Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------MYB52(1)    --------->GLK1(1)                                            -------      <-----------GT1            <---------GLK1(1)                       ------->TEIL       <-------- --------->GT1            --------->At4g35610                     <---------YAB1            --------- ->At5g28300         <-----------GT1                    <---------At4g35610        <---------------AtSPL8 -->GT1 <---------YAB1    ----------->RAV1(2)           --------->At4g35610  --------------->AtSPL3   catgtgaattaccattagtttgttcaccatctgagaaatccatctccgtctccatcgcttctgccattttcaatgcatttcagtacaagtacgaagatga  24881000                                                             <---------ICU4                                                             <---------AHL20(2)                                                            --------->AHL20(2)             <---------                                                         --------->ICU4                    --------->GLK1(2)                                                         <---------YAB1          <------MYB83                                                       --------->YAB1            <------MYB46(1)      <-----------GT1  --------->DAG2            --------->ANAC58               <---------TOE2(3) ---->HVH21           ---------->DOF2            --------->ANAC58  --------->TOE1(3)   --------->YAB1 -At4g35610       --------->At4g35610         <------ZmHOX2a(2)    --------->TOE2(3)  <---------YAB1 >At4g35610       <---------At4g35610  <-----------RAV1(1)--------->YAB1        --------->MYB59------   cactgaaattacaaatttggagcttaaagcgattgaaacaaatgtgggatcaagaaataataataaatacctcaaaacgaattaggttatgagaatctaa  24881100                                                                                        --------->ARR14(2)                                           --------->CCA1(2)                            <---------ARR14(2)                                          <---------ARR11(3)                            --------->ARR11(3)   --------->DAG2                 ---------->DOF2                                  --------->MYB52(1)  ---------->DOF2           <---------AHL20(2)        ----------->GT1           <---------ANAC58 --ARR10                    --------->AHL20(2)       <---------TOE2(3)          --------->ANAC55(2) --->MYB52(1)          --------->AHL20(2) --------->ARR11(3)                    <---------ANAC58   cagaaaaagcttcttgaatttcagaaaaaataaaatcaaagagagatatgtgaatgaggtaagaagagcaagaacaaaacttacttatcggatattgaaa  24881200                                                               --------->ATHB51                                                               <---------ICU4                                                         --------->At4g35610                                                      <------ZmHOX2a(2)                                                     <-----------HVH21<----------DOF2                                          <---------RVE1(1)    <--------HAHB4                                          <---------CCA1(1)    --------->ATHB12                    --                       <------ZmHOX2a(1) --------->ARR11(3)   --------->ICU4                      <--                  --------->GLK1(2)      <---------ARR11(3)   <---------YAB1          <---------At4g35610             ----------->GT1        <---------HSFB2a(2)  <---------At4g35610   <---------YAB1     <--   ccctagagacagaaattgaaaatcaggaagattgaattcgagagatatttttagcgatcagctcattattagctttcgatttttattcagataatttcaa  24881300                                                                                               ------                                                                                              -------                                                                                              <------                                                                                              *TSS                                                                                              <------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------     ------->TEIL                                                                            <-------     --------->ARR14(2)                                                                      --------     <-----------ARR10                                                                       <-------     <---------ARR14(2)                                                                      --------     --------->GLK1(2)                                                                     ----------     <---------ARR11(1)                                                           <---------At4g35610    <---------ARR14(1)                                                            --------->ZAT2    -    <---------CCA1(2)                                <------NtERF2                <---------ZAT2    - ------->TOE1(2)                                   <---------LBD16  <----------DOF2      <-----------HVH21 -------ANAC58                <<<<<<<<<TBF1    --------->DAG2       ================================= -------ANAC58           <---------GLK1(2)    ---------->DOF2 --------->At4g35610 --------->At4g35610   gcgtgcgaatctgaattgatgaagttggattcttcttcccttgttcaaaaaagtcgggagaagaagatgactttcagagaaggaagctgaaggtcacgtg  24881400    --------->ANAC58    --------->ANAC58 ----->HVH21 >MYC3 -MYC3 -----HVH21 ->bZIP60(2) --bZIP60(1) --TGA1a --ANAC58 ->ANAC58 --bZIP60(2) --ANAC46 ->ANAC58 ->TGA1a --O2 ->ANAC55(2) ->O2 --ANAC55(2)                                                                                   <----- ->bZIP60(1)                                                                                   <----- --ANAC58                       <---------ATHB12                                               <----- ->ANAC46                     --------->WOX13(1)                                 --------->ANAC58 --->DYT1 ----------->GT1   ------------>CBF                                     --------->ANAC46  <- -------->ANAC58    <---------AHL20(2)                                  <---------ARR11(1)     <----- -------->ANAC58    --------->AHL20(2)                        <---------ICU4     --------->ANAC58<--- ==bZIP_DOF        --------->YAB1               <----------DOF2        <---------CCA1(2)      -------   acaggcatggaagggaaactattaaaatgggccaattactatctaatgggccttaatggattaatactggcccaaatctataaacgaaactaatttggcg  24881500                                                                           <---------ANAC46                                                                         <-------GAMYB <---------AHL20(2)                                                     <-----------RAV1(1) ----RAP2.6(2)                                                    --------->ALFIN1               ---- ----ANAC58      ------------>CBF                                 <-----------RAV1(1)         <------ ----ANAC58     --------->YAB1                     --------->ANAC58     <----------DOF2 <-------GAMYB ---------DOF2  <-----------GT1        <---------DAG2        ---------->DOF2           <---------MYB46(3) ----ANAC46--------->AHL20(2)--------->ZAT14       --------->ANAC58   <---------At4g35610<---------MYB52(1) ---NtERF2 <---------AHL20(2)<---------ZAT14  ----------->HVH21 <---------ZAT2         --------->MYB52(2) --->ID1 <-----------TBP    *TSS       <----------DOF2      --------->AtMYB61          ------>ZmHOX2a(2)   tctttaatggtttttaaatcacaatttacagagaactggaacttttttctgacaagccgagaccaaagctggtgctgttgtggaatcgatcgttgtcttt  24881600                                                                                             <------ZmHOX2a(2)                                                <---------ANAC55(2)                         <--------                                                --------->ANAC55(2)                         ---------            <-----------RAV1(2)               <---------ALFIN1                    --------->AHL20(2)           <------ZmHOX2a(2)             <-----------GT1                   --------->At4g35610          --------->ARR11(3)   --------->ARR11(3)                          <---------At4g35610  --------->ATHB12             <---------ARR11(3)                   <------MYB83  <---------AHL20(2) ----->ATHB12               --------->DAG2 --------->ANAC46         <------MYB46(1)         <-------- ----DOF2<---------GLK1(1) ---------->DOF2 <---------ETT(1)     <---------SPL7   --------->YAB1 -----   gatttgattagagatcaggttttagagcataaagctcttaattttgcgacacttatctcatttcggtgttcggtttcagctaattttaatcgaagatcat  24881700                                                                      --------->MYB59                                                              <------MYB83                                                              <------MYB46(1)                                                              ----------->GT1                                                             --------->MYB59                        <                                                          <---------ARR14(2)                        -  <----------DOF2            <---------YAB1              <------ZmHOX2a(1)                  --------- ---ARR10                  --------->YAB1--------->CCA1(2)--------->ARR14(2)                <-------- >ARR11(3)    <---------TOE1(3)     <------ZmHOX2a(1)  <---------TOE2(3)             <---------ANAC58 -ARR11(3)   <-----------RAV1(2)    --------->YAB1     <---------TOE2(2)             <---------ANAC58 ---->At4g35610   <-------TEIL    <---------TOE2(3)    <---------TOE1(2)         <---------MYB52(1) -   ctctctttgtgaatttcaggttcgtccaattgtgataaggatgatataagggtttcttaggatttggtaaattgggtcttgttgttagcttgagaatcta  24881800                                                         --------->GLK1(1)                                                        --------->ARR14(2)                                            <---------TOE1(1)                                           <-------TEIL <---------ARR14(2)                                          --------->ARR14(1)                                          --------->CCA1(2)                                         --------->ARR14(2)                                         <---------ARR14(2) ---------ANAC55(2)                      --------->ARR11(1) -------->ANAC55(2)                      <---------ARR11(3) >GLK1(2)  <----------DOF2             ----------->ARR10<---------GLK1(2) ---ARR10------>ZmHOX2a(1)   --------->STY1(2)    --------->ETT(2) ---------->GT1              <---------STY1(2)    <---------ETT(2)                  <---------YAB1   attcgtaattcctctttctgggttttcttctagctcgtgtcaagatacgatgtctacagatttgccattgtcttcgattactcaatctcattgcatagat  24881900  Previous    Next  AGI:  At5g61910.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68695.1); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Development and cell death (InterPro:IPR013989); contains InterPro domain Protein of unknown function GLTT (InterPro:IPR008165) Range:  from: 24877883    to: 24881394    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g61920.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14750.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62085.1) Range:  from: 24881528    to: 24883245    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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