Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->At5g28300                                    --------->ZAT6                                 ------->GAMYB   --------->AHL20(2)                               --------->At4g35610     ---------->DOF2        ----------->GT1                               <---------At4g35610--------->AHL20(2)    <-----------HVH21                           <-----------GT1       <---------AHL20(2)------->GAMYB            --------- <---------AHL20(2)   <---------AHL20(2)    --------->At5g28300  --------->At4g35610<---------AHL20(2) ->MYB52(1)           --------->AHL20(2)   ----------->GT1       <---------At4g35610--------->AHL20(2)   gattttttttggcaacttgagtatttatttttcaactcacagtaactgtaaataaataaaagtattcaactcacagtcaccagtaaataaatactaccag  24927200                                      <------ZmHOX2a(1)                                    <---------TOE2(3)                     <---------ANAC46                          <---------WRKY45                         <---------GLK1(1)                          <---------WRKY12                    <---------LBD16                          <---------WRKY38(1)                 --------->LBD16 >MYB52(1)               --------->WRKY18(1)                <---------LBD16                        <-   accatagttttttcaagaattgttttggtcaacaattttaggatgacttaaattgctatatttctggggaaatacgacttggaaatgtctgcaatttggg  24927300                                                         <---------GLK1(1)                                                         --------->CCA1(2)                                                        <---------ARR14(2)                                                   ---------->DOF2                                         <---------AHL20(1)                                         --------->AHL20(1)                               <---------AHL20(2)                                         --------->AHL20(2)                               --------->AHL20(2)                                         <---------AHL20(2)                              --------->AHL20(2)            <-----------GT1             --------->AHL20(2)           <-----------GT1    <---------YAB1           <-----------GT1              <---------AHL20(2)        --------->AHL20(2)<----------DOF2          <---------AHL20(2)        --------->AHL20(2)  --------->ARR14(2)      --------->DAG2 ---------DOF2                      <---------AHL20(2) <------ZmHOX2a(1)      ---------->DOF2  ------   tcttttcttcaatttatcttctccaatttgttttttaaaaaattaaattttagaaaaggatatgtcaattttttctattgaaaaggctttattaaaaaat  24927400                                                                       --------->LBD16                                                                      --------->HSFB2a(2)                               --------->ANAC55(2)               --------->PCF5                               <---------TGA1a              ----------->RAV1(2)                               <---------O2               --------->ARR14(2)                --------->AHL20(2)   <----------DOF2      <---------ARR14(2)              ----------->GT1  =================bZIP_DOF--------->DEAR3(1)   ----------->GT1            ---------->DOF2    <---------ANAC55(2)    --------->At4g35610--------->ARR14(2)            =============================bZIP_DOF     <---------At4g35610<---------ARR14(2)           <------ZmHOX2a(1)   --------->O2        <-----------HVH21  --------->ANAC46      --------->ALFIN1     <-----------TGA1       <---------bZIP60(1) --------->LBD16             <--   --------->DAG2    --------->AHL20(2)           --------->bZIP60(1)--------->LBD16             <---  =======================================bZIP_DOF <---------bZIP60(2)<---------LBD16           <-----  ---------->DOF2    <---------AHL20(2)          <---------AtMYB61  <---------LBD16     <---------MYB52(1) ------------------>ANAC81 <-----------HVH21 <---------ANAC46   <-----------HVH21   --------->MYB52(1)   aagaaaaagtggaggaaagaaaataaaatcgtcacttgtctttggttttgtgaggtcgcagaccctggtcccccggaaatggttacaaccggtaatagcc  24927500                                                                        <---------WOX13(1)                                                                       <------------CBF                                                                      -------->HAHB4                                                                      --------->ATHB12                                                                     --------->ICU4                                  --------->GLK1(1)                  <---------YAB1                                 --------->ARR14(2)                  <---------ATHB12                                <-------GAMYB                 <-------GAMYB  <---------ZAT2   ---------->DOF2             --------->LBD16               <---------MYB46(3)        <-----------GT1 <---------YAB1               <---------ANAC46              <---------DEAR3(1)      *TSS -------MYB52(1)      --------->At5g28300                  <---------LBD16   --------->At4g35610 ------RAP2.6(3)     --------->LBD16 ----------------->AG  --------->LBD16   <---------At4g35610 ----LBD16    --------->YAB1 <---------LBD16            <---------At5g28300  --------->ZAT2   ggtatgaaagagggaatggtaaccggtgaatgccggttatccatatgggttagaagtttaccgcggttgaaatgattgaagctgagttttgactacctct  24927600                         --------->LBD16               <------NtERF2              <---------ATERF1(1)             <---------DEAR3(1)             ---------->DOF2           <-----------HVH21               <------ZmHOX2a(1)          <---------MYB46(3)          <------ZmHOX2a(1)         <---------AtMYB61        ---------->DOF2           ---------->DOF2     <----------ID1<------   ggttaagcccattggtcgcctcatacccagaaaaacaaaaggataggaaagacgaagaaataaaaagagagagaatgttagagagacaaactctgagaga  24927700                                                                        <------NtERF2                                                                      <---------DEAR3(1)                                                                     <---------ORA47(1)                                                                     --------->SPL7                        <---------DEAR3(2)                           --------->RAP2.6(3)                       <---------TOE1(2)                            <------ZmHOX2a(1)                      <------NtERF2               ---------->DOF2  ----------->HVH21 ----ID1            <---------DEAR3(1)  ----------->HVH21       <---------ANAC46              <------   caaaacaagagaaaatcgctcgtcgtcggtattcaagcgtctgtgactccgataaagcctagactagcgaggacggcgagagagagagagagagagcttt  24927800        <---------ARR14(2)        --------->ARR14(2)        ------->TEIL   <------NtERF2        <---------ARR11(1)       <---------CCA1(2)        ----------->GT1       <---------ARR14(1)      <---------TOE2(3)     <---------ANAC58 --------->ANAC58           <-----------GT1              <---------YAB1     <---------ANAC58 --------->ANAC58      <---------MYB46(3)                ----------->HVH21 ----DOF2            xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              <-----------GT1             <--   ggagttgtcgtatctctaaatcggaggcaatttgaggtgaaattggtggttttatcgtttgattctagggtttatcttctctgatagttttatcgagtaa  24927900                             <---------MYB46(3)---------->DOF2       --------->MYB52(1)                    <---------MYB46(3)     <----------ID1       --------->ZAT18                   <---------YAB1   <---------------------WRI1  <---------ZAT18              <XXXXXXX      --------->At4g35610<---------YAB1  ---------->DOF2        <---------ZAT14         <----------DOF2 ---------HVH21 <---------ZAT6   --------->MYB52(2)             --------->ZAT14         <---------DAG2   tgtcaaggagctaaactagtggtgattgtgtttgttagtgagataaagacaaaggaaggaatcaagtggactaccgaagcgagttttgagctttttcaga  24928000                                                                     --------->At4g35610                                                                     <---------At4g35610                                                                     <---------ZAT2                                                                     --------->ZAT2                                                                 ------>ZmHOX2a(2)                                                                --------->CCA1(2)                                                                <------ZmHOX2a(2)                                                               --------->AGP1                                                               --------->ARR14(2)              <---------ANAC58                                 <-----------ARR10--------->ALFIN1              <---------ANAC58                                 <---------AGP1 <------MYB83    <------           --------->GLK1(1)                  <------MYB83     --------->ARR11(3)    <---------ANAC58           <---------GLK1(1)                  <------MYB46(1)  <---------ARR14(2)    <---------ANAC58  --------->ARR14(2)                         --------->MYB59   <---------ARR11(3)    <---------ANAC46  <---------ARR14(2)          --------->At4g35610    --------->At4g35610      <------MYB46(1) <------ XXXXXXXXXXXXMIR866-3P        <---------At4g35610  <-----------RAV1(2)  <---------LBD16   <----------   gacggatttggagatttcttgttgatatcgtctgcttagaggcttatttggtaccagatgaaacagatctgagcttcggaaggtatggcgagttcggagg  24928100  Previous    Next  AGI:  At5g62000.1    Description:  ARF2 (AUXIN RESPONSE FACTOR 2); transcription factor. Identical to Auxin response factor 2 (ARF2) [Arabidopsis Thaliana] (GB:Q94JM3;GB:O23671;GB:Q9C5W5;GB:Q9FIT6); similar to ARF1 (AUXIN RESPONSE FACTOR 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G59750.3); similar to ARF1 (AUXIN RESPONSE FACTOR 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G59750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68379.1); similar to putative auxin response factor [Brassica napus] (GB:CAG30068.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67897.1); contains InterPro domain Transcriptional factor B3; (InterPr Range:  from: 24927584    to: 24932440    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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