Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->ANAC58           ------->GAMYB                                    --------->ANAC58                        -          --------->MYB46(3)                       --------->HSFB2a(2)                     --------->GLK1(2)        <-----------GT1                           <---------LBD16         --------->At4g35610      <- <---------ANAC46                                ----------->RAV1(2)    --------->DAG2    <---------GLK1(2) ------>GLK1(2)                              <-----------HVH21         ---------->DOF2    <---------GLK1(1)   attctgtatataaccatcaatttcgactcaagctcaaatccaaaacctttcacctggaaaactagccattgaaaaaagctgaagcttatagggaatctca  24755800                                                                                   --------->ARR14(2)                                                                                   <---------ARR14(2)                                                                                 --------->LBD16                                                                                --------->ANAC58                                                                                --------->ANAC58    =                                                                                --------->ANAC55(1) <                                                                           <---------ETT(1)      <---                                                                           ----------->HVH21     ----            --------->YAB1                                              <---------ARR14(2)       ----           <---------YAB1                                               --------->ARR14(2)       ----         --------->YAB1                                             ------>ZmHOX2a(2)            <--- -------->ATHB12                                                 --------->YAB1<---------LBD16  <---- --------ATHB12                            --------->YAB1       <---------ATHB12--------->ANAC46<----   aatcatttgaactataatcacacgagcacatagaaacagacacaatcgcaatctaatttgatttcaatgatccaaatccgacccggaacttcaaaatcga  24755900         --------->TGA1a ==================bZIP_DOF ----------DOF2 ------ARR11(1)        --------->AtLEC2                                            <---------ZAT14 --->TEIL=============================================bZIP_DOF                     <---------ZAT18 ----->GLK1(2)    --------->ANAC58                                        <---------At5g28300 ----->ARR14(2)   --------->ANAC58--------->TOE2(3)         --------->TOE1(1)      --------->ZAT14 ------ARR14(2)   --------->RAP2.6(2)         <-----------GT1  --------->SPL7--------->LBD16 -----CCA1(2)     --------->DREB2C(2)      <----------DOF2 --------->HSFB2a(2)     --------->ZAT18 -----ARR14(1) <------ZmHOX2a(1)  --------->TOE1(3)        <---------HSFB2a(2) ------>NtERF2   atcttttactcacctcaggaccgccatgctcataaaccctaatccctttcaccatcttcttctcggacgactcttctaccgcgactgtactcagagctct  24756000                           ----------->GT1                   --------->REM1(2)                  --------->ALFIN1                 <-------MYC2                 <-------PIF5                 <-------MYC3                 ------->MYC4                 ------->PIF5                                                         <---------LBD16                 <-------MYC4                                                        <---------ANAC46                 ------->MYC3                                                     <---------GLK1(1)                 ------->MYC2                                           <----------DOF2                <---------TGA1a                                        ------>ZmHOX2a(2)                --------->TGA1a                                       <------ZmHOX2a(2)                --------->O2                                         --------->AGP1  <---------ANAC58                <---------O2                                         --------->ARR11(3)          <---                <---------ANAC55(2)                         ---------->DOF2       --------->GLK1(1)                <---------ANAC46                          --------->ANAC46  <---------LBD16      ----                <--------ABF1                    --------->ANAC58    <---------ARR11(3)   ===========                ====================bZIP_DOF     --------->ANAC58  ----------->ARR10 <---------ANAC58              <---------ALFIN1       <---------HSFB2a(2)  --------->ANAC58----------->HVH21 <-------- <---------At4g35610     ---------->DOF2 <---------GLK1(1)--------->ANAC58--------->WRKY12---------->DOF2   tacagcaaacacagtgccacgtgtagataaagaaaaactcgagaaatcggcaagacttagacgaaagttgagatctttgacgggatttcgtggaaagctc  24756100       ----------->GT1   --------->KAN4(2)          --------->GLK1(1)   --------->ARR14(2)       <---------At4g35610   <---------ARR14(2)       --------->At4g35610                            <---------YAB1  --------->HSFB2a(1)  ----------->HVH21                                   --------->ICU4  <---------HSFB2a(1) <-----------HVH21                                 --------->ICU4  <---------KAN4(1)  --------->TGA1a                                    <---------YAB1  --------->KAN4(1)  <---------bZIP60(1)                              --------->YAB1  <----------TaMYB80 <---------TGA1a                                 --------->ICU4 <---------KAN4(2)   --------->ANAC55(2)                             <---------YAB1 <---------ARR14(2)  <---------ANAC55(2)          --------->TGA1a  --------->YAB1 --------->ARR14(2)  <---------bZIP60(2)          --------->O2  --------->YAB1 ---------->TaMYB80  --------->O2                 <---------O2 --------->ICU4 ------HSFB2a(2)     --------->bZIP60(1)          <---------TGA1a <---------YAB1 ----->HSFB2a(2)     <---------O2 <---------HSFB2a(2)        <XXXXXXXXXXXXXXXXXXXXMIR414 ==============================bZIP_DOF         --------->CCA1(2) --------->ICU4      <---------WRKY38(1) -HSFB2a(1)       --------->ANAC46--------->HSFB2a(2)    ----------->TGA1--------->YAB1      ------>NtERF2   gagaatattcggtgatatagacgacgtgacagatgtccagacgcttgaagacacgagtgatgacgatgatgatgatgatgatgaagagtcaatgctgcca  24756200                                                                          --------->AHL20(2)                                                                          <---------AHL20(1)                                                                          --------->AHL20(1)                                                                          <---------ARR11(3)                                                                          <---------AHL20(2)                                                                     <-------TEIL                                                                   --------->TOE1(3)                                                                 <---------TOE2(3)                                                                 <---------TOE1(3)         <---------YAB1              <---------CCA1(2)                                 <---------DOF5.7(2)   <-----------GT1            <---------ALFIN1      <---------DAG2             ------>ZmHOX2a(1)        --------->ZAT6           <------NtERF2          <----------DOF2            <----------DOF2  <-----------GT1  <-----          <------NtERF2    ------>NtERF2              <----------DOF2------------>CBF<---------YAB1         --------->PCF2 *TSS  ------>ZmHOX2a(1)<-----------GT1--------->DOF5.7(2)  <---------ICU4   <        --------->PCF5  ------>NtERF2   <-----------GT1   ---------->ID1  --------->ARR11(3)  ------>ZmHOX2a(1)   ttttcttatggcccccatttcttctctgcctcctaactttattttctatttcccatctttgtcctttaacgttcaatatattacattatcactatcctag  24756300         --------->YAB1       <-----------TBP      <---------YAB1                                                          -   --------------->AGL15    <---------AHL20(2) <---------MYB52(1)                                   <   <---------------AGL15   <---------AHL20(2) --------->TOE2(3)                                    <- ----TOE1(2)               --------->AHL20(2)----------->GT1                                       -- -----------GT1           --------->YAB1    <---------ATHB12                  ------->TEIL   <-------   ttttactatatttataaaacacccctaattttaattccaaacacaaatcgttatttcacaaacatataagtgaaaaaatgaaactatggctaaatttaca  24756400                                                 <---------ANAC46                                                 <---------ANAC55(2)   ------>ZmHOX2a(1)             --------->ATHB51 --------->ANAC55(2)--------->ANAC55(2)   ==============================             --------->YAB1   <---------ANAC55(2)<---------O2      <---------ARR11(3) --------->AHL20(1)------->TEIL                  <---------ANAC55(1)  --------->TOE2(3) <---------AHL20(2)<---------ARR14(2)            ----------->GT1   --------->ARR11(3) --------->AHL20(2)--------->ARR14(2)            <---------ANAC58 --------->CCA1(1) -------->AHL20(2) --------->GLK1(2)       <---------YAB1     --------->AHL20(2) ---------AHL20(2) <---------ARR11(1)    <---------ICU4       <---------AHL20(2) --------AHL20(1) <---------ARR14(1)    --------->ICU4  --------->YAB1--------->TOE1(3) ------->AHL20(2) <---------CCA1(2)     <---------YAB1  ----------->GT1<---------------AGL15 ----GT1  --------->YAB1   <------ZmHOX2a(2)     <---------ANAC58 --------->RVE1(1)    <----------DOF2   aaataatttgaacaataatcgaatcttggatcatgtgatttgattattgttacgtgaatagtaaaaaaatatccttaatttagtttgaactttgaaaatt  24756500                           ----------->RAV1(1)                   <---------AHL20(2)                  <---------AHL20(2)                  --------->AHL20(2)                  <---------AHL20(1)                 <---------------AGL15               --------->ATHB51               <---------AHL20(1)               --------->YAB1               <---------ICU4                <---------At4g35610               <--------ATHB1         <---------ANAC58               --------->AHL20(2)     <---------ANAC58      --------->ALFIN1              <---------ATHB51       <-------TEIL    --------->YAB1              --------->ICU4 --------->MYB46(3)      <---------ICU4              <---------ATHB12 ---------->DOF2      <---------ATHB12   <---------YAB1             <-- ================================MADS_MADS   --------->At4g35610       <---------AHL20(2) <---------TOE2(3)   ttaaaacttatatgcaataatttttttggcaacaaaagatgcgtctcatctcaaatcatgaggtgctggtttttttattgttttcaatggctaagaatgg  24756600                                                                                               ------                                                                                               ------                                                                                     --------->TOE2(3)                                                                       <---------HSFB2a(2)    <------                                                                   <---------DAG2<---------HSFC1(2)              --------->ANAC58                                  ------->GAMYB    --------->HSFC1(2)              <---------YAB1                                    <---------ALFIN1 --------->HSFB2a(1)              --------->ANAC58                                 --------->MYB46(3)--------->KAN4(1)         --------->GLK1(1)                                     <---------MYB55(2)<---------KAN4(1)         <---------GLK1(1)                                     <---------MYB111(2)--------->KAN4(2)   <---------ANAC58                           <---------ANAC58------>MYB46(1)    <---------HSFB2a(1)   <---------ANAC46              ------>ZmHOX2a(1)    ---------->DOF2  --------->HSFB2a(2)    -------   <---------ANAC58 <---------ANAC58          <---------ANAC58-------->P --------->ATHB12    <------- -------MYB46(3)    <---------ANAC58        <---------ATHB12  ------>MYB83      <---------KAN4(2)   tggtttcttggatatcacgcttgctcgtcattctcctccaaaaccaatgcttctcccaaagtccaaccaccttctcgattggaacattcttagtctccgg  24756700  Previous    Next  AGI:  At5g61510.1    Description:  NADP-dependent oxidoreductase, putative. similar to oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT4G21580.1); similar to Ted2 [Vigna unguiculata] (GB:CAA69914.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085) Range:  from: 24754171    to: 24756224    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g61520.1    Description:  hexose transporter, putative. Identical to Sugar transport protein 3 (STP3) [Arabidopsis Thaliana] (GB:Q8L7R8;GB:Q9ZS56); similar to STP1 (SUGAR TRANSPORTER 1), carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT1G11260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60846.1); similar to putative hexose transporter [Vitis vinifera] (GB:AAT09978.1); contains InterPro domain General substrate transporter; (InterPro:IPR005828); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Sugar transporter, conserved site; (InterPro:IPR00582 Range:  from: 24756252    to: 24758499    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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