Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      ------->GAMYB                        <---------------AGL15    --------->TOE2(3)                    <---------HSFB2a(2)                             <---------DAG2    --------->TOE1(3)       --------->YAB1 --------->REM1(1)                             <----------DOF2 -ALFIN1             <---------YAB1      --------->HSFB2a(2)                ----------->GT1   <------ >ANAC46            <---------ARR11(3)   --------------->AGL15   ------->TEIL     <-----------GT1   <   tttcaaccctaatcagacacaatatgtttatcagaacaattttctacaacaagtacaaaaatgagtgtatgtatagatttgtataaaccagctttttggg  24707900          <---------ATERF1(1)         --------->ANAC58         --------->ANAC58        <---------ALFIN1        --------->DEAR3(1)       --------->ATERF1(1)       <------NtERF2                                           <---------AtMYB61                   --      ------>NtERF2                                            --------->ALFIN1                 -----     --------->ANAC58                                       <---------DEAR3(1)                  -----     --------->ANAC58      <---------MYB46(3)           ------>ZmHOX2a(1)                       -----     --------->ANAC46      <---------ANAC46          ---------->ID1                           ------>NtERF2   <---------ANAC58    --------->ALFIN1          <---------ANAC58                            --------   <---------ANAC58  --------->DEAR3(1)          <---------ANAC58                            -------- <-----------HVH21--------->ANAC46               <---------ANAC46                   --------->ANAC58 ---LBD16------>NtERF2--------->LBD16          --------->GLK1(2)<---------MYB46(3)  --------->ANAC58 -----------RAV1(1)  <---------ANAC46   --------->CCA1(2)  ------>ZmHOX2a(1)<----------DOF2  --------   gaatgtcgcgccagcctccctcgccgtggtcgtggatgtaagagatgagtttcttgtcctcctcggtggtccatgctcctttcttcaagccttctccgac  24708000                                              <---------ANAC58       <----------DOF2                        <---------ANAC58      <---------ANAC58                        ----------->GT1      <---------ANAC58                        <---------ANAC55(2) --------->RAV1(1)                            <---------ANAC46 ---->ANAC46                              --------->YAB1 ---->ANAC58                              <--------ATHB1                                       ------ ---->ANAC58                             <---------ATHB12        <-----------GT1      --------->CCA1(2) ->ANAC46 <---------ANAC58               --------->ICU4     <---------YAB1--------->ANAC46 <------ZmHOX2a(1) ->DEAR3(1)            <-----------GT1   <---------ATHB51   --------->AHL20(2)       --------->ARR11(3) --->HVH21<---------ANAC58             --------->YAB1       <---------AHL20(2)       <---------ARR11(3)   gcaacatggctttcttgacattgtttttcgatatagatgaacaataatgcgtaaaatttcatataattaacctctcacaaaactcaagatataggaacag  24708100                                                                       <------ZmHOX2a(2)                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)                                                                      <---------AGP1                                                                      --------->AGP1<---------GLK1(1)                                                            ---------->DOF2     --------->YAB1                                                         <------ZmHOX2a(1) <---------MYB52(1)                                                         =====================HOX2a_HOX2a                            --------->GLK1(2)            ======================HOX2a_HOX2a                     ----------->GT1                   <---------TOE2(3)------>ZmHOX2a(2)      ------                    --------->DAG2           <---------AHL20(2)       <---------ARR11(3)       <----- ----->GT1         ---------->DOF2       ----------->GT1<----------ID1--------->ARR11(3)    <-------TEIL   agaaaaactatatatgttcaaaaaagtaaaattctgaaggaaattgtttaatcagataaggaaaaagaaacagatctgttaatgagaactctgatacatc  24708200                                                  <---------ANAC55(2)                                                  <---------ANAC58                                                  <---------ANAC46                                                  <---------ANAC55(1)                                              <---------At4g35610                                           <---------At4g35610                                           <---------ZAT2                             --------->ARR11(3)   <---------ANAC58                             <---------ARR11(3)   --------->ANAC55(2)          <---------ARR11(3)                         <----------DOF2   --------->At4g35610                 --------->ARR11(3)             ------>ZmHOX2a(2) ------>ZmHOX2a(2)  --------->O2               ----------->ARR10      ------->TEIL  <---------ALFIN1   <---------ALFIN1             <---------TOE2(3)       --------- --->At4g35610--------->HSFB2a(2)    <---------ALFIN1         --------->AHL20(2)          --------->AHL20(2) ----At4g35610<---------HSFB2a(2)   --------->MYB46(3)        <---------AHL20(2)        --------->AHL20(2)   tgaatatgaaactgatcgagaaacaccctttgatcttacccacactgctgctacgtgttttcatttttttaacgcagagtagattttaaaaaaaatatat  24708300                                                                                           <---------RVE1(1)                                                                                 --------->ANAC46                                                                                 <---------ANAC55(2)                                                                                 --------->ANAC58                                                                                 --------->ANAC55(1)                                                                                 --------->ANAC58                                                                                 --------->ANAC55(2)                                                                                <---------TOE2(2)                                                                                --------->SPL7                                                                                ------->TEIL                                                                                <-------TEILxxxxxxxxx                                                                             --------->ANAC58                                                                             --------->ANAC58                                                                             --------->ANAC46<-------                                    <-----------RAV1(1)                     --------------->AtSPL3                     *TSS       <---------GLK1(1)                           <---------------AtSPL3         --------->HSFB2a(2)  --------->ATHB12                       ----------->TBP       <---------CCA1(1)         <---------HSFB2a(2) <---------YAB1  <---------MYB46(3)      --------->AHL20(2)   <---------ARR11(3) >AHL20(2)   ---------->DOF2 --------->ICU4 <---------ZAT6         <-----------TBP        --------->ARR11(3)   gttataagcttatggaaaagaaccaagaggcatgatttctgtggtagtggtgaggttatgagctattccatatatatacacgtacgtaatgagatttttt  24708400                                             <---------AHL20(2)                                             --------->AHL20(2)                                            <---------AHL20(2)                       <---------DAG2                 --------->ANAC46           <---------AHL20(1)                 ----------->GT1                 --------->ANAC58<---------TOE2(3)                      <------ZmHOX2a(1)                 <---------ANAC55(2)     <---------AHL20(2)             --------->YAB1                 --------->ANAC58<---------YAB1  --------->AHL20(2)    ----------->GT1                 --------->ANAC55(2)  ----------->GT1    <------ZmHOX2a(2)     <---------ANAC55(2)                 --------->ANAC55(1)<--------P   <---------AHL20(2) ---------->DOF2  <----------DOF2 xxxxxxx>smallRNA(i)      <---------ARR11(3)--------->AHL20(2)----------->GT1  --------->ANAC55(2) <- --AHL20(2)      ----------->GT1 <---------TOE1(3)       ======================HOX2a_HOX2a   --------   tttttttttttttgtgaaaacgtaacaagatagttatggttagtaaattatttaaatagatcaatagttaaaaaggataattcgtaacttttctatgaaa  24708500                                                                                             <-------                                                      --------->AHL20(2)                 --------->AHL20(1)                                                      <---------AHL20(2)                 <---------ARR11(3)                                                 <---------RVE1(1)            <---------TOE2(1)   <--                                          <----------DOF2                     <---------TOE1(1)   ---                                        <---------TOE1(2)                    --------->SPL7 ---------            --------->ALFIN1           ------>ZmHOX2a(1)                   <---------SPL7--------->AHL20(2)         --------->DAG2<---------------AtSPL8   <---------MYB52(1) <---------ZAT18       <---------AHL20(1) --------ICU4  <---------ANAC46    <-----------GT1   <---------AHL20(2)   <---------DEAR3(2)<-------- ->YAB1 ---------->DOF2--------------->AtSPL8 <---------TOE1(3) ---------->DOF2     <-------TEIL <---   ataatgtccgaaaagtggtgtttgtatagtactatattttcctactttcaggtattttaaatacggtaatgcgcttcggtacgagatgcaatattttaat  24708600       --------->ANAC58                                                    --------->ATHB12       --------->ANAC55(1)                                                 <--------ATHB1       --------->ANAC46    <---------ANAC58                               --------->ICU4       --------->ANAC58  --------->ARR11(3)                               <---------YAB1       <---------ANAC55(2) <---------ANAC58                       --------->AHL20(2)       --------->ANAC55(2)<-------TEIL                            <---------AHL20(2) --AHL20(2)            <------MYB83              <----------DOF2  --------->AHL20(1) -------AHL20(2)       <------MYB46(1)        <-----------GT1    --------->AHL20(2) ------>AHL20(2)     <--------P     --------------->AtSPL8  --------->AHL20(2)      ----------->RAV1(1) >AHL20(2)  --------------->AtSPL3  <---------------AtSPL8  <---------AHL20(2)    ------>ZmHOX2a(2) -AHL20(2) <---------DOF5.7(2)    --------->ARR14(2)       --------->AHL20(2)<---------WOX13(1)    <- ------AHL20(2) ------->TEIL      <---------ARR14(2)      <---------YAB1 <---------WOX13(1)     -----   ttatatatcacgtaaacgtacctgtaggttcttgcatatttgtacatttaacttttggttattaaaaaaaaattgaatgattgatccaacatggagagtt  24708700                                                                              <---------CCA1(1)                                                                              <---------RVE1(1)                                                                             --------->ARR11(3)                                                                             <---------ARR14(2)                                                                      <----------DOF2                                                                   <---------ARR11(3)                                           <---------TOE2(3)       --------->ARR11(3)           --------->MYB52(1)         <----------DOF2             <---------CCA1(2)          <-------           ---------->DOF2    --------->AHL20(2)              --------->AHL20(2)             -------- ----------->GT1             <---------AHL20(1)               <---------AHL20(2)         ----------->GT1 --------ANAC46              --------->AHL20(1)            <---------AHL20(2)<---------ARR11(3) ---->ALFIN1                --------->AHL20(2)            --------->AHL20(2) --------->ARR14(2)   ggaggggaataactaaagggacgtttgcaaatatatataacttttaagaattcgattgtattatatatatatctttgcagatatttttgtattgtttaaa  24708800  Previous    Next  AGI:  At5g61420.1    Description:  MYB28 (MYB DOMAIN PROTEIN 28); DNA binding / transcription factor. similar to MYB29 (myb domain protein 29), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G07690.1); similar to unknown [Picea sitchensis] (GB:ABK26515.1); similar to GHMYB25 [Gossypium hirsutum] (GB:AAK19616.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 24706377    to: 24708321    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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