Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                           --------->O2                                                                                           <---------O2                                                                                        ----------->HVH21                                                                                        --------->DEAR3(1)                                                                                        --------->DEAR4(1)                                                                                        --------->At1g77200                                                                                        ------->GAMYB                                                                                        --------->DREB2C(2)                                             <---------MYB52(1)                        --------->MYB46(3)                                            --------->At5g28300                        <------NtERF2                                            <-------GAMYB                              --------->DEAR3(2)                                           <---------DEAR3(2)                         <---------ATERF1(1)                                           <---------MYB46(3)                        <---------ALFIN1                                        ------------>AtMYB77                       --------->ABI4(1)                                        --------->MYB52(1)                         <-----------HVH21                                       --------->At1g77200                         <---------ATERF1(1)                                       --------->DREB2C(2)                         ------>NtERF2                                       ------->GAMYB                              --------->DEAR3(1)                                       ----------->HVH21                          --------->DEAR4(1)                                       --------->DEAR3(1)                         --------->ANAC46                                       --------->MYB46(3)                         --------->ANAC58                                      --------->DEAR3(2)                          --------->RAP2.6(2)                              ------>ZmHOX2a(1)                                   --------->ANAC58                            <---------LBD16----------->GT1                        ------->GAMYB                  <------NtERF2       --------->MYB46(3)                          --------->DREB2C(2)                  --------->LBD16   <---------ALFIN1                             --------->MYB46(3)                 --------->DEAR3(1)--------->ZAT18                             <---------ALFIN1        --------->YAB1      ----------->RAV1(2)                             <---------ARR14(2)      -      ------->TEIL------>NtERF2    --------->DEAR3(1)               --------->DEAR3(1)------>NtERF2-- --->DAG2       <---------LBD16    <---------ABI4(2)               --------->DEAR3(2)--------->DEAR3(1) --->DOF2     --------->DEAR3(1) --------->PCF2         ------>ZmHOX2a(1)   --------->ARR14(2)     <-   gcggattgaatcttcatcgccgcgatattctcctgagcccaccgacggttacttcttcctatttgaaacaccgacgagtttccaccgccaccgacgtttc  24949400                                                                             <-----------HVH21                                                                          <------NtERF2                                                                          <---------At4g35610                                                                          --------->At4g35610                                                                          --------->ZAT2                                                                         ------>NtERF2                                                                        <---------DEAR3(1)                                                                       <---------LBD16                                                                       --------->LBD16                                      ------>NtERF2                   --------->DEAR3(1)                                      --------->LBD16                <------NtERF2                                    --------->RAP2.3(1)             --------->ABI4(1)                                   ------>NtERF2                    ------>NtERF2             <---------MYB46(3)    --------->At4g35610             <---------ALFIN1         ---------            <----------DOF2        <---------ATERF1(1)             --------->AtMYB61        <--------      --------->ARR14(2)        ----------->RAV1(2)              --------->LBD16        <---------ALFIN1      <---------ARR14(2)        <---------ZAT2 --------->At4g35610 --------->DEAR3(1)   ----------->RAV1(1)     <---------MYB52(1)         ==========================RAV   --------->ANAC58       --------->MYB46(3)  <------NtERF2                 <---------At4g35610        --------->At4g35610     <---------ZAT2 ------>NtERF2                  --------->ZAT2 <---------At4g35610--------->MYB46(3) --------->RAP2.6(2) --------->LBD16                --------->At4g35610     <---------At4g35610 <---------MYB46(3) >HSFC1(2) <---------MYB52(1) <-----------RAV1(2)       --------->At4g35610 <-----------RAV1(1)     < -------->ANAC46              ============================RAV   --------->ANAC58   --------->ZAT2   < ------->MYB46(3)       --------->ANAC58      ----------->RAV1(1)------>NtERF2     <---------At4g35610 --------LBD16          --------->ANAC58    --------->At4g35610 --------->ANAC46   --------->At4g35610   tcccgccgtttccgcttgttagtctcacgacttcagctgccgcatgagcagcagtaagagctgcttccgccaccgcggctgtcgcagcagccacagctat  24949500                                                          --------->At4g35610                                                          --------->ZAT2                                                          <---------At4g35610                                                       --------->LBD16                                                     <---------LBD16                                                    ------>NtERF2                                                   --------->DEAR3(1)                                                 <---------At5g28300                                               --------->TGA2(2)                                               ----------->HVH21                                              <-----------HVH21                                             --------->O2 <---------ZAT2                                             <---------O2 <---------GLK1(1)                                             <---------bZIP60(1)                                             --------->bZIP60(1)                                             --------->TGA2(1)                                             --------->bZIP60(2)                                             --------->ANAC58                                             --------->TGA1a                                             <---------TGA1a                                 <-------                                             --------->ANAC46                                --------                                             <---------TGA2(1)                           <---------REM1(1)                                             --------->ANAC58                          <---------MYB46(3)                                            <------NtERF2 --------->GLK1(1)           <---------AtMYB61                                            <-----------STF1                          --------->ALFIN1                                           <---------ATERF1(1)                    ------>ZmHOX2a(2)                                           ------>NtERF2<------NtERF2            --------->CCA1(2)                                          --------->DEAR3(1)                     <------ZmHOX2a(2)                                         --------->DEAR3(2)                      --------->ARR14(1)                                        <---------At4g35610                     --------->ARR14(3)                                        --------->At4g35610                     <---------ARR14(3)                                    --------->DEAR3(1)--------->DEAR3(1)        <---------ARR11(3)                                  --------->MYB52(1)--------->ABI4(1)           --------->GLK1(2)          --------->At4g35610    <---------ALFIN1<---------ATERF1(1)            --------->ARR11(3)          <---------At4g35610    ======================MYC_MYB                  --------->AGP1      - >At4g35610                      ------->GAMYB<-----------TGA1     <---------ANAC46<-----------RAV1(1) -At4g35610                     --------->MYB46(3)--------->DEAR3(2)            <---------AGP1   <--- ---------TOE2(2)               <---------MYB55(2)--------->MYB46(3)            --------->ARR14(2)  - ---------TOE1(2)--------->ANAC46--------->AtMYB61--------->ATERF1(1)           <---------ARR14(2)  <   cgcatgtttgtcagcatccaaaccattttgctcaaccaccgaagccgacgtcaccgccggagctctcttgctggaatttgaagatctggtggtgaagctc  24949600       <---------CCA1(2)                                          --------->DAG2     <---------MYB52(1)                                      --------->LBD16 --At4g35610              <---------DAG2                    --------->HSFB2a(2)                  <--- ->At4g35610              <----------DOF2        --------->LBD16 ---------->DOF2                <---- -------->AtMYB61       --------->At4g35610     <---------HSFB2a(2)                             ----- ------ALFIN1 <---------ETT(2) --------->YAB1  <---------LBD16--------->LBD16 --------->YAB1   <----- -------->DEAR3(1)   <---------At4g35610   <-----------GT1  <---------HSFB2a(2)                <----- ---------ALFIN1 --------->ANAC46   <----------DOF2        <---------LBD16 <----------DOF2   <-------   cacctccgtttatctctcgacgaagcagctttatcagacttttttttactcccgaacagtctcccgaaaaagcccatctttcatcgtcggaaaatcgtcg  24949700                                             --------->ARR11(3)         <---------ANAC46       --------->ZAT6      <-----------RAV1(1)     <-----------GT1<---------ARR11(3) ---NtERF2             <-------GAMYB        --------->RVE1(1) -----DEAR3(2)         <---------MYB52(1)<---------AHL20(2) ->NtERF2--------->ETT(1)   <---------WOX13(1) ----At1g77200        --------->LBD16   --------->AHL20(2) ----DEAR3(1)       <---------LBD16<----------DOF2                     <------ZmHOX2a(1) ----HVH21 <------NtERF2<--------P <---------DAG2              <---------ZAT6   gcgaggttttgtcggagagttctccggttgattaacactttatttaatatctgagattgttttttgtgttagaggaaaaacaaaacataaacttttgtct  24949800                                                             <------NtERF2                                                            --------->LBD16                                                            ------>NtERF2                                                           --------->ATERF1(2)                                                           --------->DREB2C(2)                                                           --------->RAP2.3(3)                                                           --------->RRTF1(2)                                                           --------->RAP2.3(2)                                                           --------->RRTF1(3)                                                           --------->DEAR3(1)                                                           <---------ATERF1(2)                                                          --------->ATERF1(1)                                                          --------->RRTF1(1)                                                          --------->DEAR4(2)                                                          <---------LBD16                                                          --------->ORA47(2)                                                          --------->ERF1                                                          <------NtERF2                                                          --------->RAP2.3(1)                                                         ------>NtERF2                                                         <---------ATERF1(1)                                                        --------->ANAC46              <---------ARR11(3)                                                       ------->PIF5                   --------->ARR11(3)                                                       <-------MYC2               --------->ANAC58                                                       ------->MYC2               --------->ANAC46                                                       ------->MYC3               --------->ANAC58                            <-----------TBP            <-------MYC3        --------->MYB46(2)                   --------->MYB52(1)                  <-------PIF5        --------->MYB59                   <-----------GT1    <---------ZAT14 --------->ANAC58     --------->MYB111(1)     ----------->GT1--------->RAP2.6(3)               --------->ANAC46     --------->MYB52(2)     --------->At4g35610  <-----------TBP        --------->ARR14(2)        >>>>>>>>>>AtMYB44---------    --------->GLK1(2)   <---------ANAC46 <---------------AtSPL3 <XXXXXXXXXXXXXXXXXXXXMIR160A-C  *TSS        ----------->GT1      <------------CBF   --------->ANAC58  ------------>MYB.PH3(2)   <--   atagagaagctaaatagagtttaacggcttatatatagattgcagagtacgtttccacgcgccggcatacagcgagttagttacacgagattttaaaagg  24949900                                                                                    --------->CCA1(2)                                                                                   <---------ARR14(2)                                                                                   --------->ARR11(3)                                                                                   --------->ARR14(2)                                                                                   <-----------ARR10                                                                                   <---------ARR11(3)                                                                              --------->SPL7                                                                            <---------SPL7                                                                          --------------->AtSPL3                                                                         ------>MYB83                                                                         ------>MYB46(1)                                                                         -------->P--------->AGP1                                                                        --------->MYB55(1)                                                                       <---------MYB55(2)                                            ---------->DOF2            --------->AtMYB61                                            <---------DOF5.7(2)        <---------MYB46(2)                                         <-------GAMYB                 <---------MYB111(1)                                        <---------MYB46(3)             <---------MYB111(2)                                        <---------DEAR3(2)             --------->MYB46(3)      <-----                                      --------->ATERF1(1)             --------->MYB46(3)       ------                       <----------DOF2<------NtERF2                  ------>MYB83  <---------AGP1                 <---------ANAC58   <---------DEAR3(1)               ------>MYB46(1)<------ZmHOX2a(2)            <---------ANAC58        <---------ANAC58                 -------->P   <---------CCA1(2)   <---------AHL20(2)  <---------DAG2<-----------HVH21              ========================HOX2a_HOX2a  <---------AHL20(2)<---------WRKY18(1)<---------DEAR3(1)           ------>ZmHOX2a(1)------>ZmHOX2a(2) ->DOF2     <---------ANAC58  ---------->DOF2    <---------WRKY12   =======================HOX2a_HOX2a --------DOF2    <---------ANAC58   <---------ANAC58      ----------->HVH21------->GAMYB   <---------   cttttttattttttgcttagcttgactttatctaaagggcgtcggttaaagtcaatgggcctgactaatcctaccaaccgtaccagatctgtgctttgtg  24950000                                        <---------AHL20(2)                                        --------->AHL20(2)                           <-----------TGA1                          <---------bZIP60(1)                          --------->TGA2(1)                                         <---------AGP1                          --------->bZIP60(1)                                       --------->ARR11(3)                          <---------ANAC55(2)    <----------DOF2                    --------->AGP1                          --------->ANAC55(2)    <---------DAG2                     <---------ARR11(3)                          --------->ANAC46    <-----------GT1                      <---------CCA1(2)                          <---------TGA2(1)  <-----------GT1            ----------->GT1<----------DOF2                         <-----------STF1    <---------AHL20(2)         <---------ANAC46 ----TOE2(3)         --------->WOX13(1) <---------AHL20(1)            <---------ZAT14 ------>ZmHOX2a(2) ---->ID1     <---------AHL20(2)    <---------AHL20(2)                --------->ZAT14<------ZmHOX2a(2) -DOF2       --------->AHL20(2)    <---------AHL20(2)       ----------->GT1  --------->ICU4   gttttgttcaaaccatttaatatcaattacgtcattttttattttatttaactttttctgtaatgtgaattgtgaagtgaatattagatctttgaattat  24950100                                                 =====================bZIP_DOF                                                 <---------ANAC55(2)                                                 =====================bZIP_DOF                                                 --------->TGA1a                                                 <---------O2                                                 <---------TGA1a                                                 <---------ANAC58                                                 <---------bZIP60(2)                                                 <---------ANAC46                     <---------ICU4              <---------ANAC58                     --------->YAB1   <---------ICU4                    <---------ATHB51  --------->ATHB51                               --------->ZAT14                    <---------AHL20(2)<--------ATHB1                            <---------ZAT14                 --------->AHL20(2)   --------->ATHB12        ---------->DOF2   --------->ZAT14                --------->AHL20(2)   --------->ICU4        <----------DOF2      <---------ZAT18                <---------AHL20(2)   <---------YAB1 <-----------HVH21       <-----------GT1      --------->TOE1(2)      ==============================bZIP_DOF    <---------ICU4<---------ZAT14      --------->TOE2(2)      ---------->DOF2   <------ZmHOX2a(1)       --------->ATHB51        ------   gtagaaaacgtatgaaaaataaataatgaagaaaagagaataattgggaggacgtgtcattctttgaagcccataatttcactgcagtctagtgtctgtg  24950200                                                                                                    <                                                                                               <-----                       <----------DOF2                                                        -------                    <-----------GT1                                                           -------                <----------DOF2                                                               <------                <---------DAG2                                                                -------              <------NtERF2                                                                   <------              --------->At4g35610                     <----------DOF2                         <------              <---------At4g35610            --------->RAP2.6(3)                       --------->YAB1 ----->HVH21  <---------ZAT2                --------->ATHB12      <---------AtLEC2  <---------GLK1(1)   acttctgcaatttggcagcttttttctttgcttcaatccaatacaatgactgcaaactttacaaatgtgtatggaatatgtttttgaaatcagaaatata  24950300  Previous    Next  AGI:  At5g62070.1    Description:  IQD23 (IQ-domain 23); calmodulin binding. similar to IQD24 (IQ-domain 24), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G07240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63692.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 24947145    to: 24949802    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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