Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ------>NtERF2          <---------LBD16                     <---------ARR14(2)          ------->MYC3                        --------->ARR14(2)          <-------MYC3                       --------->KAN4(1)         <---------O2                        --------->HSFB2a(1)         --------->O2                        <----------TaMYB80         --------->ANAC58                    <---------HSFB2a(1)         --------->ANAC58                    <---------KAN4(1)         --------->TGA1a                    <---------KAN4(2)                                  <-----         ========================bZIP_DOF   <---------ARR14(2)                            --------->ANAC55(2)         <---------TGA1a          <------MYB46(1)                                         --------->ANAC58         --------->ANAC46         <------MYB83--------->KAN4(2)                           --------->ANAC58       <---------ALFIN1        <---------MYB52(1)                                         <---------ANAC55(2)      <---------REM1(2)    <---------------AGL15                                     <---------AHL20(2)    --------->ETT(2)      <-----------GT1   ---------->TaMYB80                       <---------ICU4  <-----------GT1         <-----------------AGL1                                --------->AHL20(2) ----->AHL20(2)       <----------DOF2       --------->ARR14(2)         --------->ATHB12   --------->ANAC46 ------AHL20(2)   --------->KAN4(2)  --------->ETT(2)                 <---------YAB1--------->AHL20(2) --AHL20(2) --------->LBD16--------------->AGL15                    --------->YAB1--------->YAB1    -   tttttatcgacacgcgggcttattcttttctccatttggtcgatcgaatattcgaatgtaatggggacaatagttattgagttttaataaatacgaaacg  24939600                                                                                   <---------REM1(2)                                                                               <-------TEIL                                                                            <---------ANAC46                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            <-                                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->ANAC58  --------->ARR11(3)         <---------MYB52(1)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ANAC55(1)  <---------ARR11(3)      ------>ZmHOX2a(2)        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --------->ANAC58 ----ANAC55(2)       <---------WOX13(1)           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->ANAC46 ---------->GT1   <---------AHL20(2)              <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------LBD16-   tgaagataattttgcaatagataattgatctgttatctatacatgtgagttttttttttttttttttttttttttgttatgtgcatacacggaagtattt  24939700                                                               <------------CBF                                                              --------->YAB1                                                              --------->ATHB51                                                              <--------ATHB1                                                              -------->ATHB1                                                              --------->ATHB12                                                              <---------ICU4                                                             <---------ATHB51                                                             <---------ATHB12                                                             --------->ICU4                --------->AHL20(2)                         --------->YAB1      <---------ANAC55(2)                                 <---------YAB1                --------->ANAC55(2)      ----------->GT1                                    ------------>CBF               <---------ANAC55(2)      --------->ANAC55(2)       <-----------GT1         <-----------GT1     ----------->GT1     --------->MYB59  ----------->GT1         <---------ANAC55(2)          <---------TOE2(3)     ---- --------------AGL15  <---------ANAC55(2)     --------->ANAC55(2)   ----------->GT1   <-----------GT1 -------->AHL20(2)    --------->ANAC55(2)     ----------->GT1<---------YAB1<---------YAB1  <---------   tttaaaataggtaacaaaataaacatgtaatttctaaccatatagaataggtaacaaattacaataattgaagtaatatggttagaaattacatgtcaga  24939800                    <----------ID1                                                        <-------TEIL             >>>>>>>>>RAP2.2                                                         --------->CCA1(2)           <---------ARR11(3)              --------->YAB1                           <---------ARR11(3)      ------------>CBF      <-----------HVH21           <---------TOE2(3)           --------->ARR11(3)  <-------TEIL    <---------ICU4         --------->AHL20(2)                    ----------->GT1 ----->CCA1(2) ---------->DOF2          --------->YAB1  --------->HSFB2a(2)  <---------ZAT14 --HVH21   --------->ARR11(3)      ----------->GT1      <---------HSFB2a(2)  --------->ZAT14  <------   tatatacatacaatatctaaagatgacaaatgtcaaatagtaaaataatagagcatttatggaagactatctaattcagtatagtagatatatacataca  24939900                                                                                                    <                                                                                                  ---                                                                                                -----                                                ---------->DOF2                              --------                                           <----------DOF2                           --------->ANAC58                                        --------->GLK1(2)                            --------->ANAC58                                       <---------GLK1(2)         <-----------HVH21  <---------TOE2(3)     ------------>CBF              --------->LBD16         ---------->DOF2         --------->MYB52(1) -TEIL               <----------DOF2--------->LBD16     ----------->TBP     <---------YAB1 --------->YAB1   tacaaaatacaatctatctctcactttgtgccaagtcccgagattctttagaaagcctatataaagctatcacatgttttcattctaacgaaatcagcat  24940000       --------->ANAC58                                                                   -----------       --------->ANAC58                                                              --------->ANAC46       --------->ANAC46                                               --------->ATHB12    --------->ICU4 --------->YAB1                                        --------->YAB1<---------ZAT6 <---------HSFB2a(2) ---------ATHB12                                      --------------->AGL15         --------->HSFB2a(2) ------>WOX13(1)          ----------->GT1             <---------------AGL15       ------->TEIL ------->CBF            ---------->DOF2              <-----------------AGL3   --------------->AtSPL8 ->At4g35610    <------------CBF                  ----------------->AGL3   <------ZmHOX2a(1)   caatcacaaacgcaaacacattggagcaaagaaaaatgtcaagagaaatagagccactaatagtgggaagagtgataggagatgtactcgaaatgtttaa  24940100                                                 --------->YAB1                                                <---------ATHB12                                          <---------ARR14(2)                                          --------->ARR14(2)    <------NtERF2                      <-                                         <---------CCA1(2)     ------>NtERF2              <---------ANAC46                                       --------->YAB1       <---------ATERF1(1)    --------->ANAC46--            --------->YAB1            <<<<<<<<<ARR2      <---------ZAT2      ========================   --------->ALFIN1  <----------DOF2  <<<<<<<<<ARR1      --------->ZAT2      ======================== >GT1----------->HVH21         ----------->RAV1(1)<-----------HVH21          ------>ZmHOX2a(1)    <--   tccaagtgtgacaatgagagtcactttcaattccaacacaatcgtatccaatggtcacgagctcgcgccttctcttctcctctctaagcctcgcgttgag  24940200              --------------->AtSPL8            ------>ZmHOX2a(2)           <------ZmHOX2a(2)          --------->ARR14(2)          <---------ARR14(2)          --------->AGP1          --------->ARR11(3)                                                    <---------MYB59          <-----------ARR10                                                     <---------------AGL15          --------->ARR14(3)                                                    --------->TOE2(3)          <---------ARR14(3)                                                    <---------DAG2          <---------ARR11(3)        --------->ANAC55(2)                         --------------->AGL15        ----------->ARR10           --------->ANAC58                           ----------------->AGL2    <------NtERF2                   --------->ANAC58                           ----------------->AGL3   ------>NtERF2                    <---------ANAC55(2)                    --------->ANAC55(2) --------DEAR3(1)                   --------->ANAC46                       <---------ANAC55(2) ---->ZmHOX2a(2)                    --------->ANAC55(1)                   --------------->AtSPL8 ====HOX2a_HOX2a                    ----------->GT1         --------->AHL20(2) <-----------------AGL3 =====HOX2a_HOX2a            --------->TOE2(3)<----------DOF2    <-------TEIL ------->TEIL ----ZmHOX2a(2)        ----------------------->TaNAC69(2)--------->TOE2(3)<---------------AtSPL8   atcggtggccaagatcttcgttccttcttcaccttagtacgtaattagctttcttctaaacttaaaatacatatgttaagtaccttatttagttctctct  24940300                                              --------->TCP16(1)                        --------->ARR11(3)                                              ------->TEIL                              <---------ARR11(3)                                           <---------WOX13(1)                           <---------ARR14(2)                                        --------->ICU4                           <---------ANAC46                                        <---------YAB1                           <---------ANAC58                                      --------->YAB1                             <---------ANAC58                                     <------ZmHOX2a(2)                    ------>ZmHOX2a(1)                                     ===================================HOX2a_HOX2a     --------->ARR14(2)                                    --------->ARR11(3)                   --------->TOE2(3)                                ---------->DOF2                         <---------ICU4 --------->RVE1(1)                          <-----------GT1--------->ATHB12        ------>ZmHOX2a(1)--------->LBD16  <-   --------->TOE2(3) <----------DOF2<---------ARR11(3)------>NtERF2    --------->ICU4  <---------GLK1(1)   tgtagcattaatcttgtggttttctttttaactcgaaagatcatgatggaccccgatgccccgagtcctagtaatccttatatgcgtgaatatctgcatt  24940400                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                          -----------                 <-----------GT1    <-----------GT1                                     <------MYB46(1)              <---------GLK1(1) <---------AHL20(1)                                      <------MYB83              --------->GLK1(1) --------->AHL20(2)      <---------ANAC55(2)          <------ZmHOX2a(1)             <---------ARR11(3) --------->AHL20(1)      --------->ANAC55(2)        <---------TOE2(3) -------P    --------->ARR11(3)<---------CCA1(2)<<<<<<<<<EIN3  <----------DOF2    <---------LBD16<---   ggtaagtcgattgaagatatcacattacttctcatatattacaacaacaatgtataatatgtattctttatgttctcatcaaattcaggatggtgacaga  24940500  Previous    Next  AGI:  At5g62040.1    Description:  brother of FT and TFL1 protein (BFT). Identical to Protein BROTHER of FT and TFL 1 (BFT) [Arabidopsis Thaliana] (GB:Q9FIT4); similar to TFL1 (TERMINAL FLOWER 1), phosphatidylethanolamine binding [Arabidopsis thaliana] (TAIR:AT5G03840.1); similar to flowering locus T like protein [Populus nigra] (GB:BAD08339.1); contains InterPro domain Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); contains InterPro domain Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858) Range:  from: 24940036    to: 24940935    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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