Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  ---                                                                                                  ---                                                                                                <----                                                                                               <-----                                                                                         <--------P                                                                                      --------->HSFB2a(2)                                                                                    ----------->RAV1(2)                                         --------------->AtSPL8                  <---------HSFC1(2)       >>>>>>>>>>>>>>>>>LFY           --------->GLK1(2)                          --------->HSFB2a(1)       ------>NtERF2                  --------->ARR11(3)                         --------->HSFC1(2)      <---------ETT(2)          ----------->GT1        <---------ARR11(3)    --------->ANAC46--------      --------->ETT(2)        <---------ANAC46         --------->ARR11(3)    --------->ANAC58--------   <-----------RAV1(1)        <---------ANAC58       --------->ANAC58        --------->ANAC58<------- --At4g35610                  <---------ANAC58       --------->ANAC58--------->ANAC46 ------>ZmHOX2a(1) ->LBD16<------NtERF2  <---------YAB1 <---------ARR11(3)  <----------DOF2 <----------ID1<---------MYB52(1) ->At4g35610          <---------ARR11(3) <---------------AtSPL8      --------->AtLEC2 <---------HSFB2a(2)   gacaaatgtcgccattgtgttcaatatcaatggcctgaaaaatcttgtacaactcaagctctttagcatccatgtaacgacgaaactcctggtagtccac  24850700                                                                                                  <--                                                                                                <----  <---------ALFIN1                                                                        ------>ZmHOX2a(2) ------>ANAC46                                                                          <---------ARR14(2) ------>ANAC58                              ------->TEIL                                <---------AGP1 ------>ANAC58                            <---------ZAT18                               --------->ARR14(2) -----ALFIN1                              <---------SPL7                             --------->HSFB2a(2) ----REM1(2)                             <---------ANAC58                            <---------HSFB2a(2) ->ZAT18                                 <---------ANAC58  <------ZmHOX2a(1)        <---------------- ->ZAT14                    <---------TOE2(3)       <----------DOF2                 <---------------- --ZAT18                <----------DOF2 --------------->AtSPL3                   <----------DOF2-----   acgcccatctcgattcgagtcgcagactttaagaaaatcactagcgtacctatactttggaggaatactaagcgaagacaaacctttctcgatctgggta  24850800                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              -------                                                                                             --------                                                                                            <--------                                                                                           ------>MYB46(1)                                                                                           ------>MYB83                                                                                           -------->P                                                                                          -----------                                                                                         --------->AtMYB61                                                                                         --------->MYB46(3) -------ANAC46                                          ------>ZmHOX2a(2)               --------->MYB46(3) -----ARR14(2)                                         --------->GLK1(1)                <---------MYB52(2) -AGL1                                                <---------ARR11(3)               ------>NtERF2 -AGL2   --------->TOE1(3)                          ------>ZmHOX2a(1)         --------->ANAC55(2) ---->ARR14(2)                                  <---------ARR14(2)            --------->YAB1<--------   tcgtctaagaaccctaacttcgaattgtcgaagaattcgaacagtttttgaatcctgatctctctcttctccttggtctctcgtaatgccaccaacacgt  24850900    <-----------RAV1(1) ->MYC2 ->PIF4 --PIF5 ->MYC4 --MYC4                              <---------ANAC58                      <---------ATHB12 --MYC3                              <---------ANAC46                    --------->WOX13(1) ->MYC3                              <---------AtLEC2                  <------ZmHOX2a(2) --MYC2                              <---------ANAC58                ------->GAMYB --PIF4   <----------DOF2      <---------ARR14(2)                  <---------TOE1(3) ->PIF5  <---------ANAC58      --------->ARR14(2)                  <---------TOE2(3) ---ANAC55(2)                  <---------GLK1(2)              <---------MYB46(3) -->ANAC55(2)               --------->LBD16--------->GLK1(1)<---------ANAC58           <---------At4g35610 ---->OsbHLH66              --------->ANAC46                <---------ANAC58     --------->GLK1(1) ----OsbHLH66 <---------LBD16--------->LBD16         ------>NtERF2--------->MYB52(1)   --------->At4g35610 >RAV1(1)<---------ANAC58  <---------LBD16 <---------GLK1(1)<---------ANAC46 <---------HSFB2a(2) -ALFIN1 <---------ANAC46-------->P<---------YAB1 ------>NtERF2   <---------DOF5.7(2)<-----------RAV1(2)   gctccattgttgcttctacgggcttcttacccggattttgcttggatttctctgcctccattgctggttaacgatcaatcgagaaacccagatgagcaaa  24851000                                                                                 --------->YAB1                                                                              --------->YAB1                                                 <---------YAB1       <---------LBD16       <----------DOF2                   --------->PCF5           <---------GLK1(2)    --------->YAB1  ---------->DOF2                --------->GLK1(2)            ---------->DOF2--------->ICU4--------->GLK1(1)   attggaaagctttcaagtttcaacagttttggacgattctatggtcccttcattcttggaagaaaaaagaatttcggaaataatcaaaatcagaattcaa  24851100                                                          <---------ARR11(3)                                                          <---------ARR14(2)                                                          --------->ARR14(2)       --------->At4g35610                                                 --------->At4g35610               --------->ZAT2                                            <---------DEAR3(2)                     ----------->RAV1(2)                                            <------MYB46(1)           --------->HSFB2a(1)                                            <------MYB83  --------->ARR11(3)       <---------ZAT2  <-                                           <---------MYB46(3)        <---------ARR14(2)           <--                                           <---------DEAR4(1)        <---------ARR11(3)          ----       --------->AHL20(2)                  <---------DREB2C(2)       --------->ARR14(2)          <---       <---------AHL20(2)                  <---------DEAR3(1)        --------->ARR11(3)          ----      --------->AHL20(2)                   --------->MYB46(2)       <---------CCA1(2)           -----      <---------AHL20(2)                  <---------ORA47(1)    --------->TOE2(3)  <---------At4g35610      --------->AHL20(1)               <---------TOE2(3) --------->CCA1(1)   --------->AtLEC2   <----      <---------AHL20(1)    *TSS   --------->CCA1(2)     --------->RVE1(1) <---------AtLEC2  --------   aaatgaaatttatttggacaaaacttttgtctctgagatttgaggtcggtgagcaaaaaatatctgcctcaaatcttccatggacagctggagtctccat  24851200        <---------PCF5       --------->WRKY38(1)       --------->WRKY12       --------->WRKY45    <---------ANAC58    <---------ANAC46    <---------ANAC58 --------YAB1 ----------CBF                           --------->ANAC58 ----->ATHB51               ----------->RAV1(1) ------ICU4                --------->ANAC46 ---->ATHB1    --------->YAB1            --------->ANAC46 ---->ICU4   --------->ANAC58            --------->ANAC58 -----YAB1   --------->ANAC58       ----------->HVH21           <-----------GT1 ---->ATHB5<---------ALFIN1<---------ETT(1)            <-----------HVH21       <---------ANAC46   tattgttcgtggaccactcaaaactgtttccgacatatatgacacacaaaaaacaccagtcaaataaaaccggtctagtttgagtgaatcacagcaacga  24851300                                                      <---------ZAT14                                           <-------GAMYB       --------->At5g28300                                       <---------LBD16--------->ZAT14                  --------->ZAT6                                     <---------ARR11(3)       ----------->GT1      <---------MYB52(2)                --------->At4g35610  --------->ARR11(3)      <---------ANAC46      <------------MYB.PH3(2)                <---------At4g35610  <XXXXXXXXXXXXXXXXXXXXMIR869.1---------->DOF2  <---------MYB59        <---------LBD16              <---------ARR14(2)   ----------->HVH21      <-----------GT1      <-----------GT1<----------DOF2 --------->ARR14(2)   ----------->TGA1    --------->YAB1   gtcagttttcaccggtttagctgctttgaacgagaacaatatctgggttgaaccagaacagtgacggtaaaagtttttttttataactaactctagtaac  24851400                                                                                                  ---                                                                            --------->YAB1        <--                                           --------->At5g28300       <---------ZAT6               ---                                          ----------->GT1            ----------->GT1             ----        <----------DOF2      <---------At4g35610                <---------REM1(1)           ---------   tgaatatcaacttttgaatttttgatcatacagatgattttagacagtgaaacatcacaaatttggatgtagagtaattcataagttatagagattaaaa  24851500                                                                <---------ANAC58  --------->YAB1                                   <---------YAB1  ----------->GT1                                 <---------TOE2(3)                           <------ ------>AHL20(2)                              --------->YAB1    <---------ANAC46              ------- -------AHL20(2)    ---------->DOF2        ------->GAMYB        <---------ANAC58            --------- ------>AHL20(1)  <---------YAB1        --------->MYB52(1)<---------AHL20(2)         ---------->DOF2 ----->AHL20(2)--------->ICU4       --------->ANAC58   --------->MYB52(2)     ------->TEIL---------->DOF2 >AHL20(2)  <---------AtLEC2        --------->ANAC58--------->TOE2(3)      <---------ANAC46--------->DAG2   aaaattgtaattttgcaagtattaaagggtttggaaccaagacaacgaaaataatgttagtttattgtgtgaatgtgatgtatttgagaaagaaaagttc  24851600  Previous    Next  AGI:  At5g61810.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G51050.1); similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G07320.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83157.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68405.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier prote Range:  from: 24848845    to: 24851128    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g61820.1    Description:  similar to MtN19-like protein [Pisum sativum] (GB:AAU14999.2); contains InterPro domain Stress up-regulated Nod 19 (InterPro:IPR011692) Range:  from: 24851543    to: 24853920    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version