Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   -----ZmHOX2a(2)                       ---------->DOF2                                    <----------DOF2 -------ARR11(3)            <---------ETT(2)                                           ------>ZmHOX2a(1) ------>ARR14(2)            --------->ETT(2)                                    <-----------GT1<----- -------ARR14(2)         <---------REM1(1)                  <--------ATHB1     <---------CCA1(2) -----GT1            <---------------------WRI1             <---------ICU4  <----------DOF2    <-----   gatccttgaagaaaaaaaaaaacagcgatgtagacagagatgaaagagaagagagaagagaataattccttcttctctcttttatcttcctcctttcctt  24901500                                               ---------->DOF2                                            --------->LBD16                                           --------->ANAC55(2)                                           <---------ANAC46             <---------AHL20(2)                                     --------->AHL20(2)             <---------AHL20(2)                                     <---------AHL20(2)--------->AHL20(1)      ----------->GT1      <                                    --------->AHL20(2) <---------AHL20(2)     --------->DAG2       --                               <---------GLK1(2)       --------->AHL20(2)    ---------->DOF2       <-  <-----------GT1       <-----------HVH21  <---------ANAC58         --------->AHL20(2)             <- -----DOF2             --------->WOX13(1)  <---------ANAC55(2)   <---------AHL20(2) --------->ARR14(2) ----DAG2             --------->MYB46(3)   <---------ANAC58     --------->AHL20(2)  <---------ARR14(2)   tttgtttccttctatccaatcgcatccatcacagaatatttaattccgtaaaagaaattttttatattatatatataaaaaaagtgaatcggcgttttca  24901600                                    <---------O2                                    --------->O2                                    --------->ANAC46                                    <---------TGA1a                                    ----------->HVH21                                    --------->TGA1a                         --------->ICU4                                 ----------->HVH21                   --------->DEAR3(2)             =================================bZIP_DOF               --------->SPL7             <----------DOF2   ------>ZmHOX2a(1)                   <---------PCF2       <----------DOF2     <---------ALFIN1                       ----------->HVH21       =======================================bZIP_DOF           --------->SPL7               -------    <-----------GT1    <-----------GT1                         --------->TOE1(2)        <---------DAG2 ---------AHL20(2)    <-----------GT1                         <---------ANAC58          <----------DOF2 ------->AHL20(2)    --------->HSFB2a(1)                      <---------ANAC58 <---------YAB1 ------>NtERF2 --------AHL20(2)    --------->GLK1(1)                    <--------ATHB1    <---------YAB1   <------- --------AHL20(1)    <---------GLK1(1)  ------>NtERF2--------->MYB46(3)  <---------DEAR3(1) <--------   attttttttctttctcttttcgaatttcccctcctctcacgacgcgttgtttccaacgaataattcgtgcgaccggcgatgatttttgagcttttccggc  24901700                         --------->LBD16                         ------>NtERF2                       --------->RAP2.6(3)                       <---------LBD16                     --------->GLK1(2)                     --------->ARR14(2)                     <---------ARR14(2)                 --------->LBD16                --------->ANAC58                --------->ANAC58     ----------->RAV1(1)               ------>NtERF2         ------>NtERF2                               <---------LBD16           ----------->HVH21        <---------ETT(1)                    <---------AHL20(2)           --------->WRKY12         ----------->HVH21                  <---------YAB1           <---------DEAR3(1)       --------->ANAC46                <---------RVE1(1)           --------->DEAR3(1)      --------->SPL7                  --------->ARR11(3)           <---------ETT(2)  --------->ANAC58                      <---------GLK1(2) -->LBD16  --------->ETT(2)  --------->ANAC58                     <---------RVE1(1)<---------ANAC46 --LBD16 <-----------HVH21 <---------ALFIN1               <------ZmHOX2a(1) <---------AHL20(2) -LBD16  --------->LBD16--------->ANAC46         --------->MYB52(1)<---------ARR11(3)----------->GT1   gatattcttcccgtcgacgcgcgattccggcactccctccgacagagagagaaacggagaggagagagagatttttatttttttggggggtttttttggt  24901800           <------MYB83           <------MYB46(1)        <-------GAMYB       --------->MYB111(1)       --------->MYB111(2)       --------->MYB55(2)       --------->MYB46(2)       --------->MYB52(2)       <---------MYB46(3)     <---------MYB52(1)     <--------P    <-------GAMYB    --------->At5g28300   <---------MYB46(3)                      <------ZmHOX2a(1)                     --------->At4g35610  <---------ANAC46                        ----------->GT1                        <---------At4g35610  <---------RAP2.6(2)                    ----------->GT1                   <------ZmHOX2a(1) <---------LBD16           --------->AHL20(2)       ---------->DOF2<------ZmHOX2a(1)           ------   ttttgcggttagttggtttagagaacaaaaaaaatgagagggagaggaaaaaacaaaagagggaaggaaggagagaaggactctgctacgttgtatgtac  24901900                                                                                              -------                                                                                              <------                                                    <-----------GT1                          <-------                                                 --------->YAB1                             <--------                                                <---------YAB1                           <---------ICU4                                              --------->YAB1                             --------->YAB1                                              *TSS <---------YAB1                       --------->AHL20(2)                                   <---------HSFB2a(1) ------------>CBF                 <---------AHL20(2)                           --------->ARR14(2)<---------YAB1                             --------->ICU4                           <---------ARR14(2)--------->ICU4      <------------CBF       <---------ATHB51 ->TEIL <---------ZAT6     ------->TEIL    --------->YAB1      <---------AHL20(2)   --------->AHL20(2)   catggatttagtggtatggtatgagcttgaatctggaccattcgattatgattataactcaatagtttattgattttagttgaagaataaataattacgg  24902000                                                                <<<<<<<<<<<<<<<<<LFY                                                        <------NtERF2    --------->ANAC58                                    <---------------------WRI1    --------->TGA1a                                    ------>NtERF2    --------->ANAC58                                   --------->LBD16    --------->O2                                      <---------RAP2.6(2)    <---------TGA1a                                   --------->RAP2.6(2)    --------->ANAC46                                  --------->ATERF1(2)    <---------O2          <------NtERF2       ---------->DOF2--------->YAB1 -->ANAC55(2)     <------NtERF2           <-----------GT1   <---------YAB1            <----------DOF2 ---ANAC55(2)    ------>NtERF2     --------->LBD16    <---------ATERF1(2)        <<<<<<<<<MYB2 --LBD16        --------->ANAC46 <---------LBD16     <---------LBD16           <------MYB46(1) ---GT1        --------->RAP2.6(3) ------>NtERF2     --------->ATERF1(1)       <------MYB83   actcacacgagagtctcgacggcaagtcgtcgagtcccggctaataaccaaagtagccggctatgaaaacaatggaccatttggttttctttttaaacat  24902100                                                                    <---------YAB1                                         <---------TOE2(3)          <---------TOE2(3)              <-                                         <---------TOE1(3)          <---------HSFB2a(2) --------->DAG2                                        ---------->DOF2 <-----------ARR10               <---------TOE2(3)          <---------DAG2    <---------ANAC58           <---------CCA1(2)              ---------->DOF2          <----------DOF2   <---------ANAC58    <---------GLK1(2)<---------YAB1      <---------AHL20(2)   --------->ATHB12     <----------DOF2<---------AHL20(2)      <---------ZAT6    <---------ZAT6    <-  <-------TEIL    --------->ANAC46     --------->AHL20(2) --------->TOE2(3)    ----------->GT1  <----   gtgattcatttgctttatctacaaaactttacttgcacaaattaaagttagaatttcaaatcttagtattatggaagaaaatagtattaaaaggttgttt  24902200                                                        <---------ANAC46                                         <---------ANAC58           --------->AHL20(2)  <---------YAB1                         <---------ANAC58           <---------AHL20(2) --------TOE2(3)            ----------->HVH21          --------------->AtSPL8 --------TOE1(3)          <---------At4g35610          --------------->AtSPL3---------->DOF2------>ZmHOX2a(1) -----AHL20(2) ----------->HVH21         <---------ANAC46       <---------ARR11(3)  --------->TOE2(3)   taatgttattgatatagttgacatttttagttgacacatttttgcttatgttttagtctcgtacatgattttaaatgcaaaaagaacattaatcctatat  24902300                      <------MYB83                      <------MYB46(1)                     --------->MYB59                     <---------MYB46(3)                     --------->MYB46(2)                         <---------AHL20(2)                     --------->MYB111(1)       <-----------GT1 <---------AHL20(1)                --------->ARR11(3)           <----------DOF2   --------->AHL20(1)                <---------ARR11(3)    <---------TOE1(3)        --------->AHL20(2) --------->AHL20(2)            ---------->DOF2           <---------TOE2(3)        <---------AHL20(2) <---------AHL20(2)          <---------TOE2(3)       <----------DOF2           --------->YAB1 ----------->GT1         --   tagttagagtttaagaaagatgtttggtactagttgttttaaggtttctttactctttgcaaaaataaaatttgaaaatgtgattttattttttaaaccc  24902400  Previous    Next  AGI:  At5g61960.1    Description:  AML1 (ARABIDOPSIS MEI2-LIKE PROTEIN 1); RNA binding. similar to AML4 (ARABIDOPSIS MEI2-LIKE), RNA binding [Arabidopsis thaliana] (TAIR:AT5G07290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68388.1); contains InterPro domain RNA recognition motif 2 (InterPro:IPR007201); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 24895747    to: 24901946    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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