Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      >                                                                                               <-----                                                                                       <---------ATHB51                                                        --------->TOE2(3)              --------->ICU4                                          --------->GLK1(2)                   --------->AHL20(1)    >                                       <---------TOE2(3)--------->TOE1(3)     <---------ARR11(3)  <-- ---------GT1               <-----------RAV1(1)      <-----------GT1    ----------->RAV1(1)    ------   ttacaaaatgtgtttgacaacatttttgttttgttgttgttaagaatatgtggttttaccttcatattagattgcaacaatatactacaattatgcaaat  24724300                                                                           --------->DEAR3(1)                                                                           ----------->HVH21                                                                           --------->MYB46(3)                                                                        ----------->HVH21                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                <-------MYC3                                                                ------->MYC3                        <        <---------AHL20(2)          <------ZmHOX2a(1)          <---------ANAC55(2)      --------->YAB1 >>>>>>>>ARR2                --------->TOE1(2)                 --------->ANAC55(1)     --------->ICU4 ----ARR14(2)          <---------MYB59                       <---------ALFIN1          <---------ATHB12 >>>>>>>>ARR1         --------->ANAC58                     ----------->RAV1(1)     <<<<<<<GRF7   <--- -------YAB1          --------->ANAC58                   <---------At4g35610     ----------->HVH21  < --->ARR14(2)       <------ZmHOX2a(1) ---------->DOF2    --------->At4g35610------>NtERF2    <-------   acgattgtatataaactaagtaggacccaatccaacgaggaaaagcctcatacacagtcagcaacacgtttcatgcgacgaccctgacaatgatgttttt  24724400                                     <-------TEIL                                    --------->CCA1(2)                                   --------->ARR11(1)        --------->ANAC46 <------ZmHOX2a(1)      <-----------GT1   <----------ID1    <-----------GT1--------->YAB1  --------->ARR11(3)        --------->ICU4                     ----- ----------DOF2 <-----------------AGL1                       <---------AHL20(2)                 <---- --------GT1------>ZmHOX2a(1)    <---------------AtSPL8      --------->AHL20(2)                ------ ---------DAG2<----------DOF2  ---------->DOF2 <---------ICU4<---------ATHB51<---------ANAC46-------- -----------------ANAC81----------->GT1----------->GT1---------->DOF2  <---------AHL20(2) --------->YAB1   tacttttttcactcctctttctcataaggaaaaaaaagatacagaaaaatcattttcaaagaaataattctgttttatttagtggataagtttgataatc  24724500                          ------>ZmHOX2a(2)                         --------->GLK1(1)                         <------ZmHOX2a(2)                        <---------ARR14(3)                        --------->ARR11(3)                        <---------ARR14(2)                        <---------ARR11(1)                        --------->ARR14(3)                        <---------ARR11(3)                        --------->ARR14(2)                                <---------AHL20(2)                        <-----------ARR10           --------->YAB1        --------->ATHB12                       <---------ARR14(1)    ----------->GT1             <---------AHL20(2)                       <---------CCA1(2) --------->MYB46(3)           <---------ICU4                      --------->LBD16 <---------WRKY45                <---------AHL20(2)                    <---------LBD16   <---------WRKY38(1)             --------->ATHB51    --------->YAB1--------->GLK1(2)   <---------WRKY12         ----------->GT1 ---->YAB1    <---------ANAC55(2)    --------->WRKY18(1) <---------YAB1  --------->AHL20(2)       --- -----ICU4    --------->ANAC46     <------MYB46(1)  <---------ICU4<---------AHL20(2)              --- --->ICU4     --------->ANAC55(2)  <------MYB83  --------->WOX13(1)   --------->AHL20(2)       ------ ->YAB1       --------->ANAC55(1)<---------WOX13(1)<---------ATHB12  --------->ICU4    <-------TEIL--   atgaaatcatagtaacacataatccggatcttcagattggtcaacaattgttaatcactatgagtgagttaattatttattagcacaagttcgtaatcaa  24724600                                                                          ----------->GT1                                                                        <---------ANAC46                                                                     <---------SPL7                                                                    --------->AtMYB61                                                                    <---------DAG2                                                                  ------>MYB83                                          --------->ARR11(3)      ------>MYB46(1)           <---------GLK1(1)              --------->GLK1(2)     --------->MYB46(3)          <---------ARR14(2)              <---------ARR11(3)  --------->PCF2          --------->ARR14(2)             --------->RVE1(1)   <------ZmHOX2a(1) ---->GAMYB--------->CCA1(2)           --------->AHL20(2)  --------->ANAC58 -------->GT1                   ----------->GT1   ----------->GT1<---------ALFIN1 --->MYB52(1) <---------LBD16  --------->DAG2  <------------CBF <---------MYB59 ------->At5g28300            ---------->DOF2<---------YAB1--------->ANAC58                ----------   cggtgaaaaatggatatggggaatggaatggataaagtcaaaaaaatctaattggataaacaaggacccaccttacgagtaaattccagttttgtcttaa  24724700                          *TSS                  --------->ARR14(2)                            --------->DAG2                   ----                  <---------ARR14(2)                           ---------->DOF2              ------>ZmHOX2a(1)                  --------->MYB52(1)                    ----------->GT1                 <-----------GT1 ----------->RAV1(1)--------->ZAT6                 <---------ETT(2)        <----------DOF2 --------->TOE2(3) >ID1          --------->ANAC46--------->ZAT14     --------->ETT(2)        <---------DAG2---------->ID1   aaacaacacaagtttctgcgtaactgtacaaagtgttctcttccaatttgatgtcgagaggtcaataaagtgatgagctttttgtgattttttcctcatt  24724800                <-----------GT1           <----------DOF2       <---------ZAT18                                          ------>ZmHOX2a(1)   <---------ICU4                                              --------->TOE2(3) --------->GLK1(2)                                         <----------DOF2 <---------ARR11(3)                                    <---------ZAT18 <-----------ARR10                               <---------ANAC58 --------->ARR11(3)     ------>ZmHOX2a(1)     <----------DOF2  --------->TOE1(3) ----->YAB1<---------DAG2     --------->TOE2(3)  <---------ANAC58           ----------->HVH21  <-----   caaaatctttgcactttttcactctccttcaatctcaaatttctgagtctttcttggttcactttccttaaacacgatttgacatggatgcaatttcatc  24724900                             <-----------GT1         --------->YAB1                      --------->LBD16               <---------ATHB12                 --------->ATHB12                    <---------LBD16               --------->WOX13(1)         <---------YAB1        << ----CCA1(2)     <----------DOF2               --------->GLK1(2)         <---------MYB52(1)     <----   tcttggaaccaattgtgttctttctggggtttctccattttcacaagagaatcaatcaaaatcgaaactttctccgtttatgagtcttgatttgaaggaa  24725000                             ------>MYB83                           ------->GAMYB                           --------->AtMYB61                           <---------MYB59                          --------->MYB46(3)                         ------>MYB83                         -------->P                         ------>MYB46(1)                        --------->MYB55(1)                       <---------MYB111(2)                       --------->DEAR3(1)                       <---------MYB46(2)                       <---------MYB111(1)                       --------->AtMYB61                      --------->MYB46(3)                 <---------GLK1(1)                 --------->GLK1(1)                <---------ARR14(2)                                   --------->ANAC58            <---------At4g35610 --------->TOE1(3)                    --------->ANAC58            --------->At4g35610 --------->TOE2(3)     ------>ZmHOX2a(1)          <-----------RAV1(2)------>MYB46(1)          <---------At4g35610       <---------ANAC58--------->MYB46(3)<---------DAG2          ------>ZmHOX2a(1)       <---------ANAC58<---------MYB55(2)<----------DOF2  <---------ANAC58                    <------ <<<<<<<<<<<<<<<LFY <-----------GT1  <------------MYB.PH3(1) <---------ARR14(2)          <---------ARR11(3) -----KAN4(2)   <-----------ARR10    --------->MYB46(3)   <---------ANAC58               --------->ARR11(3)   catccaatggcttcagcagatttcaccaaccaaaccttaaccgctttctcttcttcctctgcgtctcctgtaagcaaaaacaaaaaacaaacatctcttt  24725100                                                                         --------->ANAC46                  <----------DOF2                                        --------->ANAC58               <---------ARR11(3)                                        --------->AtLEC2       <----               --------->ARR14(2)                                        --------->ANAC58   <------MYB83               <---------ARR11(1)              <---------ANAC58        <-----------RAV1(2)  <------MYB46(1)     <----------DOF2                           <---------ANAC46   --------->MYB52(2)      <---------WOX13(1)     --------->TOE2(3)     <----------DOF2     <---------ANAC58 <--------P  ---------->DOF2xxxxxxxxxx ---------->ID1<---------ARR14(2)          <---------WOX13(1)   <---------MYB52(1)      --------->ATHB12 ----DOF2     <---------CCA1(2)   <---------GLK1(2)           ----------->GT1    <xxxxxxxxxxxxxxxxsmallRNA(i)   tttgtttctttaatccaaatctttggtgactttatagattccctaattgacttgtgtttgaaaatggttagtttcaggcaaagacatcatcgattggtat  24725200  Previous    Next  AGI:  At5g61440.1    Description:  thioredoxin family protein. Identical to Thioredoxin-like 3, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9XFI1); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT1G08570.2); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT1G08570.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64194.1); contains InterPro domain Thioredoxin family (InterPro:IPR015467); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin Range:  from: 24724726    to: 24726119    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version