Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    ------>ZmHOX2a(1)                                                                 <---------ANAC58 ----->ZmHOX2a(2)                                                                   <---------ANAC46 -----ZmHOX2a(2)                                                                    <---------ANAC58 ------>ARR14(3)                                     ---------->DOF2          <---------ARR11(3) -------ARR14(3)                                   <------ZmHOX2a(2)       <---------WOX13(1) ------>ARR11(3)                                 --------->At4g35610     --------->ATHB12           - -------ARR11(3)                      <---------At4g35610       <----------DOF2 ------>ZmHOX2a(2)   - ------>ARR14(2)          <---------ARR11(3)     <---------At4g35610<---------AHL20(2)  ---------->DOF2 -------ARR14(2) ---------->DOF2    <---------WOX13(1)          <---------DAG2--------->ARR11(3)    -   gatcctacagtagtaagaacaaagtcaatatccaatagattgctgattttcagatcaaagagcaaacttttttattcattgatcttgcttaaaaggaatc  24944100                            <---------ANAC55(2)                            <---------ANAC55(1)                            --------->ANAC55(2)                            <---------ANAC46                           <-------TEIL              --------------->AGL15             ----------------->AGL1             <-----------------AGL1             <-----------------AGL3             <-----------------AG             <-----------------AGL2                          --------->YAB1 -------->ANAC55(1)     <---------GLK1(1)                   <---------ATHB12              ---------->DOF2 -------->YAB1<---------------AGL15                   ----------->RAV1(1)            --------->ZAT18 -------->ANAC46<---------DAG2                     --------->ANAC46           ---------->DOF2--------   acacataatcaagtttcaatttttggaaatacgtatagaaaacaatagagaacccacaacaaatcatagaagagattactaaaagagcatactaaagatt  24944200                                                                  <-----------RAV1(2)                                                                <-----------HVH21                                                              --------->At4g35610                                                              <---------At4g35610                                                            --------->YAB1         --------->ARR14(2)      --------->At4g35610                                --------->WOX13(1)        <---------ARR14(2)      <-------GAMYB          ---------->DOF2         --------->GLK1(1)            --------->GLK1(1)      <---------At4g35610--------->At4g35610        <---------ARR11(3)   <-------PIF5  <-----------HVH21    --------->YAB1               --------->ARR11(3)   ------->PIF5           <---- ->ATHB12            --------->GLK1(2)   --------->GLK1(1) <---------ATHB12     --------->YAB1  <----   gaactgtgagttgaaggaaacagaatcagaagaaagcagagagatttcataagagatatcaatcagcttcaggcacttgcaaacatatccaaaaatttaa  24944300                   --------->LBD16          --------->YAB1                                           ---------->DOF2         <---------YAB1                                      ----------->GT1         ----------->GT1                                ------>MYB83           --------->TOE2(3)       --------->YAB1             ----------->GT1       --------->MYB52(1)     <----------DOF2      --------->ICU4      ---------->DOF2               ------>MYB46(1)  <------ZmHOX2a(1) -----TOE2(3)     <---------LBD16 --------->TOE2(3)   <---------------AGL15    --------->TOE1(3) -----TOE1(3)    <---------LBD16 ----------->GT1    ------------------------>ANAC81   gcttgaaaatgatgataaatcgggggaacaaagaaatgttaaaatcaaacaaaaaaccaaacagagtaacaaagaggaaaactttaaaaactacttgaat  24944400              <---------ICU4              --------->YAB1             <---------ATHB51             --------->ICU4                             --------->At5g28300  --------->ARR14(2)                                    <-----------HVH21              --------->ANAC58  <---------ARR14(2)                                  <---------DEAR3(1)             --------->MYB52(1)  <---------ARR11(3)                                  <---------ANAC46              <---------SPL7  --------->ARR11(3)                               ----------->HVH21           <---------At5g28300  -  <-----------ARR10                                ----------->TGA1            <---------LBD16     --  --------->GLK1(2)                          --------->ALFIN1 --------->O2    --------->MYB52(1)  <-- <---------GLK1(2)                 >>>>>>>>>TBF1<---------AtMYB61        <---------YAB1--------->ANAC58 <---------ARR14(1)     <-----------HVH21 <---------DEAR3(1)  <---------O2  ------->TEIL  --------->MYB52(1)   agagaatcttcagaaataatgaaacctgtcaatggaagaagaagacggtgatggtgacggtgagacgagacgactatgaatcacggcgaacgaaacagag  24944500                                                          ----------->GT1                                                      <---------SPL7                                                    <------ZmHOX2a(2)                                              <-----------HVH21                                        *TSS <------MYB46(1)                                      ---------->DOF2------>ZmHOX2a(2)                                      --------->MYB52(1)--------->SPL7                                 <------ZmHOX2a(2)  <---------------AtSPL3                                <---------ARR11(3) --------->ARR14(2) -------->At5g28300             --------->ARR11(3) <---------ARR14(2) --------->GT1              <---------YAB1   <------MYB83 <---------HSFB2a(2)   <-----------GT1 -------DEAR3(1)          --------->CCA1(2) --------->MYB59        <---------TOE2(3) <---------MYB52(1)   acggtgaatgggttttagaatggctaagttatgagatcactaaaggaaggtcagatcgtacgggaaattagggattttagttaaaccgttctggtttatt  24944600              ----------->TBP        <------MYB83        <------MYB46(1)              <----------DOF2                                           ------        ----------->GT1          <------ZmHOX2a(2)                                         ----------       <---------AtMYB61        <---------ARR11(3)                                       <-----------GT1       --------->MYB59    ------>MYB83                                                  <---------AHL20(2)     <---------MYB52(1)   ------>MYB46(1)                                       <---------At4g35610   <------MYB46(1)      <---------MYB59                                         --------->At4g35610   <------MYB83        --------->DEAR3(2)   <----------DOF2                 --------->TOE2(3)<-------   ttgttcggtttggtttataaatcggaccgaaccagatcacttttgacttttgaaaaaatgtccaaactccaaacgatacctcagctaaaatttatcgtac  24944700                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                      --------->GLK1(2)                                                                                   --------->ICU4 ---                                                                              ----------->GT1     ---                                                                            <------------CBF      <--                                                                          <---------AHL20(1)      ---                                                                      --------->AHL20(2)       ------                                                                     --------->AHL20(2)        ------                                                           <---------YAB1 --------->AHL20(2)  <------                                                        ---------->ID1<---------AHL20(2)     <-------                                                       <-------GAMYB --------->AHL20(1)      --------        --------->ARR11(3)                            --------->MYB52(2)  <---------AHL20(2) <------- --->SPL7--------->GLK1(1)                   <---------ARR11(3)      <---------AHL20(2)      -------- ----->AtSPL3      <----------DOF2           --------->ARR11(3)      <---------AHL20(1)    <---------YAB1 --SPL7 <---------ARR11(3)        ---------->DOF2     <---------MYB46(3)  --------->AHL20(1)---------   catgtgagaagatttctatgtcttttttttttttgctaaagaagatagattttagtttgttgtaatagaaatttaatttattgtaaaaattctattataa  24944800     --------->YAB1    <---------YAB1   <-----------GT1 --------AHL20(2) -------AHL20(1) -------ARR11(3) ------>ARR11(3) ------>AHL20(1)                         --------->YAB1 -------AHL20(2)                        ----------->GT1 ------>AHL20(2)                      <------------CBF --->YAB1                           <---------AHL20(2) --->AHL20(2)                       --------->AHL20(1) ---YAB1                           --------->YAB1 --AHL20(1)                   ------------>CBF   --------->CCA1(2)        <---------ARR14(2) ->AHL20(1)           --------------->AtSPL8    --------->AHL20(1)        ------->TEIL --AHL20(2)           <---------ICU4<---------AHL20(1)      ---------->DOF2         <---------AHL20(2) ->AHL20(2)           <---------------AtSPL8   --------->AHL20(2)         --------->ARR14(2) >YAB1        <---------MYB52(1)   --------->AHL20(2) ------->TEIL       <---------CCA1(2)<---------CCA1(2)   tatattttcattatccgtttcgaattagtactcacaattatattgataaatatatgaacatgtaaagccctcgttgtatcttccatataatcaaatctct  24944900                                                                    --------->LBD16                                                                   <---------ANAC46             <----                                                                   ----------->GT1            -------      --------->ANAC55(2)                                 <---------DEAR3(1)     <---------STY1(1)     <---------TOE1(3)   ---------->DOF2   <---------ARR11(3)      <---------ANAC58     --------->DAG2     <---------TOE2(3)--------->ANAC58     <-----------ARR10<------NtERF2        --------->STY1(1)    <-----------GT1   --------->ANAC58     --------->ARR11(3)      <---------ANAC58    ---------->DOF2   agggtttaacgtgatgaagagaagaagcaaagagagcaactacaatatctcatcacaacgtcgtcgataccgtgaaatctccactagggaaaagtcccgt  24945000  Previous    Next  AGI:  At5g62050.1    Description:  OXA1 (Oxidase assembly 1); P-P-bond-hydrolysis-driven protein transmembrane transporter. Identical to Inner membrane protein OXA1, mitochondrial precursor (OXA1) [Arabidopsis Thaliana] (GB:Q42191;GB:Q42190); similar to OXA1L (INNER MEMBRANE PROTEIN OXA1-LIKE) [Arabidopsis thaliana] (TAIR:AT2G46470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69547.1); contains InterPro domain 60 kDa inner membrane insertion protein; (InterPro:IPR001708) Range:  from: 24941000    to: 24944540    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g62060.1    Description:  F-box family protein. Identical to Putative F-box protein At5g62060 [Arabidopsis Thaliana] (GB:Q9FIT3); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G32420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70090.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 24944914    to: 24945924    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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