Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->TOE2(3)                                          <-----------------AGL1    ------>ZmHOX2a(1)                     --------->ANAC46    --------->HSFB2a(2)                  -------->P                                                 <    --------->LBD16                      ------->TEIL                                               -    <---------HSFB2a(2)              ------->TEIL                                               <----   <---------LBD16                  <---------CCA1(2)                                          ------  ----------->RAV1(2)        --------->ANAC58                         --------->TOE1(3)   <---------ALFIN1 ----->DOF2                  --------->ANAC58                        ----------->RAV1(2)----------->RAV1(1) >AGL15                    --------->At4g35610                       ===============================RAV -AGL15                    <---------At4g35610                      ------->TEIL    --------->ARR14(2) --AGL1               ----------->HVH21 <-----------GT1      --------->MYB46(3)     <---------ARR14(2)   aagctcctggaacttgcaagggatgtgacagaagccatgtatctacctcatcaggctccttgaacgactgaacctgaacaacatcgaatccaacacatta  24810300                                                   <------MYB46(1)                                                   <------MYB83                                                 <--------P                                                <---------ANAC58                                                <-------GAMYB                                                <---------ANAC58                                               --------->ATHB12                                               <---------MYB46(3)                                               <------MYB83                                               --------->MYB55(2)   --------->TOE2(3)                           <------MYB46(1)                  --------->ATHB12   ------->GAMYB                               --------->MYB52(2)               --------->ATHB51 <---------At5g28300             ----------->GT1<---------ANAC46      <---------MYB46(3) -----------GT1               <---------ATHB12<---------AtMYB61  --------->LBD16<---------ICU4 -------->MYB52(1)        --------->MYB46(3) <XXXXXXXXXXXXXXXXXXXXXMIR833-3P   <---------ATHB51 -----AHL20(2)    --------->MYB52(1)         <--------P         <---------LBD16<---------YAB1       - --->AHL20(2)   --------->MYB46(3)     --------->ARR11(3)       --------->LBD16--------->ICU4 <------   aataaccgtagaaacttaaccaagggaaaccaatgaagtaataccttgttggttggaattggtctccctggattgttagccataattgcagagacgatat  24810400         ------>NtERF2        --------->DEAR3(1)       <------NtERF2       --------->ATERF1(1)                                                             <------NtERF2       ------>NtERF2           ---------->DOF2                                        <---------MYB46(3)       --------->RAP2.3(1)  --------->ANAC46                     ---------->ID1 --------->GLK1(2)      <---------ATERF1(1)   --------->ANAC58           ---------->DOF2         <---------ARR14(2)     <---------DEAR3(1)     --------->ANAC58    --------->HSFC1(2)       --------->ANAC46  --------->GLK1(1)    <---------LBD16      --------->ZAT14        <---------HSFC1(2)       --------->ANAC58 <---------ARR14(2)   <---------bZIP60(2) --------->ANAC58         --------->At4g35610      --------->ANAC58 --------->ARR14(2) ---------->DOF2       --------->ANAC58         <---------HSFB2a(1) ------>ZmHOX2a(1)--------->ALFIN1 ---------->HVH21      --------->ANAC46    --------->ANAC58<---------ARR11(3) <---------HSFB2a(1)   < ---GLK1(1)          <---------ALFIN1      --------->ANAC58--------->ARR11(3) <---------HSFC1(2)    <   cagtaacgcggcgactattgttcccactccacacaaagtcatagcaaggaagcttcacaaagaacttgtcctcacaaggaagaatcggtggggataccaa  24810500                                                <----------DOF2                                       <-----------HVH21                                      <---------ANAC58                        --------->ANAC58       <---------ANAC58                        --------->ANAC46       <---------ANAC58                <---------YAB1       <-------TEIL             --------->ARR11(3)    <---------ARR14(2)            --------->YAB1         --------->ARR14(2)       ==================================HOX2a_HOX2a    <---------ANAC58       <------ZmHOX2a(2)--------->ANAC58   <---------ANAC58     <------ZmHOX2a(1) <---------ZAT18<---------ANAC58  <---------ANAC58 ---------REM1(1)  <---------------AtSPL8  <---------ANAC58  ------>ZmHOX2a(1)   <------ZmHOX2a(1) ---------ZAT6  --------->GLK1(2) <------ZmHOX2a(1)<---------AtLEC2  ---------->DOF2    >>>>>>>>>TBF1   tagtgtaggatcagtgatattcttgtacgcactcgaggatgcgtcgcttgctttcatggcttcctctatacaaaagatgagaaggatgaagaagaatgaa  24810600                --------->ALFIN1               <-------MYC3               ------->MYC3               -------->ABF1               <-------MYC2               ------->MYC2               ------->MYC4               ------->PIF5               <-------MYC4               <-------PIF5              >>>>>>>>>>AtMYC2              <---------O2              --------->O2              <---------ANAC55(2)              --------->TGA1a              >>>>>>>>>>ABI5              <---------TGA1a          --------->ANAC58             --------->ZAT14              --------->ANAC55(2)      --------->ANAC58             <---------ZAT14              ==================================bZIP_DOF          --------->LBD16              <---------bZIP60(2)    ---------->DOF2              --------->At5g28300              >>>>>>>>>>HY5        --------->AtLEC2            ------->GAMYB    --------->CCA1(2)          --------->LBD16                --------->ANAC46   --------->ARR14(2)          ------>NtERF2                  --------->DEAR3(1)                   --   <---------ARR11(3)         --------->ANAC58         --------->LBD16<---------At4g35610  --------->ANAC58   --------->ARR11(3)         --------->ANAC46        --------->HSFB2a(2)     <--------P<------NtERF2   <---------ARR14(2)         --------->ANAC58        <---------HSFB2a(2) <---------ANAC46 --------->ANAC58 ----------->ARR10           <---------LBD16   <---------GLK1(2) <---------ANAC46    --------->At4g35610   gagaagatttgaagacacgtggctctcttgttccgccatgaaagcaatagattcttcccgaacaacgccgtgaactgctggtagagaagcggcaagcctt  24810700         --------->ICU4         <---------YAB1               <----------DOF2                               <---------AHL20(2)       --------->YAB1          <---------ARR11(3)                                   --------->AHL20(2)       <---------ICU4          --------->ARR11(3)                          --------->ANAC58      <---------ATHB12         --------->GLK1(2)       <---------ANAC58    ----------->GT1      --------->ICU4          --------->CCA1(1)        <---------ANAC58    --------->ANAC58     <---------ARR11(3)       --------->RVE1(1)    <------------CBF       --------->DAG2      ------- ------->AtLEC2             --------->AHL20(2)----------->GT1            ---------->DOF2     --------   cttgcaaaatcattatcaagttttttaaaaaaaaatctttctttttcgaagtaaattgtttgtcttagaaaaaaaaaaagcaaaattttaatctataaag  24810800       --------->ANAC58            <---------AHL20(2)       --------->ANAC58           <---------AHL20(2)       --------->ANAC46           --------->AHL20(2)     --------->ANAC58      ------------>CBF     <---------ALFIN1    <---------WRKY18(1)     --------->ANAC46   --------->WRKY38(1)  --------->AHL20(2)     --------->ANAC58  <---------WOX13(1)  ----------->GT1                    <-----------GT1   <---------ALFIN1   <------------CBF   ---------->DOF2                   --------->AHL20(2)   --------->ANAC46  <------ZmHOX2a(1)--------->YAB1                  ------------>CBF -->DAG2         ---------->DOF2--------->TOE2(3)               <----------DOF2   <------------CBF -->DOF2  ----------->RAV1(1)   --------->YAB1   --------->AHL20(2)  ---------->ID1<---------WOX13(1)   ttcccacacaccccacaaaaaaaggattgaccaatattaattagaaagaaaataaaaactatccagcttttgtccaattttttcgattgactacatttca  24810900                                                                     <---------AHL20(2)                                                                    <---------AHL20(1)                                                                    --------->AHL20(1)                                                  <------------CBF <---------AHL20(2)                                                <---------AHL20(2)===================================                                                --------->AHL20(2)<-----------------AGL3               ----------->GT1     <---------CCA1(2)             --------->AHL20(2)      ----------->GT1      --------->ARR11(3)  --------->AHL20(2)----------->TBP                  --- <---------ALFIN1    <------------CBF    ---------->ID1    ----------->RAV1(1)       ---------->DOF2<   tccccatcttgaaaaatgtgtaaaattgagacctcgcatatttttcgcatttaattggagaccacatatatatatttggcacttaaaacaagcgcaagtt  24811000                             ----------->GT1                            ----------->GT1                <---------------AGL15                --------------->AGL15               <---------ANAC55(2)               <-----------------AGL3               ----------------->AG               <-----------------AG              ---------->DOF2           <----------DOF2   <-------               ----------------->AGL2        --------->ANAC58     <---------HSFC1(2)         --------               <-----------------AGL1        --------->ANAC58     --------->HSFC1(2)    ----------->GT1 ================================MADS_MADS   <----------ID1   --------->TOE2(3)    ------------>CBF ------->DOF2  <-----------------AGL2      --------->CCA1(2)  <---------MYB59      <---------YAB1---- ---------TOE2(3)   <------------CBF  ---------->DOF2--------->ALFIN1  <----------DOF2  --------->YAB1   taaaggaagaaacgattacttaaattggcaagggaaaaaaaaaagagacgacaaagtgcgactacctaagcttctttctttcttcatcaatggtgaatcc  24811100                                                                                      ----------->GT1                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                   <---------MYB52(1)                                                                                  --------->LBD16                                                                                  ------>NtERF2                                                                                 <---------ETT(1)                                                     ------>MYB83               <---------LBD16                                                     -------->P               --------->ARR14(2)                                                     ------>MYB46(1)          <---------ARR14(2)                                                     --------->MYB52(1)      <---------MYB52(1)                               <---------MYB52(1)   --------->MYB55(1)     <---------------AGL15                             <---------ANAC58      <---------MYB111(1)     <---------ANAC58                             <---------ANAC58      --------->TOE1(2)       <---------ANAC58<---------ANAC46    <---------ZAT2   --------->ANAC58           <-----------GT1           <-----------------AGL2   --------->ANAC58  --------->ANAC58      <---------ARR11(3)             ----------------->AGL1   --------->ANAC58  --------->ANAC46      --------->ARR11(3)             ----------------->AGL2   <- --ARR14(2)      --------->ANAC58      <------ZmHOX2a(1)                  ----------------->AG     <- ->ARR14(2)      --------->ANAC46    <---------TOE2(3)                    <-----------------AGL1   -- -->ZmHOX2a(1)   --------->ANAC58--------->MYB52(2)<---------MYB59 --------->YAB1<---------LBD16   --   tagcccagcaagtttttggacgcaagccaatgcgttacttaggaagaacttaacctaccaggtatgttttcatattgccgtttccggcaagttacttaga  24811200  Previous    Next  AGI:  At5g61690.1    Description:  ATATH15 (ABC2 homolog 15); ATPase, coupled to transmembrane movement of substances. similar to ATATH1 (ABC2 homolog 1), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47730.1); similar to ATATH11 (ABC2 homolog 11), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT5G61730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62524.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62102.1); similar to hypothetical protein OsJ_026123 [Oryza sativa (japonica cultivar-group)] (GB:EAZ42640.1); contains InterPro domain ABC transporter related; (InterPr Range:  from: 24806721    to: 24810713    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g61700.1    Description:  ATATH16 (ABC2 homolog 16); ATPase, coupled to transmembrane movement of substances. Identical to Putative ABC2 homolog 16 (ATH16) [Arabidopsis Thaliana] (GB:Q9FLT8); similar to ATATH2 (ABC2 homolog 2), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47740.1); similar to ATATH6 (ABC2 homolog 6), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47780.1); similar to ATATH14 (ABC2 homolog 14), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT5G61740.1); similar to hypothetical protein OsI_028133 [Oryza sativa (indica cultivar-gro Range:  from: 24811090    to: 24815170    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version