Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                           <---------ANAC46                                                                                       --------->ZAT2                                                                                       --------->At4g35610                                                                                       <---------At4g35610                                                                                       <---------ZAT2                                                                                      ------->TEIL                                                                                   --------->bZIP60(2)                                                                                   --------->ANAC58                                                                                   ==================                                                                                   <---------ANAC55(2)                                                                                   --------->ANAC46                                                                                   ==================                                                                                   <---------O2                                 --------->ANAC58                                  --------->ANAC55(2)                                 --------->ANAC55(2)                               --------->TGA1a                                 --------->ANAC58                                  <---------TGA1a                                 --------->ANAC46                                  --------->O2    --                                 <---------ANAC55(2)                              ------>NtERF2    ==                                <---------LBD16                                  <---------ALFIN1----                          --------->CCA1(2)            <---------DEAR3(1)       <------NtERF2 -------                       <---------TOE2(3)           <---------LBD16             <-----------------PIF3(1)              <-------GAMYB ----------->HVH21   --------->GLK1(2)             --------->RAP2.6(2)<---      <----------ID1   ----------->ARR10       <---------GLK1(2)    <---------LBD16--------->ANAC58--   agaacagagcgacgagcgttggaataagatttgacacgggatggatgaagaatctcggaggtgagattacgacggagaagtcgccacgtagctccgtatg  24673500                                                      <---------MYB52(1)      <---------ANAC46                                                    --------->DEAR3(1)       --------->RAP2.3(1)              <-----------RAV1(1)               --------->ATERF1(1)          --------->DEAR4(2)              --------->ALFIN1                  <---------ABI4(2)            <------NtERF2            <---------ANAC58                   <---------ATERF1(1)           --------->ATERF1(1)            <---------ANAC58                 <------ZmHOX2a(1)              --------->ABI4(2)      ----------->HVH21                      ========================HOX2a_HOX2a    <---------At4g35610                     <------MYB46(1)                 <---------RAP2.3(1)    <---------ZAT2 <-------GAMYB            <------MYB83<---------MYB46(3)  ------>NtERF2    --------->At4g35610                 --------->LBD16--------->ALFIN1     <---------ATERF1(1)    --------->ZAT2<---------MYB46(3)   --------->HSFB2a(2)                 --------->DEAR3(1) ------>ZmHOX2a(1)--------->MYB52(2)   <---------HSFB2a(2)                 <---------DEAR3(1) >LBD16     <---------ANAC46          <---------LBD16<---------DEAR3(2)   --------->RAP2.3(1) ======================MYC_MYB     <----------DOF2  <---------ATERF1(2)   --------->ATERF1(1) ======================MYC_MYB  <-----------ARR10--------->DEAR3(1)      <---------ATERF1(1) --------->RAV1(2)<------MYB83  <---------ARR11(3)  --------->ATERF1(2)  <---------RAP2.3(1) =========================RAV   --------->ARR11(3) <------NtERF2     --------->GLK1(2) ----->ARR11(3)   <------MYB46(1) ==================HOX2a_HOX2a      --------->ARR14(2) -->SPL7 <---------AtMYB61 <---------ZAT6<---------MYB52(1)   <------ZmHOX2a(2) ------ARR11(3)<-------GAMYB--------->YAB1<--------P<---------DEAR3(1)  --------->ANAC46      <------ ---->ZmHOX2a(2) <---------AtMYB61------>ZmHOX2a(2)<---------LBD16   <---------ARR14(2)       <------   atcctgagctgatggtgtgttggttactagtgatgatctttccggtaggaagcgccggtggacgatcagagaatacggcgccgtttaaaacaagagcctt  24673600                                                                                    <---------At4g35610                                                                             <---------MYB46(3)                                                                            <---------ANAC46                                               --------->LBD16            --------->MYB55(2)                                              <---------ANAC46            <---------MYB46(3)         <---------KAN4(2)                 --------->ARR11(1)      ----------->HVH21--------->At4g35610      <---------MYB52(2)               ---------->DOF2     <---------WOX13(1)--------->MYB55(2)     --------->ANAC46              --------->ANAC58     --------->ICU4   <---------DEAR3(1)     --------->ANAC58              --------->ANAC58     <---------YAB1<---------DEAR3(1)     --------->ANAC58           ----------->HVH21     <---------At4g35610<---------AtMYB61    <------ZmHOX2a(1) ---ANAC58   <------ZmHOX2a(2) <------NtERF2 <---------LBD16      <------NtERF2    <---------ANAC46 ---ANAC58  <-----------HVH21<---------ANAC46<-------TEIL--------->ATHB12--------->ALFIN1  --------->CCA1(2)   gtgagccaaggaacgatcagagacgaagatggcagggacggaaaagatgcggagagagatgattgggccgagacggtggtggatggagcggagataggag  24673700                                                                                              -------                --------->MYB52(1)                                                          ---------                <---------WRKY18(1)                                 --------->ALFIN1        <--------               ----------->HVH21           --------->ALFIN1      <---------TOE2(2)    --------->MYB52(2)               --------->WRKY12   <---------PCF5             <-------TEIL<------ZmHOX2a(1)  <--------   <---------ATHB12   ------>NtERF2  <-----------RAV1(2) <---------TOE1(3)          <---------MYB52(1)   tagaaatcatcgaagccttgacggagccactggaagggaccaggcatggggaagaagttagggttcggaggtagaggaagattgttgttagttctgcgga  24673800                                 --------->ANAC58     --------->CCA1(2)           --------->ANAC58                <---------ANAC58    <---------ARR11(3)         --------->CCA1(2)                 <---------ANAC58    --------->ARR11(3)    ---------->DOF2                        <---------ANAC46 -->LBD16         --------->WRKY12                     <---------ETT(2) >At4g35610       --------->WRKY38(1)     ----------->GT1<------NtERF2             <---------DAG2 -At4g35610     <---------At4g35610  <---------At4g35610------>NtERF2              <----------DOF2 <- -LBD16         --------->At4g35610<-----------RAV1(2) --------->ETT(2)   <----------DOF2       <----   agaagagatatagaaggaagttgactgtgaaagagacgcagaagatgtgaaaccatgtcgccatttttcttgtattctttctctgctttttttttgttat  24673900        --------->HSFC1(2)        <---------HSFB2a(1)        --------->HSFB2a(1)                                                                     -----        <---------HSFC1(2)                                     ----------->HVH21                <----      <---------GLK1(2)                                      --------->YAB1                <---------AHL20(2)      --------->ARR14(2)                                     <---------ANAC58              --------->AHL20(2)     <------ZmHOX2a(1)                       <---------At4g35610                           <---------   <---------TOE2(3)       <-----------TBP   --------->At4g35610                       <---------AHL20(2) ---------DOF2           <---------------AGL15   ------------>CBF         --------->YAB1 <-----------TBP -----YAB1    ------>ZmHOX2a(1)      <---------GLK1(2)       <---------ANAC58 <-----------GT1  <-----   gcttttaggattcttcctcttgaattcgtatatatagcaaattcttcagataacaatttgctatcgtgacgctcaagtataaactgtttttatttatata  24674000                                                                                          --------->LBD16                                                                                     <---------ZAT2                                                                                     --------->ZAT2                                                                                    ------>MYB83                                                                               --------->ANAC58                                                                               --------->ANAC58                                                                               --------->ANAC46                                                                  <----------DOF2   --------->ANAC58                                                   --------->ARR14(2)        <---------ALFIN1                                                 <---------ARR11(3)         <------NtERF2<---------ANAC46                                                 --------->AHL20(1)        ------>NtERF2<---------LBD16 ---->ARR11(3)                                   --------->ARR11(3)        ----------->RAV1(1)  ----- -----ARR11(3)                          <------------CBF         <---------ANAC58   ------>MYB46(1) --TBP                                 --------->ATHB12          <---------ANAC58   --------->ANAC58 ----CCA1(2)  ----------->GT1      ----------->GT1 <---------ARR14(2)     ----------->HVH21   -------   tctatagttcggaagacagataatttagaaataagtttggataattgaaaatatatccgatttgtttgcttcttgggcgacacaccaagctccggagaaa  24674100       ------>ZmHOX2a(2)                                         --------->bZIP60(1)      <------ZmHOX2a(2)                                          <---------TGA2(1)     --------->ARR11(3)                         ----------->RAV1(1)     <---------ARR11(3)                    --------->AtMYB61     <---------bZIP60(1)          <------ <-----------GT1                          <---------MYB52(2)     --------->TGA2(1)          <-------- ------>GT1      <---------ANAC46    --------->ANAC46  ------->TEIL         <----------DOF2<---------AHL20(2) --->DOF2 <----------DOF2 <-------TEIL  --------->TOE2(3)     ----------->HVH21       <---------AHL20(2)   gttatacgatctctttgctacgtttagcttcattactccaaaccacaaacccacatgaatttttgtgacatcatcgaacttttgtgatttttttttattt  24674200                                                         ---------->DOF2                                                       --------->YAB1                                                      <---------ATHB12                                                  --------->MYB46(3)                                                  <---------MYB55(2)                                                  <---------ATHB12                                                 --------->ANAC58                                                 ------>MYB46(1)                                                 ------>MYB83                                                --------->MYB55(1)                                               <---------MYB46(2)                               <---------ARR11(3)--------->ANAC58                               --------->ARR11(3)-------->P                              <---------CCA1(2)<---------MYB111(1)                         ----------->GT1       --------->DEAR3(1)                                ----                    --------->YAB1             --------->AtMYB61                                 ----                   <---------ATHB51            <---------MYB111(2)                               <---       <----------ID1  --------->YAB1          --------->MYB46(3)                                <---     ---------->DOF2<---------ICU4             <---------MYB55(2)                               <----   --------->ARR11(3) <---------YAB1          --------->MYB46(3)     <---------ARR11(3)         ----- ---YAB1           --------->ICU4     --------------->AtSPL8         --------->ARR11(3)  ----------->GT1 -AHL20(2)         <---------ATHB12-------->P--------->ANAC46   <---------ATHB12    ---------->DOF2   ttgaagataaagacaagttcaattatgatgttatatctaccaagtaccaccaaccaatgaaaagaaatcaagatttcaagtagaataaaagtagataaat  24674300           <---------YAB1         --------->YAB1   --------->ANAC55(2)   <---------ANAC55(2) --------->AHL20(2) <-----------GT1 ----->AHL20(1)                                     <-------GAMYB ----->AHL20(2)                                    <---------ANAC46 ------AHL20(2)                                    <---------ANAC58 ------AHL20(1)                      <---------ANAC55(2)     --------->YAB1                 <-------- -----AHL20(2) --------->KAN4(1)     --------->ANAC55(2)  --------->WOX13(1)               --------->AHL20(2) ---->AHL20(2)<---------YAB1    <---------ZAT6     <---------ANAC58               <-----------GT1   aaattacataatgaagattattcatccaactcttgtgttacttaatactcgtttcgttgttaatcaaaaatttcatttggattttaacaaaaattaacta  24674400  Previous    Next  AGI:  At5g61320.1    Description:  CYP89A3 (cytochrome P450, family 87, subfamily A, polypeptide 3); oxygen binding. similar to cytochrome P450, putative [Arabidopsis thaliana] (TAIR:AT2G12190.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96947.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) Range:  from: 24672324    to: 24673864    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g61330.1    Description:  rRNA processing protein-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO70562.1); contains InterPro domain TRAUB; (InterPro:IPR012617) Range:  from: 24674374    to: 24678247    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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