Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->ANAC58                         <---------ARR14(2)                             ------       --------->ANAC58                         --------->ARR14(2)                      <---------At4g35610 <---------ARR14(2)                          --------->HSFB2a(2)           --------->ARR14(2)  ------ ---->ANAC58                           <----------DOF2                     <---------ARR14(2)  ------ ---->ANAC58    <---------MYB52(1)     <---------DAG2        --------->GLK1(2)     --------->ARR14(2) --->DOF2      ------>ZmHOX2a(1)      <----------DOF2        <---------ARR11(3)    <---------ARR14(2) ->WRKY18(1)   <----------DOF2        <---------DAG2         --------->ARR11(3)   --------->GLK1(1)   gcagaaatgaagcaatcctttagggaagacaaaaacatcgcctttttgcagaaccgtttgaaaaatcttgttgttagtatccacaaatccagcaaacacg  24830300                                                          <---------ANAC58                                                          <---------ANAC58                                                         <-------TEIL                                   --------->ARR14(2)    ------>ZmHOX2a(2)        --------------->AGL15      <---------ARR14(2)   <------ZmHOX2a(2)         ----------->HVH21     <---------WRKY18(1)        --------->TOE2(1)      <---------ARR14(2)      <-----------HVH21    --------->WRKY12            --------->TOE1(1)      --------->ARR14(2)     <---------ANAC55(2)    --------->WRKY38(1)        <---------LBD16         --------->AGP1         <---------ANAC58    --------->WRKY45    <---------At4g35610            <---------GLK1(2)      <---------ANAC58  <----------DOF2       --------->At4g35610          ----------->ARR10  <------ZmHOX2a(2) --->ANAC58           <-----------RAV1(2)      --------->ANAC58        --------->ARR11(3) --->ANAC46        --------->At4g35610         --------->ANAC58        <---------ARR11(3) --->ANAC58---------->DOF2----------->HVH21   --------->SPL7    <----------DOF2--------->LBD16      -   actcctttgaccacaaagagcatctcagatgacctcggatgcgaatggaacggcacagatccgtccctttcaagatcagtccgtgagaccgagaggccaa  24830400                                                                                        --------->ZAT18                                                                                        <---------ZAT18                                                                                     <------MYB46(1)                                                                                     <---------ANAC46                                                                                    --------->MYB111(2)                                                                                    --------->MYB55(2)                                                                                    --------->MYB46(2)                                                                              <---------MYB52(1)                                                                            <---------HSFB2a(2)                                                                ------->TEIL--------->HSFB2a(2)                                                                <---------ARR14(2)  --------->MYB111(1)                                                                --------->ARR14(2)  <---------MYB46(3)                                    ----------->HVH21          <---------CCA1(2)    <---------AtMYB61         <---------LBD16    <---------ZAT18          <---------YAB1     <---------GLK1(2)       <---- <---------ZAT14       --------->ZAT14               --------->ICU4    <---------At4g35610      ----- -------->ALFIN1       <---------ZAT14              <---------ARR11(3) <---------ZAT2<------MYB83  --   gagtgttgagacctggaaactctaatgcagtgagcaatgtgacattcgactggagataattgtctgtatctccagcttctgtaagtttggtggacttgaa  24830500                                                                             <---------PCF2                                                                            ----------->HVH21                                                                         --------->LBD16                                                                        <---------TGA1a                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                        <---------ANAC46                                                                        <---------O2                                                                       <-----------------------TaNAC69(2)                                                                       <------NtERF2                                                                       --------->ATERF1(1)                                                                      ------>NtERF2                                                                     <---------ARR14(2)                                                                     --------->ARR14(2) ------>ZmHOX2a(1)                                                                   --------->LBD16    <---------ANAC58       --------->At5g28300            <---------MYB46(3)          --------->LBD16 ------->MYC3      ----------->GT1             --------->GLK1(1)               --------->HSFB2a(2) <---------ANAC46    --------->At4g35610         --------->YAB1                    <---------HSFB2a(2) <---------ANAC58 ------>ZmHOX2a(1)          <---------AtLEC2                      --------->ANAC46<-------MYC3 -----GLK1(1)           <---------ANAC58                         <---------LBD16 --------->O2 ---->GLK1(1)           <---------ANAC58<---------MYB52(1)      <---------LBD16  <---------O2 --------->RAV1(2)--------->ETT(1)<---------GLK1(1)        --------->ZAT14--------->ALFIN1   atcctgagcggtaatcttggtcgggttcttgcaaggatagccgttgatgaagaagatgctctgttctcccggagccgtgggacatgtgtcctgcatattg  24830600                                                                   --------->ICU4                                                   --------->ARR14(2)        --------->LBD16                            <---------ARR11(3)                        <-------      <---------LBD16                   <------ZmHOX2a(2)       <---------YAB1      --------->ANAC58  <---------ARR14(2)          --------->ANAC46     <---------ARR14(2)            --------->ZAT14  <--  --------->ARR14(2)       --------->ZAT18         --------->ARR11(3) <---------YAB1--------->ANAC58   tccgaatccccagagacagataagaagattgcacaaaacacgatcacgacgaagaacttcatccttgtgattatgttacgaagagtactcaacttgtcat  24830700                                                                         <---------ZAT18                                                                         <---------ZAT14                                                                         --------->ZAT14                                                                      <---------ANAC58                                                                  <-------GAMYB                                                            <---------ANAC46                                                            <---------ANAC58                                                            <---------ANAC58                     ---------->DOF2                   --------->ALFIN1  --------->ZAT18                    <---------AHL20(2)                 <---------O2   <---------ANAC46            ----------->GT1                            <---------bZIP60(2)--------->ZAT6       <---------AHL20(2)        --------->AHL20(2)    --------->O2   <---------ANAC58 --YAB1--------->AHL20(2)  <----------ID1       --------->HSFB2a(2)  <---------------AtSPL8         - ---------GT1       --------->AHL20(2)          <---------HSFB2a(2)  --------------->AtSPL8       <--   taaccagatttaaacagaaaatttaaagaaggccaaaaaatactctgtttctaggcgatgtggcttagggttgagtacactacttagtggcattttgagt  24830800                                                                           <-----------GT1                                              <---------GLK1(2)         <---------ICU4           <---------TOE1(3)             <-----------GT1               <---------YAB1           <---------TOE2(3)       <---------AHL20(1)         <---------TOE2(3) -------->ARR11(3)                 --------->AHL20(1)     <------------CBF<---------YAB1 -------YAB1----------->GT1       --------->ICU4 <-----------GT1       --------->ICU4  <---------ARR11(3)   aagattatgttctaaggtgaaaatcgcttctaagtaatatttttcactgattttccaacttattgatgttgacattattacttcttcaagctctaattct  24830900                                       <------ZmHOX2a(1)                                      --------->ANAC58                              =======================================================================                              ----------------->AGL1                              <-----------------AGL3                              <-----------------AGL2                ------------>CBF      --------->ANAC58              <---------ANAC58               --------->ANAC58       --------->ANAC46              <---------ANAC58               --------->ANAC46<---------------AGL15               --------->At4g35610           ---------->DOF2<----------DOF2                          <---------At4g35610            ---        --------->TOE1(3)<---------ANAC58                   ------->GAMYB                  --------->AHL20(1)        --------->TOE2(3)<---------ANAC58      ---------->DOF2 --------->TOE2(3) ------->TEIL     <--       <-----------------AGL1 <-----------------AGL1     --------->MYB52(1) --------->YAB1 <---------ARR11(3) <---------YAB1--------->ANAC58--------------->AGL15  --------->TOE1(3)  <----------DOF2   <---------AHL20(1)   attctgtttacctgaaaacgcaattttgctttgctataacaggaaaccaaaaagaagcttaactgccttagcttactttcatgaaactctcgatatattt  24831000                                                                                   --------->ANAC58         ----------->GT1          --------->AHL20(2)                               --------->ANAC58       ---------->DOF2     <---------TOE1(3)                                       --------->ANAC46    --------->YAB1         <---------TOE2(3)                             ------>MYB46(1)<----------ID1 =============MADS_MADS   --------->MYB52(1)              <-------TEIL   ------>MYB83---------->DOF2 ------------>AGL15       <---------DOF5.7(2)   <----------ID1         <---------MYB59  ----------->GT1 -------------AGL15     --------->DOF5.7(2) ---------->DOF2           --------->ANAC46 ----------->GT1   ctctaatgagaaagtacaatggtttagttaacgaaattatacaattgaaagggacaaacgttcatgtccaaaacccaactagtccaagaaaggaaaaact  24831100                     <------NtERF2                    --------->LBD16                   <---------LBD16                                              <---------ANAC58                   <---------ANAC46                              --------->MYB52(1)                  <---------LBD16                              <---------HSFC1(2)        ------->GAMYB                  --------->ATERF1(1)      <---------ZAT18     --------->HSFC1(2)<----------DOF2    -                  <------NtERF2 --------->HSFC1(2)<-----------------AGL1        <---------ANAC58    -   tggagattatttgaaatggagccgggaagaacgacgtttctctagcgcccgttctcaagtagggaagtatcggtttcatcgtgcttttcaacgctctgaa  24831200  Previous    Next  AGI:  At5g61750.1    Description:  cupin family protein. Identical to Germin-like protein subfamily 3 member 4 precursor [Arabidopsis Thaliana] (GB:Q9FLT3;GB:Q1PDG6); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39150.1); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48658.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Germin; (InterPro:IPR001929); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051) Range:  from: 24830030    to: 24830662    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g61760.1    Description:  ATIPK2BETA (Arabidopsis thaliana inositol hexakisphosphate 2beta); inositol or phosphatidylinositol kinase. similar to IPK2a (INOSITOL POLYPHOSPHATE KINASE 2 ALPHA), inositol or phosphatidylinositol kinase [Arabidopsis thaliana] (TAIR:AT5G07370.1); similar to IPK2a (INOSITOL POLYPHOSPHATE KINASE 2 ALPHA), inositol or phosphatidylinositol kinase [Arabidopsis thaliana] (TAIR:AT5G07370.4); similar to IPK2a (INOSITOL POLYPHOSPHATE KINASE 2 ALPHA), inositol or phosphatidylinositol kinase [Arabidopsis thaliana] (TAIR:AT5G07370.3); similar to putative inositol polyphosphate kinase [Thellungiella halophila] (GB:ABL11220.1); contains InterPro domain I Range:  from: 24830955    to: 24832669    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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