Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <-----------HVH21                                 --------->TGA1a                                 --------->ANAC46                                 <---------O2                       ----------->HVH21                       --------->TGA2(2)                      <-----------TGA1                     <---------TGA2(1)                     <---------TGA1a                     --------->TGA1a       <-------MYC4  <---------ANAC58       ------->MYC4  <---------bZIP60(2)       <-------MYC2  --------->ANAC58       ------->MYC3  --------->bZIP60(2)       ------->MYC2  --------->ANAC58       <-------MYC3  <---------O2<---------TGA1a      --------->ANAC55(2)        --------->bZIP60(1)      =========================bZIP_bZIP      --------->TGA1a======================bZIP_bZIP      <--------ABF1  --------->TGA2(1)      <---------ANAC55(2)   --------->ZAT14      --------->O2   <---------ANAC55(2)      <---------TGA1a--------->O2--------->O2      <---------O2   <---------bZIP60(1)                                                <------MYB46(1)      <---------ANAC46<-----------HVH21                                                 <------MYB83  <-----------HVH21  --------->ANAC55(2)                                         --------->YAB1 ----------->HVH21   <---------ANAC58                                            <---------ICU4 --------ANAC58      --------->bZIP60(1)                  ------>ZmHOX2a(1)     <---------ATHB12 --------ANAC58     ----------->STF1        --------->ANAC58               --------->ANAC58     ----- ------->ANAC55(2)  <-----------STF1        --------->ANAC58               --------->ANAC58   ------- --------ANAC55(2)----------->TGA1<-----------TGA1     ---------->ID1      --------->ANAC46  <------- --MYB52(1)       ----------->HVH21         --------->ANAC46        <-----------GT1<---------YAB1 >TOE2(3)--------->REM1(2) --------->DEAR3(1) <---------MYB52(1)   <---------AHL20(2)  --------->MYB59   tacgtgacacgtgtaaaccagtgacgtcaccgctctcgtcacaaacccgctagtattgtcctcttctattttatctcacacaatcatgttaggttatcat  24854100                                                     --------->AHL20(2)                                              ------>NtERF2                                          ------->GAMYB                                          --------->DEAR3(1)                                          --------->TOE2(2)                                         <---------MYB55(2)  --------->ZAT6                         --------->DEAR3(2)                           --------->AHL20(2) ---------->AtSPL8                       --------->MYB46(3)                           <---------AHL20(2) -->YAB1                               --------->MYB52(1)              --------->CCA1(2) --YAB1                     ----------->GT1  <---------ETT(2)  ---------->DOF2    --------->AHL20(2)   agtaccactaaacatttatgtgagaatggatggatattagacaaccgacgacaaataaaacaaacaaaagtagatagacgaccataaattaaactataaa  24854200                            <---------ARR11(3)                            --------->ARR11(3)                            <---------GLK1(2)           <-----------GT1                 --------->ATHB12           ----------->GT1                                     -----                 -------->ATHB1             <---------ANAC46                        <---------ANAC46<                 <---------ICU4             <---------ANAC58                  <---------AHL20(2)-----                <---------YAB1            --------->ARR11(3)                 <---------YAB1     <----        ----------->GT1   ----------->ARR10 <---------ANAC58                 --------->ICU4    <-----   cgaagattgagggaaaaaatcattggtttagattttcgaacaaatatcgtgaaaagtttttcatcttgtagtttttgtaattaatggtgtatgaaaaatc  24854300                             <---------DOF5.7(2)             <---------ARR11(3)                             --------->MYB52(1)          --------->YAB1                            <---------WRKY12             ---------->DOF2                      >>>>>>>                            <---------ZAT14             <---------ATHB12                      >>>>>>>                            --------->ZAT14         <---------ATHB12                          >>>>>>>                  <---------AHL20(1)               --------->ANAC58                           >>>>>>> --->ATHB1        --------->AHL20(2)               --------->ANAC58                      <---------ANAC46 ---------MYB46(3)--------->AHL20(1)               --------->ANAC46                     <---------MYB46(3) ---->ATHB12      <---------AHL20(2)              ------>MYB83--------->CCA1(2)         <-----------RAV1(1) -----ICU4       --------->AHL20(2)               ------>MYB46(1)                      <---------ANAC46 ----YAB1        <---------AHL20(2)           ------->TEIL   --------->ARR11(1) <---------ANAC46   attggtttgtttagttgaattaaatttcagtaaacggtttagagtatgaacccactcaataaagatttgactgccaagcgttactggtgtctggtggatt  24854400                                                                           --------->At4g35610                                                                           <---------At4g35610                                                                     --------->TOE2(3)                                           <---------TOE2(3)    <---------ICU4                             <-----------RAV1(1)               <---------AHL20(2) ----------->GT1          --------->ICU4  ---------->DOF2      --------->AHL20(2) >>GATA-1                 <---------MYB52(1)               <---------AHL20(2) >>GATA-2        --------->ALFIN1       <---------YAB1     --------->AHL20(2)----------->HVH21 >>GATA-3     <---------TOE2(3)      <---------YAB1 --------->ARR11(3)  ---------->DOF2 >>GATA-4     <---------TOE1(3) ----------->GT1     <---------ARR11(3)------>ZmHOX2a(1)          ----   gaatagttaagagtataaggtttgggccattatgtggtttttattaaagttgaaggtctcatttattaattccttagagctgatggctaatgtacaacga  24854500                                        --------->O2                                   --------->ANAC46                                   --------->ANAC58                                   --------->ANAC58                                   --------->ANAC55(2)                            *TSS   <---------ANAC55(2)                           --------->ANAC46                           --------->ANAC58                           --------->ANAC58                        --------->SPL7  ===========================================bZIP_DOF                        <---------ZAT18 <---------TGA1a                        --------->ZAT14 --------->TGA1a                    --------------->AtSPL8                    --------------->AtSPL3                    --------->ANAC46    <---------O2                    <---------------AtSPL8   <---------------------WRI1                  --------->MYB52(1) ----------->HVH21        <------ZmHOX2a(1)<---------ALFIN1------>NtERF2     <-----------RAV1(2)<-------TEIL --------->ANAC46                                         ------- --->TEIL       --------->CCA1(2) --------->TOE1(2)                     ---------->DOF2  ----------->GT1   atttgattcaggagtaagataaacggtacacccaaacacgcgacgcgagcgaagaagacgatgacgaacaaggagaaagctcgagagagaagggagaaaa  24854600                  ------>ZmHOX2a(1)          ===============HOX2a_HOX2a          ============================HOX2a_HOX2a          ------>ZmHOX2a(2)         =============================HOX2a_HOX2a         --------->GLK1(1)         <------ZmHOX2a(2)         ================HOX2a_HOX2a                                                                <        --------->ARR14(2)                                                                          -        --------->ARR11(3)                                                                      =====        <---------ARR14(2)                  --------->AtMYB61                                   -----        <---------ARR14(3)                ----------->RAV1(1)                                  ------        <---------ARR11(3)              <-----------------AGL1                                 ------       --------->GLK1(1)                --------->MYB46(3)                                     ------       <---------GLK1(1)             ----------->HVH21               ---------->ID1        <---------CCA1(2)     <------ZmHOX2a(1)         ------>ZmHOX2a(1)               ------>MYB46(1)         <----------DOF2  <-----------RAV1(2)         <---------ANAC58                 ------>MYB83         <----------DOF2 < --->DOF2<---------GLK1(1)    <---------ANAC58               <---------MYB59    <---------RAP2.6(2) -   gaatgcaggagatctctctccttcgaactattccttactctgaccaccataggtatgaagagacctaatttgtccaattgtttcggcttctttgtatcct  24854700         <---------ICU4        <---------YAB1      --------->YAB1   --------->WOX13(1)  ------>ZmHOX2a(2) <------ZmHOX2a(2) ---------AGP1 -------->ARR11(3) ========HOX2a_HOX2a ->ZmHOX2a(1)                        --------->ANAC46 --->TOE2(3)                       <-----------GT1 --->TOE2(2)             --------->GLK1(2)                             <---------ANAC46 --->TOE1(2)            --------->ARR14(2)                             <---------ANAC58 ---------ARR11(3)      <---------GLK1(2)                              <---------ANAC58     <-------- -------->AGP1          <---------ARR14(2)       ----------->GT1 <-----------GT1         <-----------RAV1(1)   aagatctatcatcatttactctgcgagattctcaatttcacagcattcgatgtgttaatctctaatttcacttgcttaaatccatttcttagtgtcgctt  24854800                        <---------------AGL15                        --------------->AGL15                            --------->ARR14(2)                       <-----------------AGL1                            <---------ARR14(2)                       <-----------------AGL3                            <---------GLK1(2)                       <-----------------AGL2                 <------MYB83                       <-----------------AG                   <------MYB46(1)                --------                       <-----------GT1                      <---------ANAC46         --------->ANAC46                     <-----------GT1                      <---------MYB46(3)       <-----------GT1 -ANAC46     --------->GLK1(2)     <-------GAMYB       <-----------RAV1(1)         --------->ZAT6   acagtgtttgatgagtttctatttttctctatttgggagttggagactgaattggtattgttgttggtacttacagatttgtgtttcactaaaccaaaag  24854900                                                                                           <---------AtMYB61                                                                                         <---------MYB46(3)                                                                       <------NtERF2    <---------DEAR3(1)                                            <---------DAG2            <-----------HVH21 <---------AtMYB61                                            <----------DOF2  <---------YAB1             --------->ALFIN1                 --------->YAB1      --------->ANAC58    <---------ANAC58            <---------TOE2(3) -->DOF2        --------->ICU4       --------->ANAC58    <---------ANAC58   <---------ATHB12     ----   aatttagagaaattgaaaatgatgaagtatgtgtctctcaagccctctttttgaatttgacttgtcattaggcgtcaaatgattttttaggtggtggtct  24855000  Previous    Next  AGI:  At5g61830.1    Description:  short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G51030.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79560.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 24854528    to: 24856196    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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