Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <-------TEIL                                                     --------->CCA1(2)                                                     --------->ARR14(1)                                                     --------->GLK1(2)                                                    <---------GLK1(2)                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                                    --------->ARR11(1)                                                  ----------->ARR10                                              --------->ANAC58                                              --------->ANAC58                   --------->ARR14(2)      xxxxxxxxxxxxxxxx>smallRNA(s)                         -----         --------->ANAC58                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <xxxxxxxxxxxxxxx         --------->ANAC46     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)               ------>ZmHOX2a(2)         --------->ANAC58   <----------DOF2<------NtERF2              --------->TOE2(3)       <------       <-----------GT1----------->HVH21    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <-------TEIL <------ ------>DOF2       <---------ARR14(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <------ZmHOX2a(2) -----AHL20(2)     --------->GLK1(2)      ------>NtERF2      <---------MYB46(3)--------->ARR14(2) --------AGL15    <---------GLK1(1)      ----------->HVH21   --------->MYB52(2)<---------ARR14(2) ------->AGL15    --------->GLK1(1)      <----------ID1     <-------TEIL       ------->TEIL   <------   aaaggcaatacacccctcgaaaatccgacgctttctctcataggcgacaagttagattcgggttcgttcaaaccatagatggatccatcgtacatggagt  24962900        --------->ICU4                         <-----------------AGL1 ---->ALFIN1                                   ----------------->AGL1                    --------->ICU4 xxxxxxxxsmallRNA(si3)                        <-----------------AGL1      <---------MYB52(1) ---ANAC58                                   <-----------GT1              ------>ZmHOX2a(1)  -------- ---ANAC58        ---------->DOF2<---------WRKY18(1)                     --------->TOE2(3)  <-------- ---ANAC46 <---------YAB1      <---------WOX13(1)                     <-----------GT1   <---------ARR11(3)   ggatagagtcattgttattcaaaaggaggctagattgaccaagagtatcaccaatttgggacttaaacaaattttccttagttagaccgagataattata  24963000                                                              <---------DEAR3(1)                                                              <---------RAP2.6(2)              <-----------RAV1(1)                            --------->DDF1              <---------REM1(1)                 <----------DOF2        ----------->HVH21             <---------TOE2(3)                 <---------ANAC58   <----------DOF2          <--------P                   <---------GLK1(1)     --------->RAP2.6(3) ->YAB1  <-------GAMYB                 --------->GLK1(1)   <-----------RAV1(1)   --------->TOE1(3) -YAB1<---------ANAC46        ---------->DOF2  <---------ANAC58 <------NtERF2    --------->TOE2(3)   cgagcattgtgggttgatgttgctagatgattcaaagttggatttcatggctttttttgatatgtcggcttttgtgacattaaccttaaaccttctcatg  24963100                                                                   --------->AHL20(1)                                                                   <---------ARR11(3)                                                                   --------->ARR11(3)                                                                   --------->AHL20(2)                                                                   <---------AHL20(1)                                                                  --------->CCA1(2)                       <---------WRKY45                    <---------REM1(1)                       <---------WRKY12              <-----------RAV1(1)                       <---------WRKY38(1)          <---------TOE2(3)                      <<<<<<<<<<WRKY11            <---------AHL20(2)                      <<<<<<<<<<WRKY6         <---------AHL20(2) --------->ARR11(3)     --------->YAB1            <---------ANAC46            <-----------HVH21 <---------TOE2(3) ----------->RAV1(1)   <--    ------>ZmHOX2a(1) --------->WRKY18(1)    <---------AHL20(1)  <---------ARR11(3)    --------->ICU4   tgtttcctatacttctgtgtaatggtcaacaattccaatattcgtcatatattttatgttgatgtaagatatattatccaacaatagcattgattatgtg  24963200                                                  <------ZmHOX2a(2)                                                 --------->ARR11(3)                                                 <-----------ARR10                                                 <---------ARR11(3)                                           --------->HSFB2a(2)                                           <---------HSFB2a(2)                                        <---------YAB1                           ------>ZmHOX2a(2)                                     --------->ICU4                            --------->ARR11(3)           ----------->HVH21         <---------YAB1                            <---------ARR11(3)          <---------WOX13(1)         ----------->GT1              <---------ANAC58 --------DOF2                       <---------TOE2(3)             <---------ANAC58                  <   ctttgaaattcgattgacatatggttctgaattcaaataatgtttatagaagatcaaacctgtaaatggctggctatttgtgatcttgttatgccttcca  24963300                                                                                               <-----                --------->KAN4(2)                                                              ------               --------->KAN4(1)                                                               ------               --------->HSFB2a(1)                                                        --------->AHL20(2)               <---------HSFB2a(1)                                            --------->ALFIN1-------    --------->ARR11(3)                                  --------->ANAC58    <---------ANAC46  <------    <---------AHL20(1)                      --------->bZIP60(1)    --------->DAG2         <---------AHL20(2)   <---------CCA1(2)        --------->DEAR3(1)          --------->ANAC58    <---------ANAC58 <------- --------->YAB1<---------KAN4(1)            <---------bZIP60(1)   ---------->DOF2   <---------CCA1(2) -------TEIL  <---------KAN4(2)        <---------ICU4 ---------->DOF2       <---------ANAC58---------   cattcatatattgtagaatattcttaggcacagcctcttcaaaatgacatcaaacacaaagcaagagataaagcattagcgtgtgcatatattaaaataa  24963400                                                                <----------DOF2                                                            ------>ZmHOX2a(2)                               --------->HSFB2a(1)         <------ZmHOX2a(2)                               --------->HSFC1(2)         --------->ARR11(3)                      ----------->GT1                     <---------ARR11(3)                    <------------CBF                      --------->ARR14(2)          ----------->GT1---------->DOF2                  --------->AGP1          --------->ANAC58     <---------HSFB2a(1)        <---------AGP1          ----------->GT1 ----AHL20(2)     <---------AHL20(1)              <---------AHL20(2)             --------->DAG2 --->AHL20(1)     <---------AHL20(2)              --------->AHL20(2)           ---------->DOF2 --->AHL20(2)     --------->AHL20(2)             --------->AHL20(1)           <---------AHL20(2) -->AHL20(2)      --------->AHL20(1)             <---------AHL20(2)          --------->AHL20(2) ---AHL20(2)     --------->AHL20(2)              <---------AHL20(1)          <---------AHL20(2) --AHL20(1)      <---------AHL20(2)--------->ETT(2) <---------YAB1       --------->AHL20(2)      ---- >YAB1    --------->ANAC58     <---------HSFC1(2)--------->AHL20(2)     <---------ATHB12   --------->YAB1   tttgacaaatgcaagtaaaataaattgtaaagaaatttcgacagaatgaaatttattttagatctactttgcaaatgaattaaaaggtaagaatcaaaaa  24963500                              --------->TGA2(2)                             <-----------TGA1                             <-----------HVH21                            --------->ANAC46                            <---------ANAC55(2)        <---------YAB1      --------->ANAC55(2)      --------->YAB1        --------->ANAC58                                   <------------CBF      ----------->GT1       --------->ANAC58                             --------->ANAC58  <---------AHL20(2)        --------->ANAC55(1)   <------------CBF       ----------->GT1        <----  --------->AHL20(2)  ------------>CBF >>>>>>>>>MYB98                    <---------ANAC55(2)    <---- -------->CBF  --------->AHL20(2)--------->At4g35610   <------------CBF  --------->ANAC58       <----   acaataaatgataaatataaaatatgcaatacgtcagccctaacttattttgtattgcattgttttatattagtcaagtaaaattgtatttcatatttaa  24963600                                                                                                    -                                                                                                    -                                                                                                  ---                                                                                                  ---                                                          --------->MYB52(2)                      ---                                                          --------->MYB46(2)                     ----                           <---------AHL20(2)           <--------P                               <---            ------>ZmHOX2a(1)                 <---------ARR14(2)                                -----      <---------AtMYB61   --------->YAB1      --------->ARR14(2)            <---------ARR11(3)  <----   <XXXXXXXXXXXXXXXXXXXXXMIR840      --------->ATHB12   <---------MYB52(1)  --------->ARR11(3)  <---- -----TOE1(3)       <-----------GT1 --------->ICU4     <-------GAMYB--------->AHL20(2)        <------ -----TOE2(3)<---------MYB52(1)     <---------YAB1  ------>ZmHOX2a(1)     <---------TOE2(3)  <------- -----YAB1  <----------DOF2--------->AHL20(2)<----------TaMYB80<---------TOE2(3)          <----------DOF2   gattagttttggtcctttggtttaacaattttaatgtcacgattggcatatttcctcggttagttaatgaataaataagataatcaactaaacttttacc  24963700 -------->ANAC58 -------->ANAC58 --->MYB83 ------>MYB52(1) --->MYB46(1) ----->MYB55(1) ------SPL7                   <-----------GT1 ---->MYB46(3)             --------->YAB1 -----MYB59          --------->AtLEC2 -----MYB46(2)     <---------ANAC58                                  --------->YAB1         --------- ---At5g28300      <---------ANAC58          <-----------GT1        <---------YAB1         <---------YAB1 ----GT1        <---------MYB52(1)  <---------AHL20(2)      --------->YAB1             --------->YAB1   gaacgcatcatatcagcccttacttgcaaaaataacatttttttgtttaacaaaacttacaaaaataactatgaaaatataaaaacatatcatatgattt  24963800  Previous    Next  AGI:  At5g62110.1    Description:  DNA binding. similar to hypothetical protein DDBDRAFT_0217746 [Dictyostelium discoideum AX4] (GB:XP_643375.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057) Range:  from: 24959395    to: 24963307    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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