Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->ATHB12                           --------->YAB1                --------->YAB1                -------->ATHB1                -------->HAHB4                <---------ICU4                <---------AHL20(2)                --------->ATHB51                <--------HAHB4               --------->ICU4               <---------YAB1                                                  ======================               <---------ATHB51                                                ---------->DOF2            --------->AHL20(2)         --------->AHL20(1)                  <---------YAB1            <---------AHL20(2)         <---------AHL20(1)                <--------HAHB4           --------->AHL20(2)  ----------->GT1               <----------DOF2--------->YAB1 --------->ARR11(3)       <---------YAB1        ---------->DOF2         <---------YAB1 <---------ARR11(3) ---------->DOF2    --------->AHL20(2) <-----------GT1--------->YAB1 ---------CCA1(2) <---------YAB1<------ZmHOX2a(1) ----------->GT1     --------------->AGL15      ----   ctatatctagctatttaattattaaagaatgataggaaaaatataatatacaaagttatataacttttgtttctattattataaagtttagtaagaaaat  24764900               ----------->HVH21             <---------ANAC58             --------->TGA1a             <---------ANAC58             <---------TGA1a             ----------->GT1             <---------ANAC55(2)          <---------At4g35610             --------->ANAC55(2)          --------->At4g35610             <---------O2                 ------>NtERF2             <---------ICU4             --------->O2             --------->AtLEC2             --------->ICU4                ----   ====================bZIP_DOF  --------->ANAC58       <---------TOE1(2)                  <---------ANAC55(2)   ---------->DOF2          <------ZmHOX2a(1)          ------>ZmHOX2a(1)             ------>ZmHOX2a(1) ======================bZIP_DOF  --------->ANAC58     --------->TOE2(2)             --------->TOE2(3) ------->GT1<-----------------------TaNAC69(2)        --------->TOE2(3)        <-------TEIL--------->ANAC55(2)   tgtataaaagagaagacgtgacaaaaacgaggagcaagtcatgcagccaactaaatcctaagtttagacataatttcaagcttcatcctaaatatgtaat  24765000                                                                                                   <-                                                                                                   --                                                                                                   --         --------->At5g28300             --------->ATHB12                                         ---       --------->ZAT6                  <----------DOF2              <---------MYB52(1)       --------     --------->MYB52(1)            --------->ANAC58 --------->AHL20(2)                    ----------- ----->YAB1     ---------->DOF2    --------->ANAC58 <---------AHL20(2)    ---------->DOF2-------->P<-   catatgctaacagtgaatcaaagcgaaaacaattctcaagcctttattgaatatttatttgtttgacttcgttttttaaagcgaaaactgcaacctgagg  24765100              ------>ZmHOX2a(2)             <------ZmHOX2a(2)            <---------ARR14(2)            --------->ARR14(2)            --------->ARR11(3)            <---------ARR11(3)       <---------ANAC46      ------>MYB83      ------>MYB46(1)    --------->TOE1(2)    --------->TOE2(2) --------GLK1(1)                                                                 <---------AHL20(2) ------->CCA1(2)                                                                --------->AHL20(2) ------->GLK1(1)         --------->AHL20(2)                                <---------AHL20(2) ------->TaMYB80------>ZmHOX2a(1)            --------->ATHB51              --------->AHL20(2)-------- ->MYB52(1)--------->GLK1(1)                 -------->ATHB1          ----------->GT1       ---------- >RAV1(2) ----------->ARR10                 <---------YAB1          --------->DAG2    ---------->DOF2 ---------TaMYB80---------->DOF2  ---------->DOF2                  ---------->DOF2  <---------YAB1---   gatatacctacgtagatcctaaagaaataaaacagagaaagtctgtattattgtttcaatgtatgaagaaaaagtattaaaattttatcaaagaaaagaa  24765200                                                        ------->MYC2                                                        <-------MYC2                                                <------NtERF2                                               --------->RAP2.6(2)                                               <---------ATERF1(1)                                               <---------RAP2.3(1)                                               ------>NtERF2   <---------ANAC58                                              <---------ANAC46 <---------ANAC46                  <---------ZAT2              <---------RAP2.6(2)                             -------                  <---------At4g35610         <---------ATERF1(2)                             -------                  --------->At4g35610         --------->ATERF1(2)                             <------                  --------->ZAT2              <---------DEAR3(1)                              <------                --------->ZAT18              --------->RAP2.6(3)                              -------   --------->AHL20(1)                      --------->ALFIN1    <---------ANAC58              <-------   <---------AHL20(2)                    <---------MYB46(3)<---------ANAC58                  <-------   --------->AHL20(2)                   --------->ALFIN1<-------MYC3                    --------->LBD16 --->GT1--------->ATHB12             <---------TOE2(3)  ------->MYC3                   --------->ANAC46 >DOF2 --------->ICU4        ------->TEIL--------->ALFIN1  <---------ANAC58   ------>ZmHOX2a(1) ------>AHL20(2)<---------ZAT14 <---------AHL20(2)----------->RAV1(1)   ------>ZmHOX2a(1)------------   aaaaataaaatgatttagtgagctgactatgtatataatgaggttgtggcggcaacaacgtgcttgcttgtgtcctaatccttctctctccgtcaataat  24765300                                      ------>MYB46(1)                                      ------>MYB83                                 ------>MYB83                               <---------MYB59      --------->ANAC58         --------->AtMYB61 <---------At4g35610        ------>MYB83 --------->At4g35610        *TSS ------>MYB46(1) -->YAB1                    ------>MYB46(1) -->AHL20(2)              <---------MYB46(2) --ATHB1                  --------->MYB46(3)                             --------->AGP1 ---ICU4                  --------->AtMYB61                            ------->GAMYB -->ATHB51           --------->ARR11(3)                            --------->REM1(1)  --------->At4g35610 --ATHB51            <---------ARR11(3)                        --------->At4g35610    <---------At4g35610 --ATHB12        ------>ZmHOX2a(1)  <---------MYB59  <----------DOF2----------->RAV1(1)     <-------- >CBF --------->ANAC58<------ZmHOX2a(2)              --------------------->WRI1    <--------P   ttcatctcaagaaaatgtcctaagatcaccaaaccaaaccaaacttagggttcttctttgttctctgcttcaacagaactacagggtaagctctgttatg  24765400                    <---------YAB1                 <---------MYB52(1)                <-------GAMYB         <---------MYB52(1)   <---------At4g35610   --------->At4g35610  <-----------GT1 -MYB52(1)     ----------->GT1                                                           <-----------GT1   tctgaagctccattagtctgttatatttacatctaaattcttctcaattagccctcaaaaactccatctcagactcttatttctgcaaattttacatttc  24765500                                                                                          --------->ZAT6                                                            --------->DAG2               <---------ATHB12          <------ZmHOX2a(1)                           ----------->GT1    <-------GAMYB  ------>MYB46(1)       <-----------RAV1(2)               --------->AHL20(2)---------->DOF2              ------>MYB83-   catcttcttgcaggagtttgaaactctgtttttaagtttcagattaaacaatggaagagaaaaaagtagtaagagcgttaagcgaacacctatcactacc  24765600                                                            <----------DOF2               <-----------RAV1(1)                         <---------MYB52(1)            ------>ZmHOX2a(1)                         --------->ANAC46     <---------ALFIN1                         ----------->GT1                             <---------TOE1(3)     --------->AtMYB61                  >>>>>>>>>TBF1<-------TEIL                      ----------->HVH21  <---------ALFIN1             --------->MYB52(1)  <---------ARR14(2)                ----------->RAV1(2) ----->ZmHOX2a(1)      <--------P ------->GAMYB    --------->ARR14(2)        ----------->GT1    <----   tcctccaccatctccttctgtagcggtagccatcaacgggaagaagaagagcaaatacgtcgttttttgggctcttgagaagtttatacctgaaggtttc  24765700                                                                                                    <                                                                                                    -                                             --------->SPL7                                         <                                             -------->P                                             -                               <---------CCA1(2)   --------->ANAC58                             -----                           ----------->RAV1(2)     --------->ANAC58                  <---------YAB1 <                          ------>ZmHOX2a(1)  ------>MYB83                        --------->TOE2(3)  -                       ---------->ID1        ------>MYB46(1)               --------->YAB1   ---------  --------->GLK1(1) <-------TEIL            <---------ALFIN1              <-------TEIL   <---------AHL20(2) -------GT1  <----------DOF2 ------>ZmHOX2a(1)--------->ANAC46 <---------ANAC46<---------ARR11(3)  --   actgatttcaaattgctctatgttcgtcctcctgtctcttacatccctaccccaagtaagttgtgacttaaaaagattcataatcttataatttatgcaa  24765800  Previous    Next  AGI:  At5g61550.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G25160.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G51270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60843.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78862.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 24765328    to: 24768981    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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