Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ATERF1(1)               <------MYB83               --------->At4g35610               <---------ATERF1(1)               <------MYB46(1)               <---------At4g35610         <---------ANAC46         <---------LBD16  ---------->DOF2 ------>At4g35610  <------NtERF2 -------ZAT2  <---------AtMYB61 -------At4g35610--------->ALFIN1                                                     --------->ARR14(2) ------>ZAT2  --------->ALFIN1                             --------->MYB52(2)        <---------GLK1(1) ->CCA1(2)    <---------DEAR3(1)                  --------->YAB1                     --------->GLK1(1) >ARR11(3)  <---------MYB52(1)                 <----------DOF2                  ----------->GT1------ -ARR11(3)<---------LBD16                    --------->HSFC1(2)               ---------->DOF2  ------ >AGP1----------->HVH21<---------REM1(1)     <---------HSFC1(2)     --------------->AGL15 ------>ZmHOX2a(1)   agctgaaagtgaccgggaggtgccgatgtagagaggtctaaaatagaagctttcatatcgatagtttcttccacttatcgaaaagagaaatcctctcctg  24769700                      >>>>>>>>>>WRKY6                      >>>>>>>>>>WRKY11                     --------->WRKY38(1)                     --------->WRKY12                     --------->ZAT18                  <---------ZAT6                    --------->ANAC46          <---------ARR11(3)                --------->ANAC55(2)   <---------AHL20(2)          --------->ARR11(3)              <-----------GT1        <---------AHL20(1)         <---------GLK1(2)              <----------DOF2          <---------AHL20(2)     ---------->DOF2 --------->WRKY45   <---------DAG2           --------->AHL20(2) >ZmHOX2a(1) <----------DOF2         <-----------GT1--------->ANAC55(2) ----->GT1--------->GLK1(2)   <----------DOF2     <-----------GT1--------->AHL20(1)              ----   taaatcgaaaagaatctttagagttgactaaacttttgtttactttacctattcacataacttgaaatttattagtcaaaagtttagaagaaaaaacaaa  24769800                            --------->At4g35610                            <---------At4g35610                  --------->ANAC58                                                           --------                  --------->ANAC46  --------->ANAC58                                     --------->YAB1       ---------->DOF2--------->AHL20(2)                                            <-------TEIL ----->AHL20(2)   --------->ANAC58  --------->ANAC58                          --------->TOE2(3)   aaaattcgcaaaagaaaaacacgataatatagctgaacaagaaaatcaaaaacaaaattgtattttggcagaaaatgaaacctatattcattcataaggg  24769900                                                   <------MYB83---------->DOF2            --------->TGA2(2)                                                   <------MYB46(1)                       <-----------TGA1                                                  --------->MYB111(2)    <---------MYB46(3)                                                  --------->MYB111(1)<-----------RAV1(2)--------->bZIP60(2)                    ---------->DOF2              <--------P======================RAV    --------->ANAC46     --------->MYB46(3)                ---------->DOF2     ----------->RAV1(1)    <----------DOF2 ->DAG2       --------->DAG2      --------->AHL20(2)      <---------ETT(1) ----------------------->TaNAC69(2)   aagggaaacagcccaaaaattgaaaagtcaacaaaattgaataaagaacaagttggtagtccgacaaaagcccagttgttctgactttcaacgtcatcaa  24770000                ---------->DOF2             --------->LBD16            <---------HSFB2a(2)            --------->HSFB2a(2)           <---------LBD16          -------->P          --------->MYB52(1)        <---------MYB52(2)                                                                    *TSS        --------->MYB46(3)                         <----------DOF2                          <--------HAHB4       --------->HSFC1(2)           --------->ANAC58                                        ---------       <---------HSFC1(2)           --------->ANAC46            <---------YAB1              <--------    <------ZmHOX2a(1)               --------->ANAC58     <-----------GT1                   <---------YAB1  <---------TOE2(3)       --------->ANAC55(2) <---------HSFB2a(2)                         <---------- --------->MYB52(1)       <---------ANAC55(2) --------->HSFB2a(2)                   <----------DOF2   aactaaggaaactaccggaaaagacatcacatattcacacgaactcttctagacttttttgacattttcatttctctcatcgttttcttttttatcatta  24770100                                                                                 <------ZmHOX2a(1)                                                                                --------->At4g35610                                                                              --------->YAB1                                                                              <---------ICU4                                                                          <---------AHL20(2)                                                                         <---------AHL20(1)                                                                         --------->AHL20(1)                                                                         <---------AHL20(2)            ----------->GT1                                              --------->AHL20(2)    ------ <----------DOF2                                         --------->LBD16--------->YAB1         <----- >YAB1  --------->ATHB12 ---------->DOF2             <-----------GT1   <---------YAB1          <----- -ICU4------->TEIL<-----------GT1  <---------At4g35610 <---------LBD16--------->AHL20(2)   <--------- -GT1<---------CCA1(2)  --------->AHL20(2)   --------->LBD16<---------CCA1(2) <-----------RAV1(2)   cttctttgaatctttggttataaccattaaagaattcaactggtatgcgcataaatttccgcataactccattaatataatcaggagaccaattcactgg  24770200                                                                                             --------                                                                                             --------                                                                                       <---------ANAC58                                                                     <---------ALFIN1  <---------ANAC58 --->ZAT14                                                        --------->PCF2    --------->DAG2 ----ZAT18                                                     <---------SPL7 --------->HSFB2a(2) ----ZAT14         <<<<<<<<<TBF1                           --------->YAB1     <---------HSFB2a(2) --GT1       ---------->ID1                     --------->GLK1(2)--------->SPL7    ---------->DOF2   actcaaatttgattcgtcttcttcttctctctctctctccatttgtcaagaagctgttgaatcatcgtcccccacgagttttggaaaaagcttgcaagtc  24770300                                                                         <----------DOF2                                                                     <---------CCA1(2)                                                                  <----------DOF2                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                                <---------RVE1(1)                                      --------->YAB1           <---------ARR14(3)                                     <---------YAB1            --------->ARR14(3)                                 <---------WOX13(1)            --------->ARR14(2)                   -                               --------->ATHB12                <---------ARR14(2)                 <--                              <---------YAB1                   --------->AGP1                     ---       --------------->AtSPL8 --------->ICU4                   <---------ARR11(3)                 --- ->ANAC58                   --------->YAB1                     --------->ARR11(3)                ---- ->ANAC58                   <---------At4g35610                <---------AGP1    <---------ARR14(2)<-   aaatatcaataggtactctatcttcaactctgatgattgatcatagccgttcaattggctaacaagatcttttatcttttgagtattttgttatctaaat  24770400      <-----------GT1 <---------AHL20(2)                                                                 <-----------GT1 -------->YAB1                                                                --------->TOE2(3) -------AHL20(2)                                                          <---------AHL20(2) ------>AHL20(2)                                                          --------->AHL20(2) ------>AHL20(1)                                                      <---------AHL20(2) ----->YAB1   <---------TOE2(3)                                       --------->AHL20(2) --------YAB1 <---------TOE1(3)                                      --------->AHL20(2)          ----   tataatattatccattaaggtttcaacttgttttgttttgttttgcccagaaaatgtctctgtaacttacatttaattaaacttaaaaaccagaccaatt  24770500                                          --------->ANAC58                                          --------->ANAC58                                    ---------->DOF2            ---------->DOF2                                  <----------DOF2        <------ZmHOX2a(1)               --------->YAB1                              ---------->ID1           <---------TOE2(3)  --------->TOE2(3)   ------- ----->YAB1              <---------MYB52(1)            <---------TOE1(3)------->TEIL   <---------ARR11(3)   catgactctctctctcttcttctctctgttttgtctctttaagcacgactagagattaaggaaacaaaagcttgaacctttgtagtcaaaatcatcaggt  24770600  Previous    Next  AGI:  At5g61560.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G25160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60843.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78862.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains Int Range:  from: 24770094    to: 24773944    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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