Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------        --------->ARR11(3)                   <---------ZAT14                            <---------ZAT2  --------->HSFB2a(2)          --------->At4g35610           --------->ANAC46           --------->At4g35610  <---------HSFB2a(2)          <---------At4g35610  <---------MYB59---------->DOF2      ------>NtERF2 -->WOX13(1)   <---------TOE1(2)      <---------TOE2(3)      --------->ZAT6             <---------At4g35610   ccctctagatgatatcgcacgagttgattttggagcggtcgaggttgtccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagact  24761800                                                                          <---------WOX13(1)                                                                        --------->ATHB12               <---------ALFIN1                                        --------->ICU4               --------->AtMYB61     ----------->GT1                   <---------YAB1               ----------->RAV1(1) ------>ZmHOX2a(2)            <---------HSFB2a(2)            --------->AtMYB61    <---------AGP1                ------>ZmHOX2a(2)                   <-           --------->MYB46(3)    --------->ARR11(3)          <---------AGP1                        --    ----------->GT1          --------->YAB1                  --------->ARR11(3)          ----------->GT1 ------------SPL14      --------->MYB46(3)             ------->TEIL  --------->YAB1<---------MYB46(3)   gtatggaggtgaaaccaccacagttaaccaatattgatctggttacaagaacatatgcattttgatctggatgatgattgactagtggtttcagtaaata  24761900                                                      --------->ATHB12                                                     --------->ICU4                                                     <---------YAB1               <------MYB83                        --------->YAB1               <------MYB46(1)          <----------DOF2    ---------->DOF2 --------ARR11(3)      <---------HSFB2a(2)         <---------At4g35610 ------->ARR11(3)      --------->HSFB2a(2)    <---------GLK1(1)                            <---------ARR14(2)   agatgttgtttcatatttggttcttctgtaacaatttttagactttagaactctgatgattaaaagataagtttttcttataagaaaatcaagaattcgg  24762000                           --------->LBD16                        --------->MYB52(1)                       --------->MYB55(1)                       ------->GAMYB                      --------->MYB46(3)                      <---------MYB52(2)                      <---------MYB55(2)                      <---------MYB111(2)                    ----------->RAV1(1)                 --------->ANAC58   --------->ANAC46                 --------->ANAC58   --------->ANAC58                                               <-                --------->DAG2      --------->ANAC58                                      --------->MYB52(1)               ---------->DOF2  ----------->HVH21                                         ------>MYB83          --------->YAB1-------->P  --------->RAP2.6(2)  <-----------------AGL1           ------>MYB46(1)         <---------ATHB12 ------->GAMYB     --------->TOE2(3)                           --------->AtMYB61       --------->WOX13(1)<---------LBD16   ----------->GT1                              <---------MYB59   attgtttcccaatcatataaagcaacaaccggatgtgaccgcaattcgttaaaactcttatccaatcgggttatcgaaatcgaaatgaaaccaaaccgat  24762100          <------------CBF     --------->SPL7                 --------->TOE2(3)    --------->MYB52(1)              --------->TOE1(3)                       --------->AtLEC2    ------>MYB83                --------->WRKY12                   --------->ZAT14    ------>MYB46(1)           <------------CBF                     <---------ZAT14  <---------MYB59          ------------>CBF                   --------->ZAT14  ------->GAMYB       --------->At4g35610             ---------->DOF2    *TSS                   <---- ----------GT1        <---------At4g35610<---------ZAT6       <---------ZAT14      <-----------GT1   ttaaccgaaccgtattgactcatgagcagaccaattgaccttagagtcaaacagagcaaagcagagcagagcacagacatacaaatttccatttttgtag  24762200                                                                                        --------->ANAC58        --------->ZAT18                                                         ---------->DOF2        ----------->HVH21                                                      --------->At5g28300      --------->At4g35610                                                   --------->SPL7      --------->ZAT2<---------ANAC58                                       --------->MYB52(1)      <---------ZAT2<---------ANAC46            <-----------GT1           <---------SPL7--------->ANAC58      <---------At4g35610          <---------YAB1                       --------->At4g35610 -----At4g35610     <---------ANAC58         <-----------GT1            <---------At4g35610   cttcttcgagctcacagccatggcgagaagcgatgttttgatttttgtttctactcttcttctgtttctgtctctgcttacggtaagcgctcgaaatagt  24762300                                                              <--------HAHB4                                                              <---------ICU4                                                              --------->YAB1                                                             <---------ATHB12                                                        <----------DOF2                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     <---------ARR11(3)                                                     <---------ARR11(1)                                                     --------->ARR11(3)                                                     <---------ARR14(2)             ---------->DOF2                                                     --------->ARR14(2)   --------->bZIP60(1)                                                    <---------ARR14(1) ----------->HVH21              ---------->DOF2               --------->YAB1 --------->YAB1 <---------bZIP60(1)   <----------DOF2                   ----------->GT1<---------CCA1(2)--------->ANAC55(2)   tctatcttttttctctgaaagtctcaagtcgaatggaactgggaaataaaaatcggatctttaatcattttaagtgacaccagattaaaagcgttttggg  24762400                                 --------->HSFB2a(2)                                ----------------->AGL1          <---------ANAC58                  ------>ZmHOX2a(2)                             <---------ANAC58             <-------                 <---------GLK1(1)                   <-----------GT1                         <-------                 <------ZmHOX2a(2)               --------->ARR14(2)       --------------->AGL15 -----                 --------->GLK1(1)               --------->ARR11(3)      --------->YAB1      <-------                --------->ARR11(3)               <---------ARR11(3)  <----------DOF2   --------->AHL20(1)                <---------ARR14(3)               <---------ARR14(2) <---------ANAC58   --------->ARR11(3)                <---------ARR11(3)               <---------GLK1(2)  <---------ANAC58   <---------AHL20(1)   tttctacttcttggtcgagatctctctctgattttcgagattgggacaccagattttgccaaatttgagtgcttttcatattttggatatatattgcttg  24762500                        <------MYB46(1)                        <------MYB83                      <--------P                     <---------ANAC46                     <---------ANAC58                     <-------GAMYB                     <---------ANAC58                    <------MYB83                    --------->MYB55(2)                    --------->ATHB12                    --------->MYB52(2)                    <---------MYB46(3)                    <------MYB46(1)                   <---------AtMYB61                                    ------->TEIL                <-----------RAV1(1)            <---------MYB59--------->ICU4 --ANAC58  ------>ZmHOX2a(1)          --------->TOE2(3)  <---------ANAC58 --ANAC58 --------->TOE2(3)           <----------DOF2    <---------ANAC58 ---->REM1(2)  --------->ARR11(3)<---------GLK1(1)      <---------------AtSPL8                   ---- --ANAC46 --------->TOE1(3)      --------->CCA1(2)  <----------DOF2  --------->ANAC55(2)      <------   tagagattgaatccttagatgttggttggagttggatatactttaatgaactaacttttgggtactgatttatgtatttctatgctcaaatgccaaatca  24762600                                                                                     --------->At4g35610                                                                                   <--------P                                                                          <---------MYB46(3)                                                                          --------->MYB52(2)                                                                          <------MYB46(1)                                                                          <------MYB83                                                                         <---------AtMYB61     <-----                                                                       <---------ANAC46      --------                                                                       <---------ANAC58     ---------                                                                       <-------GAMYB <---------ZAT2                                                                       <---------ANAC58----------->HVH21                                                                      <---------MYB46(3)   <---------LBD16                                                                  =========================RAV ------             <-----------GT1                                      <-----------RAV1(1)<---------At4g35610    <-------TEIL                            <xxxxxxxxxxxxxxxxsmallRNA(s)<--------P<---------MYB52(1) ----->At4g35610                      <---------YAB1             ------->TEIL   <---------TOE2(3) ---ATHB12 <---------AHL20(2)----------->HVH21                <---------YAB1   <-----------RAV1(2) --   tctaaattcgtatttaaacctgcttagggacttgacaattctcatagcacaaactgttttttttatgaatgtgggttggtttcaggtagctgatgcggaa  24762700  Previous    Next  AGI:  At5g61530.1    Description:  small G protein family protein / RhoGAP family protein. similar to Os07g0486500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059663.1); similar to hypothetical protein OsI_025129 [Oryza sativa (indica cultivar-group)] (GB:EAZ03897.1); contains InterPro domain RhoGAP; (InterPro:IPR000198); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936) Range:  from: 24759274    to: 24762010    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g61540.1    Description:  L-asparaginase, putative / L-asparagine amidohydrolase, putative. Identical to Probable L-asparaginase 3 precursor [Arabidopsis Thaliana] (GB:Q56W64;GB:Q27GI5;GB:Q5M760;GB:Q9FKG7); similar to L-asparaginase, putative / L-asparagine amidohydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G16150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60829.1); contains InterPro domain Peptidase T2, asparaginase 2; (InterPro:IPR000246) Range:  from: 24762173    to: 24764750    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version