Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------GLK1(2)                 <---------AHL20(2)                       <---------ICU4                 --------->AHL20(1)                    <---------ICU4           --------->YAB1                              --------->YAB1          --------->AHL20(2)                          --------->ICU4          <---------AHL20(2)                          <---------YAB1      --------->AHL20(2)                          <---------ARR11(3)      <---------AHL20(2)  --------->ANAC58        --------->ARR11(3)  <------MYB46(1)--------->AHL20(2)              --------->YAB1  ----------->GT1<---------AHL20(1)<---------ANAC58 --------->YAB1  <------MYB83--------->YAB1       <---------ANAC58<---------YAB1 ----------->GT1  <---------DEAR3(2)      --------->ANAC58      --------->ICU4  <---------GLK1(2)   aagtcggtttaattaataataaattctcaggccaatggcttaaccatgcgatgatcataatcactagattgttaattcaaaactaatcttgagtattcaa  24795100                                                     --------->YAB1                                                     <--------ATHB1                                                     <---------AHL20(1)                                                     --------->AHL20(2)                                        -------->P   <---------AHL20(2)                   <---------AHL20(1)                                   <---------ZAT18   <---------ICU4                       <---------ARR11(3)                            --------->ATHB12        --------->ICU4                        --------->AHL20(2)                         <---------ANAC46           <---------YAB1                        <---------AHL20(2)                         <---------ANAC58        <---------YAB1              --------->DOF5.7(2)                         <---------ANAC58 <---------ALFIN1                  --------->TOE2(3)       -                         <---------ANAC55(2)   --------->YAB1             <---------TOE1(3)        --                         --------->ANAC55(2)  <---------YAB1              <---------TOE2(3)   <------                   --------->AHL20(2) --------->MYB46(3)                 <-----------GT1  --------->AHL20(1) ------->TEIL   --------->YAB1     --------->ZAT18--------->YAB1        <-----------GT1   --------->ARR11(3)   atgaaactacaaaatcaaacataaaatgcgtgatttgtgaactaccacatgataataattttagttgaagagttttaacgtttactagggaatatatttc  24795200                        <-------TEIL                     --------->CCA1(2)                     --------->GLK1(1)           ----------->GT1                    --------->ARR11(3)           <---------ANAC58                         <---------YAB1                    --------->ARR14(2)           <---------ANAC55(2)                    --------->YAB1           <---------AHL20(2)                    <---------ANAC46                    --------->YAB1 -------->MYB46(3)  <---------ARR14(2)  <---------YAB1       ------->TEIL      --------->ARR11(3)   - ------->AtLEC2  <---------TOE2(3)    <----------DOF2      <-------TEIL        <---------ARR11(3)  -- -----GT1<---------AHL20(2) --------->AHL20(2)   <---------ANAC58              --------->GLK1(2)   <-   catccaactatattttttcaaggatatacataaaataagacttttattgtttcgtaaaaaatgcatttagttttaaacaaaaatctaaaatgatacttgt  24795300                                                              <---------AHL20(2)                                                        --------->YAB1                                                        --------->TOE2(3)                                                       <<<<<<<<<ARR1                                                       <<<<<<<<<ARR2                                                  <-----------GT1                                                  --------->YAB1                              -------         ----------->GT1                       --------->KAN4(2)                              ------- -------->ATHB12                              --------->KAN4(1)                        <---------ICU4 ------->ICU4      --------->YAB1             <---------KAN4(1)             ----------->TBP   ------- --------YAB1     --------->AHL20(2)         <---------KAN4(2)--------->AHL20(2) --------->ZAT6   ---   aatgaatggagtagtagaaaataaaaattcaatgcatatagtaatagaatattcacaatcttatttaaaattccttctatataacaccaaaatgacaggc  24795400                                                                               <---------MYB52(1)        <-------TEIL                                                 <----------DOF2     ----------->GT1 --------->AtMYB61                            <-----------GT1    <---------------AtSPL8                                       <---------CCA1(2) -->AtLEC2    --------->ANAC58                           <---------GLK1(1)    --------->LBD16 -->ANAC58    --------->ANAC58   ----------->GT1         --------->ZAT14      <-----------TGA1 -->ANAC58  ---------->DOF2 <---------ANAC55(2)          <---------ZAT14*TSS  <-----------HVH21 ------->DOF2--------->DAG2 --------->ANAC55(2)          --------->GLK1(1)   --------->ANAC55(2)   aaaagacaggtacaaaaagcaaaccaaaacatgtaatgtaataaactcatcaaaaacagagctctgtttatcttttcttccgtcattcgaatggctgatc  24795500                                                                              --------->ARR14(2)                          ------>ZmHOX2a(2)                                   <---------ARR14(2)                         <------ZmHOX2a(2)                                    ------->TEIL                        <---------ARR14(3)                                    <---------ARR11(1)                  ------->TEIL--------->HSFB2a(2)                            <---------CCA1(2)              <---------KAN4(2)     --------->ATHB12                       <---------ANAC46         --------->LBD16--------->ARR14(3)                      <-----------GT1<---------CCA1(2)      --------->CCA1(2) <---------ARR11(3)                   <----------DOF2 <---------ARR14(1)      <------ZmHOX2a(2) --------->AGP1             --------->AtLEC2        <---------ANAC58     <----     --------->ARR14(2) --------->ARR14(2)      <------ZmHOX2a(2)          <---------ANAC58   -------     <---------ARR14(2) --------->ARR11(3)     <---------ARR11(3)  ------->GAMYB              -------     --------->AGP1   ----------->ARR10        --------->ARR11(3)--------->RAP2.6(3)          -------     --------->ARR11(3) <---------ARR14(2)   ----------->ARR10  --------->MYB52(1)            <------   agattgagatccagagaatgaaccaagatcttcaagaaccattggctgagatcatgccaagtgttttaacggcaatgtcgtatctcttgcaaagagtatc  24795600                                                                                                   <-                                                                                                   --       ------->GAMYB                                                                          <------      --------->MYB46(3)                                                                     ------>ZmHOX2a(2)     ------>MYB83                                         --------->HSFB2a(1)               <------ZmHOX2a(2)     ------>MYB46(1)                                      <---------HSFB2a(1)              --------->ARR11(3)    --------->MYB52(1)                                  ------>MYB83                       --------->ARR14(2)   --------->TOE1(2)                                    ------>MYB46(1)                    ------->TEIL   --------->AtMYB61                                  <---------MYB59                      <---------ARR14(2) -----ANAC46                                       <-----------GT1                         <---------ARR11(3) -->GLK1(2)                                   <---------ZAT14------>MYB83                 <---------ARR14(1) -->MYB52(1)      ----------------->AGL2      --------->ZAT14------>MYB46(1)       <---------HSFB2a(2) -->ARR14(2) --------->TOE1(3)       --------->ANAC58 --------->AtMYB61            --------->HSFB2a(2) ---ARR14(2)----------->RAV1(2)      --------->ANAC58--------->MYB46(3) --------->YAB1--------->MYB52(1)   ggagaccaacgacaacctgagccagaaacagaagccctcaagcttcactggagtaaccaaaccttccatttccatcagaagctatctcgaacggatcttt  24795700                                                        <---------ANAC46                                                        <---------ANAC58                                                    <---------DEAR3(2)                                                    <---------MYB46(3)                                                   ------>ZmHOX2a(2)                                                 --------->ARR14(2)             <---------At4g35610          <---------AHL20(2)  <---------ANAC55(2)                    --------->AHL20(1)                       <---------ATHB12  --------->ANAC58                       <---------AHL20(1)                   <---------ANAC58  --------->ANAC58                      <---------AHL20(2)                    <---------ANAC58  --------->ANAC46                     <-----------------AGL3    --------->At4g35610 --------ARR14(2)                     --------->AHL20(2)<---------ANAC58    <-----------GT1 ------->ARR14(2)    <---------ZAT6 <---------CCA1(2)  <-------TEIL     --------->ICU4 ----DOF2<---------REM1(1)    <-----------HVH21  <---------ARR14(2)--------->RAP2.6(2)   <----------DOF2   gaatacgcgaattgtagctactcgtgttacatcgtcgcatatatatatttggatcggttcgtgaagaagcagccatttttgcctatcaattcttttaatg  24795800                                                             --------->AHL20(2)                      <---------ANAC58                       <---------AHL20(2)                      <---------ANAC46           <---------ANAC46                           <--------                      <---------ANAC58           <---------ANAC58                          --------->AHL20(2)             --------->YAB1                      <---------ANAC58                <---------DAG2          --------->YAB1               <-------TEIL          <---------ATHB51    <----------DOF2          <---------ICU4        <---------At4g35610      --------->AHL20(2)   <-----------GT1         <---------YAB1         --------->At4g35610    ----------->GT1       --------->AHL20(2)   tccataggcttataatcacaagtgtcttggtctctgctaaattcatggatgacttgtaagtaaataattctgaggctaattaactttttgaaatttacta  24795900                             <----------DOF2                           <---------YAB1                          --------->ARR11(3)                          <---------AHL20(1)                          <---------ARR11(3)                         --------->RVE1(1)                   ----------->GT1                            ------->TEIL          <---------KAN4(2)               <---------AHL20(2)                          <---------ATHB12       <------ZmHOX2a(1)     <---------TOE2(3)   --------->CCA1(1)     <------ZmHOX2a(1)         --------->DAG2 ---GT1        --------->AHL20(2)   <-----------GT1  --------->REM1(1)  ---------->DOF2 --------->At4g35610   atgagttaacattttgtttaattgttaatatctttgtgtaacaattttaggagttacaacaatgaatattatgcaaaagttggaggaataagcagagaag  24796000  Previous    Next  AGI:  At5g61650.1    Description:  CYCP4;2 (CYCLIN P4;2); cyclin-dependent protein kinase. Identical to Cyclin-U4-3 (CYCU4-3) [Arabidopsis Thaliana] (GB:Q9FKF6); similar to CYCP4,3 (cyclin p4,3), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT5G07450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70506.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related 2 (InterPro:IPR013922); contains InterPro domain Cyclin-like (InterPro:IPR011028); contains InterPro domain Negative regulatory factor PREG (InterPro:IPR012389) Range:  from: 24795472    to: 24796324    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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