<-------GAMYB ->DOF2    --------->ICU4     <-----------GT1    --------->CCA1(1) <---------PCF2<---------DEAR3(2) >>>>>>>TBF1     <-----------HVH21               --------->RVE1(1)----------->TCP11(1)<---------ANAC58   agaagaagaagagattatgggtcaactacattttactcatttttgggctaaatatctcacatgctggtgggccgtggactcgtgggttggttggacaaaa  24972900                                                                     --------->AHL20(2)                                                                     <---------AHL20(2)                                                                     --------->AHL20(1)                                                                     <---------AHL20(1)                                                                    <---------ATHB12                                                               --------->TOE2(3)            <--------  --------->AHL20(2)     <---------STY1(2)                   ------>NtERF2 <---------YAB1<---------ICU4 ====bZIP_DOF            --------->STY1(2)                  <---------ALFIN1       ------>ZmHOX2a(1) --->DOF2           --------->ZAT6                     ------->TEIL --------->AHL20(2)  --------->AHL20(2)   gtcataaaataaaacttctctaaaactagctacagtactacatttacaaagtttttgaacccccacctcaataaatttttatttcctccatttattaccc  24973000                                       ----------->GT1                                      --------->LBD16                                            <---    --------->TOE1(3)                <---------LBD16                                   --------->YAB1    --------->TOE2(3)               <---------LBD16                          <------MYB46(1)--------- <-----------GT1            --------->AHL20(2) --------->YAB1                <------MYB83  <---------TOE2(3) ---GT1       ---------->DOF2     <-----------GT1   <----------DOF2         --------->MYB59<---------TOE1(3)   atgtaaccttcatccacaaagtcaaactcataaatttatccgggtaaaattatacttttgagagtgatatgttagaatttggtagtgaattataaggtta  24973100  Previous    Next  AGI:  At5g62140.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK94834.1) Range:  from: 24971732    to: 24972611    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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