Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------YAB1           <---------YAB1         --------->CCA1(2)      ----------->ARR10    <---------ZAT14                                                                <---------ANAC58    <---------ZAT18                                                     --------->AHL20(2)    --------->ZAT14                                                     <---------AHL20(2)<---------HSFB2a(2) ---------DEAR3(1)                --------->GLK1(1)                    <-----------------AGL3      <- ->ZAT2 --------->ARR14(2)        <---------GLK1(1)           <----------DOF2      <---------ANAC58-- --ZAT2 <---------ARR14(2)    --------->TOE1(3)           <----------DOF2 <---------AHL20(2)    <----   ggtctgtgcagatatgattcttgagttgtatacctgaaatctccaagaggctctctctctctttctttctctatatatatatggttcttgttcttgaagg  24777900                                                                            <---------At4g35610                                                                            --------->At4g35610                                                                           --------->ANAC46                                                                     <----------DOF2                                                             --------->GLK1(2)  <---------ALFIN1                                                            <---------GLK1(2)  --------->ZAT14                                                       ------->GAMYB ----------------------->TaNAC69(2)              --------->ANAC58                        --------->MYB46(3) <-----------GT1     <-------  <----------DOF2                                   <-----------GT1  <---------DAG2<----------DOF2 --------ARR11(3)       --------->YAB1        <---------MYB46(3)  <---------ALFIN1 <---------DAG2 ------->ARR11(3)---------->DOF2          <---------ANAC46  --------->ARR14(2) <---------ZAT18 --ZmHOX2a(1) --------->ANAC58         <---------AtMYB61    <---------ARR14(2) <---------ZAT14   agaactttgcagttttaagcaaagtatcatgaactaatcttgtggtgtttgttataaccacagattctacactttttacgctgcacttttctccatcaat  24778000                                                                                             --------                                                                             --------->AHL20(1)  ----                                  <------MYB46(1)                            <---------AHL20(1)  ----                            --------->LBD16                                  --------->ARR11(3)<-----                            <---------LBD16                                  <---------ARR11(3)<-----                           <---------HSFB2a(2)                          --------->LBD16     ------->GAMYB                         ----------->RAV1(2)                           --------->LBD16      ---------                        ------>ZmHOX2a(1)                             <---------LBD16      <---------MYB55(2)                        ==========================HOX2a_HOX2a         --------->LBD16      <---------MYB111(1)                     <---------YAB1          <---------LBD16         <---------LBD16       <---------MYB111(2)                    <-----------GT1        ------>ZmHOX2a(2)        <---------LBD16        --------->MYB46(3)               <---------ARR11(3) <------MYB83                  <---------GLK1(1)          <---------MYB52(2)               --------->AHL20(1)<---------AtMYB61             --------->ARR14(2)       --------->MYB46(3) --ICU4   <---------ANAC46 --------->HSFB2a(2) --------->LBD16 <---------ARR14(2)    --------->MYB46(3)   acattcagtgttttgtatatattatccttctggggatggtattgatccccagagcaaaacttgtggattttcccgggaaaatattcaacaacaactaccg  24778100                                     --------->ANAC58                                     --------->ANAC58                                --------->ANAC58                                --------->ANAC58     <---------YAB1 ->MYB52(1)         --------->MYB52(1)    <---------ZAT6               ----------->GT1 -->MYB83       --------------->AtSPL8    ----------->GT1      --------->ANAC58 -->MYB46(1)    <---------------AtSPL8  <---------ANAC46 <-----------GT1 ----MYB59      --------->DAG2  --------->ANAC46  --------->ICU4       <---------ZAT6<----------DOF2 ----MYB46(2)  ---------->DOF2<-----------GT1  --------->ICU4  --------->ANAC58   ------>ZmHOX2a(1) >MYB55(1)----------->GT1   <---------AHL20(2) <---------YAB1 ------->TEIL  <-----------GT1     -----   aactaaaacacactgaaaaaagtaccagatttaaacggcacggagtgttataattcttattacgaacgtcatggtgttatactccttctttttcaaatcg  24778200                 <---------TOE2(3)        ----------->GT1                               =============              <---------MYB52(1)         ------>ZmHOX2a(2)    --------->ANAC58          ------>ZmHOX2a(2)         <-----------GT1           <------------CBF           --------->ANAC58        --------->ARR11(3)     <----------DOF2            --------->LBD16     --------->LBD16                   <---------ARR11(3) --------->KAN4(2)    --------->ATHB12--------->ATHB12<------------CBF           <---------AtMYB61 ------>GT1  <-------GAMYB    <---------LBD16     <---------LBD16          ---------->ID1           -   gtttattcttttttccgttaagtttgatttgaaccggaattgatcggtttaatccggattgaacaagcctagtcttcttcgttttggtgatctctctctc  24778300                                                              --------->ANAC46                                                         --------------->AtSPL8                                                        --------->GLK1(1)                  --------->ARR14(2)                                                       <---------ARR14(2)                  <---------ARR14(2)                                                       --------->ARR14(2)               <---------ANAC58                                                   <-------TEIL                         <---------ANAC58                                                 <---------ARR14(2)           --------->At4g35610                                --------->ARR11(3)--------->ARR14(1)          <---------HSFC1(2)                                --------->GLK1(2)<---------GLK1(2)            --------->HSFB2a(1)     <------------CBF           <---------ARR11(3)--------->GLK1(2)           --------->HSFC1(2)    <     *TSS                      --------->RVE1(1) --------->ARR11(1)           <---------HSFB2a(1)   < ======HOX2a_HOX2a      --------->GLK1(2)        --------->ARR14(2)           <---------ZAT2 <------- ----->ZmHOX2a(1)      <---------GLK1(2)    ----------->RAV1(1)               <---------At4g35610  --   tcctatgaattgaattccacagagagattctaaaaatctttcaatcccacagattcggatttgtactccatactcatggaagcttcgatttcgtttctgg  24778400                                                          <---------GLK1(1)                         - ---------WRKY12          <-----------GT1                 --------->GLK1(1)                      ---- ---------WRKY38(1)<---------ANAC58               --------->TOE1(1)                              <--- --LBD16        <-----------GT1                  ------>ZmHOX2a(1)       <----------DOF2         ---- ------->WRKY18(1) <---------ANAC58          ------>ZmHOX2a(1)        ------>ZmHOX2a(1)          ----   ggtcaacaaaacccaatatttccttgtttaacccttcttcaaacgtccttcctcgtagagatttccctcttcctgctttgaaattgaagaaagtttcagt  24778500                                                                                                   <-                                                                                                   <-       <---------ARR11(1)                <---------ZAT18                                           --       --------->ARR14(2)                --------->ZAT18                                           ==       --------->GLK1(2)            <---------ZAT14                                                --       ------->TEIL               <---------At4g35610                                              --       <---------ARR14(2)         --------->At4g35610                                           -----      <---------ARR14(1)     --------->At4g35610                                            ---------      <---------CCA1(2)      <---------At4g35610                                            <-------- ----->NtERF2               <-----------HVH21----------->HVH21                     --------->HSFB2a(2) ----->ZAT2        <---------ARR14(2)    --------->ZAT14                           ------>ZmHOX2a(1) ------At4g35610   --------->ARR14(2)    <---------ZAT14                           <---------HSFC1(1) ----->ZAT14  ----------->RAV1(1) --------->ZAT2                <------ZmHOX2a(1)  <---------HSFB2a(2) ----->At4g35610 --------->ANAC46 <---------ZAT2<---------WOX13(1)                 --------->HSFC1(1)   gctgcctcgaatcttgcaccagaaacgactcatcagagctcagtgctctgatggattcaaaccagaggaagacgatgggtttgtcctagaagacgttcct  24778600        <<<<<<<<<CBP60g        <<<<<<<<<SARD1       ------>MYB46(1)       ------>MYB83     <---------MYB59  <---------WRKY18(1)  >>>>>>>>>>WRKY26  >>>>>>>>>>WRKY38  >>>>>>>>>>WRKY43 --------->WRKY38(1)                                              <----------DOF2 --------O2                       <---------GLK1(2)             <---------YAB1 --------TGA1a               --------->ARR14(2)                <---------AHL20(1) ------->O2                <---------MYB52(1)                  --------->ARR11(3) ==============================bZIP_DOF                        <---------ARR11(3) ------->TGA1a          <---------LBD16                       --------->RVE1(1) ------->ANAC55(2)     --------->MYB52(1)                     --------->CCA1(1) ->ZmHOX2a(1)          <---------At5g28300              ----------->GT1              <-----------GT1 >ARR14(2)            <-----------GT1             <-----------HVH21           <---------YAB1 -ARR14(2)          <----------DOF2<-----------ARR10  --------->ANAC55(2)   --------->CCA1(2) -------   cacttgaccaaatttctccctgatttaccggtattcgattcttcgctgtttctgtcatgtgttaatatctttgtcaagttatgagtttttccatctaaaa  24778700                                                                                                  >>>                <-------GAMYB                                                                   <----               <------MYB46(1)                                                                  <----               <---------ANAC46                                   --------->ARR14(2)            -----               <------MYB83                                       <---------ARR14(2)            -----              <---------MYB46(3)                                 <---------CCA1(2)           --------            <---------MYB52(1)                        <---------TGA2(1)                    --------->ANAC58           <-------GAMYB  <---------ANAC58            --------->bZIP60(1)             --------->ANAC58     <----------DOF2      <---------ANAC58         ----------->HVH21    <---------ARR14(2) --------->ANAC58     <---------DAG2     <-----------GT1  --------->ARR11(3)    --------->YAB1         --------->ANAC58  <-----------GT1<--------P            <---------YAB1 <---------bZIP60(1)           ---------->DOF2  <---------AHL20(2)<---------TOE2(3) <---------TOE2(3)      <-----------HVH21  ---------->DOF2<----- --->DOF2 <-----------RAV1(1)      <---------WOX13(1) --------->TGA2(1) --------->ARR14(2) --------->AtLEC2   gtattaacttttctgttgggttgatgttacttccctaattgatgattttgtttctgacatcacagtcatatccaaatccattgaaagaaagccaagcata  24778800  Previous    Next  AGI:  At5g61570.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G07620.1); similar to protein kinase [Arabidopsis arenosa] (GB:AAR15452.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 24775573    to: 24777878    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g61580.1    Description:  phosphofructokinase family protein. similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G32840.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT5G56630.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G26270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62372.1); similar to hypothetical protein OsJ_000691 [Oryza sativa (japonica cultivar-group)] (GB:EAZ10866.1); contains InterPro domain Phosphofructokinase-core; (InterPro:IPR015913); contains InterPro domain Phosphofru Range:  from: 24778305    to: 24781238    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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