Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                             <-------                          <---------ANAC58                                                   --------    <---------YAB1        --------->YAB1                                                     <------- --->SPL7                 <---------ANAC58                       --------->YAB1        ------>NtERF2 ----ZAT14         <---------CCA1(2)                             <---------ICU4     <---------ANAC58 --->ZAT14     <---------ANAC58                            --------->YAB1           <---------ANAC58 --SPL7    <---------ANAC58                              ------>MYB46(1)--------->ANAC58   <---------SPL7 --ZAT14   <---------ANAC58                              ------>MYB83   --------->ANAC46 ------------ --SPL1(2) <---------ANAC46                         <------ZmHOX2a(1)   --------->ANAC58 ------------ ----->AtSPL3  <---------ANAC46               --------->ANAC46  <---------YAB1 <---------ZAT6-------- ------>SPL14  <---------ANAC58       <----------DOF2  <---------MYB59<---------ALFIN1 --------------   agtgtgatgaatggcttgcttctatctatcgtgaccttctctttgtatacaccaggacctatcttgatgatcacacgcctagtgttccctgcccgtacac  24804800                                                                         <---------AHL20(2)                                                                       <---------AHL20(2)                                                                      --------->AHL20(1)                                                                      <---------AHL20(1)                                                                      <---------ARR11(3)                                                                      --------->ARR11(3)  <-----------GT1                                             <------ZmHOX2a(2) <-----------GT1                                             <---------ARR11(3) -->ZAT6                                                     --------->ARR11(3) --ZAT14                                                     --------->AGP1<---------AHL20(2) ->SPL7                                                      <---------ARR14(2)     ----------->GT1 --ZAT18                                                    --------->GLK1(1)     <---------ANAC46 --->AtSPL3                                     --------->At4g35610   <---------AHL20(2) --->AtSPL8                                     ----------->RAV1(2)   --------->AHL20(2) ->ZAT14    <---------MYB52(1)                  <---------At4g35610  --------->AHL20(2) ---->SPL14<-------GAMYB                      <-----------GT1--------->ARR14(2)<---------YAB1    <---   tatttatcgcttcggttattgtcttgaaatggcctcttccattttgtttcacctgcattcgtagatccaaaatatatttttatgatgtgtaaaacccaaa  24804900                                                                 <---------YAB1       --------->ANAC46                                                            ----------->GT1           --------->ANAC58                                                          <---------ANAC58            --------->ANAC58                             --------->CCA1(1)            <---------ANAC46        --------->YAB1          ---------->DOF2    --------->RVE1(1)            <---------ANAC58       <---------TOE2(3) ------>ZmHOX2a(1)       --------->AHL20(2)               <---------ANAC55(1)    <---------YAB1 ------ARR11(3)   <---------ARR11(3)               --------->AHL20(2)<---------MYB46(3)   atcctacatacaaaatgcgatatcatataaaatatcgcaatatcgaactaaaaaaaaatagcgtgttatatttgttgaaaattaacataagcaaaacgtc  24805000                                                                       <---------At4g35610                                                                      <---------ARR14(2)                                                                 --------->ZAT2                                                                 <---------At4g35610                                                                 --------->At4g35610                                                          <---------WRKY38(1)                                                     <---------At4g35610                                                     --------->At4g35610------>ZmHOX2a(2)                    --------->YAB1         <---------ANAC58      <---------ZAT2                   <---------YAB1          <---------ANAC58     <---------AGP1                 <---------ICU4            <---------ANAC46   ---------->DOF2                --------->ICU4        --------->ALFIN1   --------->WRKY18(1)             <---------YAB1           <---------ANAC58  <-----------HVH21        <---------DAG2       --------->ICU4       <---------ANAC58       <-----------RAV1(2)--------->ARR14(2)           --       ----------->GT1      <---------ANAC58       ---------->CDC5    <---------AGP1           ------  --------->ANAC55(2)  --------->YAB1 <---------ANAC46  --------->At5g28300      <----------DOF2 <---  <---------ANAC55(2) <---------YAB1  <---------ANAC58  <--------ZAP1 <---------ARR11(3)     --------   tattaagtaatgtttataaatattatcatgccttgatgatgcgtggcttagcctcagcggtcaatagagctggatctgatgtgctttttctactagccaa  24805100                                                       <---------At4g35610                                             <---------HSFB2a(2)         <------MYB83                        --------->ANAC46                    <---------DEAR3(1)         <------MYB46(1)                     --------->HSFB2a(2)              ------->PIF5        ---        <---------AtMYB61        ------>NtERF2  <---------ARR14(2)            <-------PIF5      ----- ------->MYB52(1)           <---------ARR14(2)  --------->ARR14(2)     ---------->DOF2    --------->YAB1 --->MYB52(1)               --------->ARR14(2)--------->LBD16     <---------DOF5.7(2)     <---------ICU4 ------MYB52(2)    <---------ALFIN1         <---------LBD16     --------->DOF5.7(2)      --------->MYB46(3) ->MYB46(3)       --------->MYB46(3)<----------DOF2    --------->At4g35610  <---------LBD16     <----   cgaagggacgttggtgttgaaccactgctcgattcggcctttgttctccggaattggtgctgcatcgttaccgaaaaccacgggcgatgtaatcaccacg  24805200                                                                                      <----------DOF2                                                                                 <---------WOX13(1)                              <---------CCA1(2)                                --------->ATHB12     ----------->GT1     <---------ICU4         <---------TOE2(3)             <---------YAB1     <---------MYB46(3)  --------->ATHB51      --------->YAB1 <----------DOF2 --------->ICU4  <------ZmHOX2a(1)     <---------YAB1         --------->AHL20(2)          --------->ICU4 ------>ZAT2          --------->ANAC55(2)      <---------AHL20(2)   ---------->DOF2<-----------GT1 -->PIF5              <---------ANAC55(2)    <---------YAB1   <---------DAG2--------->YAB1          < ---PIF5       <---------------AtSPL8  --------->ZAT14  <-----------GT1  ---------->DOF2   <---------At4g35610   agcaggattgttactatgagggacacataattgtatcccattgtactattaatatttgttactacttttctaaagtaaagatgattaactttctgcttct  24805300                                                             <---------ICU4                                                        --------->DOF5.7(2)                                                        <---------MYB52(1)                                                       <---------RAP2.6(3)                 --------->ARR11(3)                    <-------GAMYB                 <---------ARR11(3)                    --------->At5g28300            <-----------TBP          <----------ID1   ----------->GT1                     <----------DOF2        ----------->GT1           --------->DAG2  <---------MYB52(1)              --------->ARR14(2) ----------DOF2 <---------CCA1(2)---------->DOF2--------->ANAC46      <------------CBF    <---------DAG2   tcctttcttatggtatatatatctataccatctctaaaagcgaagaatacccgttgccgttaatttttgctaaattggtttctggttcttcactttttat  24805400                                                                                              -------                                --------->ANAC55(2)                                           =======                                <---------ANAC55(2)                                           <------                               --------------->AtSPL8                                         <------                             <---------AHL20(2)                                            <---------                <-----------GT1<---------------AtSPL8                         <---------HSFC1(1)         --------->TOE2(3)<---------AHL20(1)                                  --------->HSFC1(1)    <-----------GT1       --------->AHL20(1)                                  --------->HSFB2a(2) <--  --------->AHL20(2)     <---------AHL20(2)         --------->WOX13(1)        <---------HSFB2a(2) <--  <---------AHL20(2)   <-----------TBP            ------------>CBF   <---------AHL20(2)    <---------AHL20(2)   tcattttaatcccttaataaactctatatatattatgtactgttttaagtgtttcaatctaactaatttagtttatttgtctagaaaactaatttacttt  24805500              <---------MYB52(1)            --------->O2            <---------O2            <---------TGA1a            --------->TGA1a         --------->DEAR3(1)        --------->MYB46(3) ----------->GT1                     <---------ICU4                 <---------HSFC1(2) -------->AGL15                      --------->ATHB12               --------->HSFC1(2) =====================bZIP_DOF      --------->ICU4                  <---------HSFB2a(1) ---------AGL15                 --------->MYB46(3)                  --------->HSFB2a(1) ----DOF2--------->TOE2(2) --------->HSFB2a(2)                  --------->ANAC58 --GT1  --------->DEAR3(2) <---------HSFB2a(2)                  --------->ANAC46 -------TOE1(3)        <---------YAB1-------->HAHB4             --------->ANAC58               ------ -------TOE2(3) --------->MYB52(2)  <---------ATHB12   <-----------GT1                         ------   aaggtgtaaaaccgacgttagttttatttttggaacaaatgattagctaatgctatattactaaacaagaaacttctcaatactaaacatctaaaccgaa  24805600                                                                                             --------                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                  --------->ARR11(3)          --------->RVE1(1)                                                       --------->ARR14(2)          <---------GLK1(1)                                                       <---------ARR14(2)          --------->GLK1(1)                                                       <---------ARR11(3)         <---------ARR11(3)                                                      --------->GLK1(1)         --------->ARR11(3)                                                      <---------RVE1(1)  <---------ANAC58                                                              <---------ARR11(3)  <---------ANAC46                                                              --------->ARR11(3)  <---------ANAC58                                            <---------At4g35610<---------GLK1(1) >MYB83<---------TOE2(3) ----------->GT1          <---------AHL20(2)           <------ZmHOX2a(1)<---- >MYB46(1)--------->CCA1(2)      --------->MYB59 --------->AHL20(2)   <---------ZAT6     <---------CCA1(2)   catggcgttaagatatcccaaatagtattgtgaattaggcataaatcgctataaaatcaacttcagcgactattgttagtaggatatcttcatatccttg  24805700  Previous    Next  AGI:  At5g61680.1    Description:  pectinesterase family protein. similar to ATPPME1, pectinesterase [Arabidopsis thaliana] (TAIR:AT1G69940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78808.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62285.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 24803642    to: 24805241    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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